메뉴 건너뛰기




Volumn 7, Issue 11, 2012, Pages

A Catalytic Role of XoxF1 as La3+-Dependent Methanol Dehydrogenase in Methylobacterium extorquens Strain AM1

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL ENZYME; CALCIUM ION; LANTHANUM; METHANOL; METHANOL DEHYDROGENASE;

EID: 84870284068     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0050480     Document Type: Article
Times cited : (161)

References (38)
  • 1
    • 70349481520 scopus 로고    scopus 로고
    • Community proteogenomics reveals insights into the physiology of phyllosphere bacteria
    • Delmotte N, Knief C, Chaffron S, Innerebner G, Roschitzki B, et al. (2009) Community proteogenomics reveals insights into the physiology of phyllosphere bacteria. Proc Natl Acad Sci U S A 106: 16428-16433.
    • (2009) Proc Natl Acad Sci U S A , vol.106 , pp. 16428-16433
    • Delmotte, N.1    Knief, C.2    Chaffron, S.3    Innerebner, G.4    Roschitzki, B.5
  • 2
    • 80053143813 scopus 로고    scopus 로고
    • Yeast methylotrophy and autophagy in a methanol-oscillating environment on growing Arabidopsis thaliana leaves
    • Kawaguchi K, Yurimoto H, Oku M, Sakai Y, (2011) Yeast methylotrophy and autophagy in a methanol-oscillating environment on growing Arabidopsis thaliana leaves. PLoS ONE 6: e25257.
    • (2011) PLoS ONE , vol.6
    • Kawaguchi, K.1    Yurimoto, H.2    Oku, M.3    Sakai, Y.4
  • 3
    • 84862590329 scopus 로고    scopus 로고
    • Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice
    • doi:10.1038/ismej.2011.192
    • Knief C, Delmotte N, Chaffron S, Stark M, Innerebner G, et al. (2012) Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice. ISME J 6doi:10.1038/ismej.2011.192.
    • (2012) ISME J , vol.6
    • Knief, C.1    Delmotte, N.2    Chaffron, S.3    Stark, M.4    Innerebner, G.5
  • 4
    • 42049108808 scopus 로고    scopus 로고
    • Cultivation independent characterization of Methylobacterium populations in the plant phyllosphere by automated ribosomal intergenic spacer analysis
    • Knief C, Frances L, Cantet F, Vorholt JA, (2008) Cultivation independent characterization of Methylobacterium populations in the plant phyllosphere by automated ribosomal intergenic spacer analysis. Appl Environ Microbiol 74: 2218-2228.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 2218-2228
    • Knief, C.1    Frances, L.2    Cantet, F.3    Vorholt, J.A.4
  • 5
    • 77952672792 scopus 로고    scopus 로고
    • Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere
    • Knief C, Ramette A, Frances L, Alonso-Blanco C, Vorholt JA, (2010) Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere. ISME J 4: 719-728.
    • (2010) ISME J , vol.4 , pp. 719-728
    • Knief, C.1    Ramette, A.2    Frances, L.3    Alonso-Blanco, C.4    Vorholt, J.A.5
  • 6
    • 0013050747 scopus 로고    scopus 로고
    • Methylobacterium spp.: Phylloplane bacteria involved in cross-talk with the plant host
    • In: Lindow SE, Hecht-Poinar EI Elliott VJ, editors, APS Press
    • Holland MA, Long RLG, Polacco JC (2002) Methylobacterium spp.: Phylloplane bacteria involved in cross-talk with the plant host. In: Lindow SE, Hecht-Poinar EI Elliott VJ, editors. Phyllosphere Microbiology. APS Press. pp. 125-135.
