-
1
-
-
0022629490
-
Characterization of Herbaspirillum seropedicae gen. nov., sp. nov., a root-associated nitrogen-fixing bacterium
-
Baldani JI, Baldani VLD, Seldin L, Döbereiner J. 1986. Characterization of Herbaspirillum seropedicae gen. nov., sp. nov., a root-associated nitrogen-fixing bacterium. Int. J. Syst. Bacteriol. 36:86-93.
-
(1986)
Int. J. Syst. Bacteriol.
, vol.36
, pp. 86-93
-
-
Baldani, J.I.1
Baldani, V.L.D.2
Seldin, L.3
Döbereiner, J.4
-
2
-
-
79951530130
-
Scaffolding pre-assembled contigs using SSPACE
-
Boetzer M, Henkel CV, Jansen HJ, Butler D, Pirovano W. 2011.Scaffolding pre-assembled contigs using SSPACE. Bioinformatics 27:578-579.
-
(2011)
Bioinformatics
, vol.27
, pp. 578-579
-
-
Boetzer, M.1
Henkel, C.V.2
Jansen, H.J.3
Butler, D.4
Pirovano, W.5
-
3
-
-
84862591603
-
Toward almost closed genomes with GapFiller
-
doi:10.1186/gb-2012-13-6-r56
-
Boetzer M, Pirovano W. 2012. Toward almost closed genomes with GapFiller. Genome Biol. 13:R56. doi:10.1186/gb-2012-13-6-r56.
-
(2012)
Genome Biol
, vol.13
-
-
Boetzer, M.1
Pirovano, W.2
-
4
-
-
0036221981
-
Herbaspirillum colonization increases growth and nitrogen accumulation in aluminiumtolerant rice varieties
-
Gyaneshwar P, James EK, Reddy PM, Ladha JK. 2002. Herbaspirillum colonization increases growth and nitrogen accumulation in aluminiumtolerant rice varieties. New Phytol. 154:131-145.
-
(2002)
New Phytol
, vol.154
, pp. 131-145
-
-
Gyaneshwar, P.1
James, E.K.2
Reddy, P.M.3
Ladha, J.K.4
-
5
-
-
77952299957
-
Prodigal: prokaryotic gene recognition and translation initiation site identification
-
doi:10.1186/1471-2105-11-119
-
Hyatt D, et al. 2010. Prodigal: prokaryotic gene recognition and translation initiation site identification. BMC Bioinform. 11:119. doi:10.1186/1471-2105-11-119.
-
(2010)
BMC Bioinform
, vol.11
, pp. 119
-
-
Hyatt, D.1
-
6
-
-
0030956751
-
Herbaspirillum, an endophytic diazotroph colonizing vascular tissue in leaves of Sorghum bicolor L. Moench
-
James E, Olivares F, Baldani J, Döbereiner J. 1997. Herbaspirillum, an endophytic diazotroph colonizing vascular tissue in leaves of Sorghum bicolor L. Moench. J. Exp. Bot. 48:785-798.
-
(1997)
J. Exp. Bot.
, vol.48
, pp. 785-798
-
-
James, E.1
Olivares, F.2
Baldani, J.3
Döbereiner, J.4
-
7
-
-
0036748509
-
Infection and colonization of rice seedlings by the plant growth-promoting bacterium Herbaspirillum seropedicae Z67
-
James EK, et al. 2002. Infection and colonization of rice seedlings by the plant growth-promoting bacterium Herbaspirillum seropedicae Z67. Mol. Plant Microbe Interact. 15:894-906.
-
(2002)
Mol. Plant Microbe Interact.
, vol.15
, pp. 894-906
-
-
James, E.K.1
-
8
-
-
34250665888
-
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
-
Lagesen K, Hallin P, Rodland EA, Staerfeldt HH, Rognes T, Ussery DW. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 3100-3108
-
-
Lagesen, K.1
Hallin, P.2
Rodland, E.A.3
Staerfeldt, H.H.4
Rognes, T.5
Ussery, D.W.6
-
9
-
-
79960112061
-
A colorimetric assay of 1-aminocyclopropane-1-carboxylate (ACC) based on ninhydrin reaction for rapid screening of bacteria containing ACC deaminase
-
Li Z, Chang S, Lin L, Li Y, An Q. 2011. A colorimetric assay of 1-aminocyclopropane-1-carboxylate (ACC) based on ninhydrin reaction for rapid screening of bacteria containing ACC deaminase. Lett. Appl. Microbiol.53:178-185.
-
(2011)
Lett. Appl. Microbiol.
, vol.53
, pp. 178-185
-
-
Li, Z.1
Chang, S.2
Lin, L.3
Li, Y.4
An, Q.5
-
10
-
-
0030854739
-
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
-
Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955-964.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
11
-
-
0037561991
-
GenDB-an open source genome annotation system for prokaryote genomes
-
Meyer F, et al. 2003. GenDB-an open source genome annotation system for prokaryote genomes. Nucleic Acids Res. 31:2187-2195.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 2187-2195
-
-
Meyer, F.1
-
12
-
-
84862667110
-
Herbaspirillum-plant interactions: microscopical, histological and molecular aspects
-
Monteiro RA, et al. 2012. Herbaspirillum-plant interactions: microscopical, histological and molecular aspects. Plant Soil 356:175-196.
-
(2012)
Plant Soil
, vol.356
, pp. 175-196
-
-
Monteiro, R.A.1
-
13
-
-
85047679434
-
Occurrence of the endophytic diazotrophs Herbaspirillum spp. in roots, stems, and leaves, predominantly of Gramineae
-
Olivares FL, Baldani VLD, Reis VM, Baldani JI, Döbereiner J. 1996.Occurrence of the endophytic diazotrophs Herbaspirillum spp. in roots, stems, and leaves, predominantly of Gramineae. Biol. Fertil. Soils 21:197-200.
-
(1996)
Biol. Fertil. Soils
, vol.21
, pp. 197-200
-
-
Olivares, F.L.1
Baldani, V.L.D.2
Reis, V.M.3
Baldani, J.I.4
Döbereiner, J.5
-
14
-
-
79957974830
-
Genome of Herbaspirillum seropedicae strain SmR1, a specialized diazotrophic endophyte of tropical grasses
-
doi:10.1371/journal.pgen.1002064
-
Pedrosa FO, et al. 2011. Genome of Herbaspirillum seropedicae strain SmR1, a specialized diazotrophic endophyte of tropical grasses. PLoS Genet. 7:e1002064. doi:10.1371/journal.pgen.1002064.
-
(2011)
PLoS Genet
, vol.7
-
-
Pedrosa, F.O.1
-
15
-
-
43149115851
-
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
-
Zerbino DR, Birney E. 2008. Velvet: Algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829.
-
(2008)
Genome Res
, vol.18
, pp. 821-829
-
-
Zerbino, D.R.1
Birney, E.2
-
16
-
-
84870711662
-
Genome sequence of the pathogenic Herbaspirillum seropedicae strain Os45, isolated from rice roots
-
Zhu B, et al. 2012. Genome sequence of the pathogenic Herbaspirillum seropedicae strain Os45, isolated from rice roots. J. Bacteriol. 194:6995-6996.
-
(2012)
J. Bacteriol.
, vol.194
, pp. 6995-6996
-
-
Zhu, B.1
|