Expanding the transfer entropy to identify information subgraphs in complex systems

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS

Volumn , Issue , 2012, Pages 3668-3671

  Stramaglia, S ^a   Wu, Guo Rong ^b,c   Pellicoro, M ^a   Marinazzo, D ^b  

^a UNIVERSITY OF BARI   (Italy)

^b GHENT UNIVERSITY   (Belgium)

^c UNIVERSITY OF ELECTRONIC SCIENCE AND TECHNOLOGY OF CHINA   (China)

Author keywords

[No Author keywords available]

Indexed keywords

DATA SETS; SUBGRAPHS; TRANSFER ENTROPY;

ENGINEERING; INDUSTRIAL ENGINEERING;

ENTROPY;

ARTICLE; ELECTROENCEPHALOGRAPHY; ENTROPY; HUMAN; INFORMATION SCIENCE; NUCLEAR MAGNETIC RESONANCE IMAGING;

ELECTROENCEPHALOGRAPHY; ENTROPY; HUMANS; INFORMATION THEORY; MAGNETIC RESONANCE IMAGING;

EID: 84870776361     PISSN: 1557170X     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/EMBC.2012.6346762     Document Type: Conference Paper

References (24)

1. A. Borst, F.E. Theunissen, "Information theory and neural coding" Nat. Neurosci. 2, pp. 947-957, 1999.
2. E. Schneidman, W. Bialek, M.J. Berry II, "Synergy, redundancy, and independence in population codes" J. Neuroscience 23, pp. 11539-11553, 2003.
3. L.M.A. Bettencourt et al., "Functional structure of cortical neuronal networks grown in vitro" Phys. Rev. E 75, pp. 21915-21924, 2007.
4. R. Milo et al., "Network Motifs: Simple Building Blocks of Complex Networks" Science 298, pp. 824-827, 2002.
5. E. Yeger-Lotem et al., "Network motifs in integrated cellular networks of transcription-regulation and protein-protein interaction" Proc. Natl.Acad. Sci. U.S.A. 101, pp. 5934-5939, 2004.
6. L.M.A. Bettencourt, V. Gintautas, M.I. Ham, "Identification of Functional Information Subgraphs in Complex Networks" Phys. Rev. Lett. 100, pp. 238701-238704, 2008.
7. T. Schreiber, "Measuring Information Transfer" Phys. Rev. Lett. 85, pp. 461-464, 2000.
8. C.W.J. Granger, "Investigating causal relations by econometric models and cross-spectral methods" Econometrica 37, pp. 424-438, 1969.
9. K.J. Blinowska, R. Kus, M. Kaminski, "Granger causality and information flow in multivariate processes" Phys. Rev. E 70, pp. 50902-50905(R), 2004.
10. D.A. Smirnov, B.P. Bezruchko, "Detection of couplings in ensembles of stochastic oscillators" Phys Rev. E 79, pp. 46204-46212, 2009.
11. M. Dhamala, G. Rangarajan, M. Ding, "Estimating Granger Causality from Fourier and Wavelet Transforms of Time Series Data" Phys. Rev. Lett. 100, pp. 18701-18704, 2008.
12. D. Marinazzo, M. Pellicoro, S. Stramaglia, "Kernel method for nonlinear Granger causality" Phys. Rev. Lett. 100, pp. 144103-144107, 2008.
13. A. Porta et al, "Information Transfer through the Spontaneous Barore-flex in Healthy Humans" Methods of Information in Medicine 49, pp. 506-510, 2010.
14. W.J. McGill, "Multivariate information transmission" Psychometrika 19, 97-116 (1954).
15. L. Barnett, A.B. Barrett, and A.K. Seth, "Granger Causality and Transfer Entropy Are Equivalent for Gaussian Variables" Phys. Rev. Lett. 103, pp. 238701-23704, 2009.
16. Z. Shehzad et al., "The Resting Brain: Unconstrained yet Reliable" Cerebral cortex 19, pp. 2209-2229, 2009.
17. N. Tzourio-Mazoyer et al., "Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain" it Neuroimage 15, pp. 273-289, 2002.
18. M.D. Fox et al., "The human brain is intrinsically organized into dynamic, anticorrelated functional networks" Proc Natl Acad Sci U S A. 102, pp. 9673-9678, 2005.
19. R. Salvador et al., "Neurophysiological Architecture of Functional Magnetic Resonance Images of Human Brain" Cereb. Cortex 15, 1332-1342, 2005.
20. R. Leech, R. Braga, and D. J. Sharp, "Echoes of the Brain within the Posterior Cingulate Cortex" The Journal of Neuroscience 32, pp. 215-222, 2012.
21. G. Nolte et al., "Robustly Estimating the Flow Direction of Information in Complex Physical Systems" Phys. Rev. Lett. 100, pp. 234101-234104, 2008.
22. http://clopinet.com/causality/data/nolte/
23. P.L. Williams, R.D. Beer, Nonnegative Decomposition of Multivariate Information, preprint arXiv:1004.2515 (2010).
24. P.L. Williams, R.D. Beer, Generalized Measures of Information Transfer, preprint arXiv:1102.1507 (2011).