    • (2002) Phyllosphere Microbiology , pp. 125-135
    • Holland, M.A.1    Long, R.L.G.2    Polacco, J.C.3
  • 7
    • 33845629015 scopus 로고    scopus 로고
    • Molecular interaction between Methylobacterium extorquens and seedlings: growth promotion, methanol consumption, and localization of the methanol emission site
    • Abanda-Nkpwatt D, Müsch M, Tschiersch J, Boettner M, Schwab W, (2006) Molecular interaction between Methylobacterium extorquens and seedlings: growth promotion, methanol consumption, and localization of the methanol emission site. J Exp Bot 57: 4025-4032.
    • (2006) J Exp Bot , vol.57 , pp. 4025-4032
    • Abanda-Nkpwatt, D.1    Müsch, M.2    Tschiersch, J.3    Boettner, M.4    Schwab, W.5
  • 8
    • 33748352029 scopus 로고    scopus 로고
    • A proteomic study of Methylobacterium extorquens reveals a response regulator essential for epiphytic growth
    • Gourion B, Rossignol M, Vorholt JA, (2006) A proteomic study of Methylobacterium extorquens reveals a response regulator essential for epiphytic growth. Proc Natl Acad Sci U S A 103: 13186-13191.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 13186-13191
    • Gourion, B.1    Rossignol, M.2    Vorholt, J.A.3
  • 9
    • 30644478662 scopus 로고    scopus 로고
    • Methylotrophic metabolism is advantageous for Methylobacterium extorquens during colonization of Medicago truncatula under competitive conditions
    • Sy A, Timmers AC, Knief C, Vorholt JA, (2005) Methylotrophic metabolism is advantageous for Methylobacterium extorquens during colonization of Medicago truncatula under competitive conditions. Appl Environ Microbiol 71: 7245-7252.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 7245-7252
    • Sy, A.1    Timmers, A.C.2    Knief, C.3    Vorholt, J.A.4
  • 10
    • 0037967152 scopus 로고    scopus 로고
    • Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view
    • Chistoserdova L, Chen SW, Lapidus A, Lidstrom ME, (2003) Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view. J Bacteriol 185: 2980-2987.
    • (2003) J Bacteriol , vol.185 , pp. 2980-2987
    • Chistoserdova, L.1    Chen, S.W.2    Lapidus, A.3    Lidstrom, M.E.4
  • 11
    • 58849109320 scopus 로고    scopus 로고
    • Methanol-based industrial biotechnology: current status and future perspectives of methylotrophic bacteria
    • Schrader J, Schilling M, Holtmann D, Sell D, Filho MV, et al. (2009) Methanol-based industrial biotechnology: current status and future perspectives of methylotrophic bacteria. Trends Biotechnol 27: 107-115.
    • (2009) Trends Biotechnol , vol.27 , pp. 107-115
    • Schrader, J.1    Schilling, M.2    Holtmann, D.3    Sell, D.4    Filho, M.V.5
  • 12
    • 65949106800 scopus 로고    scopus 로고
    • Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources
    • Vuilleumier S, Chistoserdova L, Lee MC, Bringel F, Lajus A, et al. (2009) Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources. PLoS One 4: e5584.
    • (2009) PLoS One , vol.4
    • Vuilleumier, S.1    Chistoserdova, L.2    Lee, M.C.3    Bringel, F.4    Lajus, A.5
  • 13
    • 0034576224 scopus 로고    scopus 로고
    • Methanol dehydrogenase, a PQQ-containing quinoprotein dehydrogenase
    • Anthony C, (2000) Methanol dehydrogenase, a PQQ-containing quinoprotein dehydrogenase. Subcell Biochem 35: 73-117.
    • (2000) Subcell Biochem , vol.35 , pp. 73-117
    • Anthony, C.1
  • 14
    • 1242273667 scopus 로고    scopus 로고
    • The structure and mechanism of methanol dehydrogenase
    • Anthony C, Williams P, (2003) The structure and mechanism of methanol dehydrogenase. Biochim Biophys Acta 1647: 18-23.
    • (2003) Biochim Biophys Acta , vol.1647 , pp. 18-23
    • Anthony, C.1    Williams, P.2
  • 16
    • 0013770768 scopus 로고
    • The methanol-oxidizing enzyme of Pseudomonas sp. M 27
    • Anthony C, Zatman LJ, (1964) The methanol-oxidizing enzyme of Pseudomonas sp. M 27. Biochem J 92: 614-621.
    • (1964) Biochem J , vol.92 , pp. 614-621
    • Anthony, C.1    Zatman, L.J.2
  • 17
    • 0028353557 scopus 로고
    • New unified nomenclature for genes involved in the oxidation of methanol in Gram-negative bacteria
    • Lidstrom ME, Anthony C, Biville F, Gasser F, Goodwin P, et al. (1994) New unified nomenclature for genes involved in the oxidation of methanol in Gram-negative bacteria. FEMS Microbiol Lett 117: 103-106.
    • (1994) FEMS Microbiol Lett , vol.117 , pp. 103-106
    • Lidstrom, M.E.1    Anthony, C.2    Biville, F.3    Gasser, F.4    Goodwin, P.5
  • 18
    • 0022569204 scopus 로고
    • Isolation and complementation analysis of 10 methanol oxidation mutant classes and identification of the methanol dehydrogenase structural gene of Methylobacterium sp. strain AM1
    • Nunn DN, Lidstrom ME, (1986) Isolation and complementation analysis of 10 methanol oxidation mutant classes and identification of the methanol dehydrogenase structural gene of Methylobacterium sp. strain AM1. J Bacteriol 166: 581-590.
    • (1986) J Bacteriol , vol.166 , pp. 581-590
    • Nunn, D.N.1    Lidstrom, M.E.2
  • 19
    • 0022576753 scopus 로고
    • Phenotypic characterization of 10 methanol oxidation mutant classes in Methylobacterium sp. strain AM1
    • Nunn DN, Lidstrom ME, (1986) Phenotypic characterization of 10 methanol oxidation mutant classes in Methylobacterium sp. strain AM1. J Bacteriol 166: 591-597.
    • (1986) J Bacteriol , vol.166 , pp. 591-597
    • Nunn, D.N.1    Lidstrom, M.E.2
  • 20
    • 0030969849 scopus 로고    scopus 로고
    • Molecular and mutational analysis of a DNA region separating two methylotrophy gene clusters in Methylobacterium extorquens AM1
    • Chistoserdova L, Lidstrom ME, (1997) Molecular and mutational analysis of a DNA region separating two methylotrophy gene clusters in Methylobacterium extorquens AM1. Microbiology 143: 1729-1736.
    • (1997) Microbiology , vol.143 , pp. 1729-1736
    • Chistoserdova, L.1    Lidstrom, M.E.2
  • 21
    • 77955362394 scopus 로고    scopus 로고
    • Functional investigation of methanol dehydrogenase-like protein XoxF in Methylobacterium extorquens AM1
    • Schmidt S, Christen P, Kiefer P, Vorholt JA, (2010) Functional investigation of methanol dehydrogenase-like protein XoxF in Methylobacterium extorquens AM1. Microbiology 156: 2575-2586.
    • (2010) Microbiology , vol.156 , pp. 2575-2586
    • Schmidt, S.1    Christen, P.2    Kiefer, P.3    Vorholt, J.A.4
  • 22
    • 80055054718 scopus 로고    scopus 로고
    • XoxF is required for expression of methanol dehydrogenase in Methylobacterium extorquens AM1
    • Skovran E, Palmer AD, Rountree AM, Good NM, Lidstrom ME, (2011) XoxF is required for expression of methanol dehydrogenase in Methylobacterium extorquens AM1. J Bacteriol 193: 6032-6038.
    • (2011) J Bacteriol , vol.193 , pp. 6032-6038
    • Skovran, E.1    Palmer, A.D.2    Rountree, A.M.3    Good, N.M.4    Lidstrom, M.E.5
  • 23
    • 79957610700 scopus 로고    scopus 로고
    • Molecular structure and gene analysis of Ce3+-induced methanol dehydrogenase of Bradyrhizobium sp. MAFF211645
    • Fitriyanto NA, Fushimi M, Matsunaga M, Pertiwiningrum A, Iwama T, et al. (2011) Molecular structure and gene analysis of Ce3+-induced methanol dehydrogenase of Bradyrhizobium sp. MAFF211645. J Biosci Bioeng 111: 613-617.
    • (2011) J Biosci Bioeng , vol.111 , pp. 613-617
    • Fitriyanto, N.A.1    Fushimi, M.2    Matsunaga, M.3    Pertiwiningrum, A.4    Iwama, T.5
  • 24
    • 79954748696 scopus 로고    scopus 로고
    • Molecular structure of La3+-induced methanol dehydrogenase-like protein in Methylobacterium radiotolerans
    • Hibi Y, Asai K, Arafuka H, Hamajima M, Iwama T, et al. (2011) Molecular structure of La3+-induced methanol dehydrogenase-like protein in Methylobacterium radiotolerans. J Biosci Bioeng 111: 547-549.
    • (2011) J Biosci Bioeng , vol.111 , pp. 547-549
    • Hibi, Y.1    Asai, K.2    Arafuka, H.3    Hamajima, M.4    Iwama, T.5
  • 25
    • 23844469095 scopus 로고    scopus 로고
    • Rare earth elements in forest-floor herbs as related to soil conditions and mineral nutrition
    • Tyler G, Olsson T, (2005) Rare earth elements in forest-floor herbs as related to soil conditions and mineral nutrition. Biol Trace Elem Res 106: 177-191.
    • (2005) Biol Trace Elem Res , vol.106 , pp. 177-191
    • Tyler, G.1    Olsson, T.2
  • 26
    • 14644440591 scopus 로고    scopus 로고
    • Rare earth elements in soil and plant systems-a review
    • Tyler G, (2004) Rare earth elements in soil and plant systems-a review. Plant Soil 267: 191-206.
    • (2004) Plant Soil , vol.267 , pp. 191-206
    • Tyler, G.1
  • 27
    • 70350322308 scopus 로고
    • Rare earth elements in biological systems
    • In: Gschneidner KA Jr, Eyring L, Editors, North-Holland, Elsevier Science Publishers BV
    • Brawn PH, Rathjen AH, Graham RD, Tribe DE (1990) Rare earth elements in biological systems., In: Gschneidner KA Jr, Eyring L, Editors, Handbook on the physics and chemistry of rare earths, vol. 13. North-Holland, Elsevier Science Publishers BV, pp. 423-452.
    • (1990) Handbook on the physics and chemistry of rare earths , vol.13 , pp. 423-452
    • Brawn, P.H.1    Rathjen, A.H.2    Graham, R.D.3    Tribe, D.E.4
  • 28
    • 67650144829 scopus 로고    scopus 로고
    • Lanthanum ions inhibit the mammalian Sec61 complex in its channel dynamics and protein transport activity
    • Erdmann F, Jung M, Eyrisch S, Lang S, Helms V, et al. (2009) Lanthanum ions inhibit the mammalian Sec61 complex in its channel dynamics and protein transport activity. FEBS Lett 583: 2359-2364.
    • (2009) FEBS Lett , vol.583 , pp. 2359-2364
    • Erdmann, F.1    Jung, M.2    Eyrisch, S.3    Lang, S.4    Helms, V.5
  • 29
    • 0344687287 scopus 로고    scopus 로고
    • Study on biological effect of La3+ on Escherichia coli by atomic force microscopy
    • Liu P, Liu Y, Lu Z, Zhu J, Dong J, et al. (2004) Study on biological effect of La3+ on Escherichia coli by atomic force microscopy. J Inorg Biochem 98: 68-72.
    • (2004) J Inorg Biochem , vol.98 , pp. 68-72
    • Liu, P.1    Liu, Y.2    Lu, Z.3    Zhu, J.4    Dong, J.5
  • 30
    • 77956897108 scopus 로고    scopus 로고
    • Molecular and cellular mechanism of the effect of La(III) on horseradish peroxidase
    • Wang L, Zhou Q, Lu T, Ding X, Huang X, (2010) Molecular and cellular mechanism of the effect of La(III) on horseradish peroxidase. J Biol Inorg Chem 15: 1063-1069.
    • (2010) J Biol Inorg Chem , vol.15 , pp. 1063-1069
    • Wang, L.1    Zhou, Q.2    Lu, T.3    Ding, X.4    Huang, X.5
  • 31
    • 0034858690 scopus 로고    scopus 로고
    • Development of improved versatile broad-host-range vectors for use in methylotrophs and other Gram-negative bacteria
    • Marx CJ, Lidstrom ME, (2001) Development of improved versatile broad-host-range vectors for use in methylotrophs and other Gram-negative bacteria. Microbiology 147: 2065-2075.
    • (2001) Microbiology , vol.147 , pp. 2065-2075
    • Marx, C.J.1    Lidstrom, M.E.2
  • 32
    • 80053345905 scopus 로고    scopus 로고
    • SignalP 4.0: discriminating signal peptides from transmembrane regions
    • Petersen TN, Brunak S, von Heijne G, Nielsen H, (2011) SignalP 4.0: discriminating signal peptides from transmembrane regions. Nat Methods 8: 785-786.
    • (2011) Nat Methods , vol.8 , pp. 785-786
    • Petersen, T.N.1    Brunak, S.2    von Heijne, G.3    Nielsen, H.4
  • 33
    • 0000011010 scopus 로고
    • Methanol assimilation by Hyphomicrobium spp
    • Harder W, Attwood M, Quayle JR, (1973) Methanol assimilation by Hyphomicrobium spp. J Gen Microbiol 78: 155-163.
    • (1973) J Gen Microbiol , vol.78 , pp. 155-163
    • Harder, W.1    Attwood, M.2    Quayle, J.R.3
  • 34
    • 0021027842 scopus 로고
    • A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in gram negative bacteria
    • Simon R, Priefer U, Pühler A, (1983) A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in gram negative bacteria. Nature Biotechnol 1: 784-779.
    • (1983) Nature Biotechnol , vol.1 , pp. 779-784
    • Simon, R.1    Priefer, U.2    Pühler, A.3
  • 35
    • 0036841380 scopus 로고    scopus 로고
    • Broad-host-range cre-lox system for antibiotic marker recycling in gram-negative bacteria
    • Marx CJ, Lidstrom ME, (2002) Broad-host-range cre-lox system for antibiotic marker recycling in gram-negative bacteria. Biotechniques 33: 1062-1067.
    • (2002) Biotechniques , vol.33 , pp. 1062-1067
    • Marx, C.J.1    Lidstrom, M.E.2
  • 36
    • 0025115682 scopus 로고
    • Methanol dehydrogenase from Methylobacterium extorquens AM1
    • Day DJ, Anthony C, (1990) Methanol dehydrogenase from Methylobacterium extorquens AM1. Methods Enzymol 188: 210-216.
    • (1990) Methods Enzymol , vol.188 , pp. 210-216
    • Day, D.J.1    Anthony, C.2
  • 37
    • 0030906637 scopus 로고    scopus 로고
    • Molecular analysis of MxbD and MxbM, a putative sensor-regulator pair required for oxidation of methanol in Methylobacterium extorquens AM1
    • Springer AL, Morris CJ, Lidstrom ME, (1997) Molecular analysis of MxbD and MxbM, a putative sensor-regulator pair required for oxidation of methanol in Methylobacterium extorquens AM1. Microbiology 143: 1737-1744.
    • (1997) Microbiology , vol.143 , pp. 1737-1744
    • Springer, A.L.1    Morris, C.J.2    Lidstrom, M.E.3
  • 38
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford MM, (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254.
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.