-
1
-
-
34247344319
-
Retrotransposable elements and human disease
-
Callinan PA, Batzer MA, (2006) Retrotransposable elements and human disease. Genome Dyn 1: 104-115.
-
(2006)
Genome Dyn
, vol.1
, pp. 104-115
-
-
Callinan, P.A.1
Batzer, M.A.2
-
2
-
-
33846704345
-
Inviting instability: transposable elements, double-strand breaks, and the maintenance of genome integrity
-
Hedges DJ, Deininger PL, (2007) Inviting instability: transposable elements, double-strand breaks, and the maintenance of genome integrity. Mutat Res 616: 46-59.
-
(2007)
Mutat Res
, vol.616
, pp. 46-59
-
-
Hedges, D.J.1
Deininger, P.L.2
-
3
-
-
0018603543
-
Hybrid dysgenesis in DROSOPHILA MELANOGASTER: sterility resulting from gonadal dysgenesis in the P-M system
-
Kidwell MG, Novy JB, (1979) Hybrid dysgenesis in DROSOPHILA MELANOGASTER: sterility resulting from gonadal dysgenesis in the P-M system. Genetics 92: 1127-1140.
-
(1979)
Genetics
, vol.92
, pp. 1127-1140
-
-
Kidwell, M.G.1
Novy, J.B.2
-
4
-
-
2642545153
-
Higher processing rates of Alu-containing sequences in kidney tumors and cell lines with overexpressed Alu-mRNAs
-
n.d
-
Vilà MR, Gelpí C, Nicolás A, Morote J, Schwartz S, et al. (n.d.) Higher processing rates of Alu-containing sequences in kidney tumors and cell lines with overexpressed Alu-mRNAs. Oncol Rep 10: 1903-1909.
-
Oncol Rep
, vol.10
, pp. 1903-1909
-
-
Vilà, M.R.1
Gelpí, C.2
Nicolás, A.3
Morote, J.4
Schwartz, S.5
-
5
-
-
9944233064
-
Distinctive pattern of LINE-1 methylation level in normal tissues and the association with carcinogenesis
-
Chalitchagorn K, Shuangshoti S, Hourpai N, Kongruttanachok N, Tangkijvanich P, et al. (2004) Distinctive pattern of LINE-1 methylation level in normal tissues and the association with carcinogenesis. Oncogene 23: 8841-8846.
-
(2004)
Oncogene
, vol.23
, pp. 8841-8846
-
-
Chalitchagorn, K.1
Shuangshoti, S.2
Hourpai, N.3
Kongruttanachok, N.4
Tangkijvanich, P.5
-
6
-
-
38049164130
-
Activation and transposition of endogenous retroviral elements in hypomethylation induced tumors in mice
-
Howard G, Eiges R, Gaudet F, Jaenisch R, Eden A, (2008) Activation and transposition of endogenous retroviral elements in hypomethylation induced tumors in mice. Oncogene 27: 404-408.
-
(2008)
Oncogene
, vol.27
, pp. 404-408
-
-
Howard, G.1
Eiges, R.2
Gaudet, F.3
Jaenisch, R.4
Eden, A.5
-
7
-
-
33845189717
-
Dramatic amplification of a rice transposable element during recent domestication
-
Naito K, Cho E, Yang G, Campbell MA, Yano K, et al. (2006) Dramatic amplification of a rice transposable element during recent domestication. Proc Natl Acad Sci U S A 103: 17620-17625.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 17620-17625
-
-
Naito, K.1
Cho, E.2
Yang, G.3
Campbell, M.A.4
Yano, K.5
-
8
-
-
84865806641
-
LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders
-
Sun C, Shepard DB, Chong RA, López Arriaza J, Hall K, et al. (2012) LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders. Genome Biol Evol 4: 168-183.
-
(2012)
Genome Biol Evol
, vol.4
, pp. 168-183
-
-
Sun, C.1
Shepard, D.B.2
Chong, R.A.3
López Arriaza, J.4
Hall, K.5
-
9
-
-
15244341492
-
High rate of horizontal transfer of transposable elements in Drosophila
-
Sánchez-Gracia A, Maside X, Charlesworth B, (2005) High rate of horizontal transfer of transposable elements in Drosophila. Trends Genet 21: 200-203.
-
(2005)
Trends Genet
, vol.21
, pp. 200-203
-
-
Sánchez-Gracia, A.1
Maside, X.2
Charlesworth, B.3
-
10
-
-
62349104354
-
Widespread evidence for horizontal transfer of transposable elements across Drosophila genomes
-
Bartolomé C, Bello X, Maside X, (2009) Widespread evidence for horizontal transfer of transposable elements across Drosophila genomes. Genome Biol 10: R22.
-
(2009)
Genome Biol
, vol.10
-
-
Bartolomé, C.1
Bello, X.2
Maside, X.3
-
11
-
-
77951778552
-
A role for host-parasite interactions in the horizontal transfer of transposons across phyla
-
Gilbert C, Schaack S, Pace JK, Brindley PJ, Feschotte C, (2010) A role for host-parasite interactions in the horizontal transfer of transposons across phyla. Nature 464: 1347-1350.
-
(2010)
Nature
, vol.464
, pp. 1347-1350
-
-
Gilbert, C.1
Schaack, S.2
Pace, J.K.3
Brindley, P.J.4
Feschotte, C.5
-
12
-
-
79551681942
-
Comparative analysis of transposable elements in the melanogaster subgroup sequenced genomes
-
Lerat E, Burlet N, Biémont C, Vieira C, (2011) Comparative analysis of transposable elements in the melanogaster subgroup sequenced genomes. Gene 473: 100-109.
-
(2011)
Gene
, vol.473
, pp. 100-109
-
-
Lerat, E.1
Burlet, N.2
Biémont, C.3
Vieira, C.4
-
13
-
-
38849167412
-
Biogenesis and germline functions of piRNAs
-
Klattenhoff C, Theurkauf W, (2008) Biogenesis and germline functions of piRNAs. Development 135: 3-9.
-
(2008)
Development
, vol.135
, pp. 3-9
-
-
Klattenhoff, C.1
Theurkauf, W.2
-
14
-
-
78149481868
-
The piRNA pathway: a fly's perspective on the guardian of the genome
-
Senti K-A, Brennecke J, (2010) The piRNA pathway: a fly's perspective on the guardian of the genome. Trends Genet 26: 499-509.
-
(2010)
Trends Genet
, vol.26
, pp. 499-509
-
-
Senti, K.-A.1
Brennecke, J.2
-
15
-
-
78049387387
-
Maternal mRNA deadenylation and decay by the piRNA pathway in the early Drosophila embryo
-
Rouget C, Papin C, Boureux A, Meunier A-C, Franco B, et al. (2010) Maternal mRNA deadenylation and decay by the piRNA pathway in the early Drosophila embryo. Nature 467: 1128-1132.
-
(2010)
Nature
, vol.467
, pp. 1128-1132
-
-
Rouget, C.1
Papin, C.2
Boureux, A.3
Meunier, A.-C.4
Franco, B.5
-
16
-
-
84864643089
-
Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis
-
Vourekas A, Zheng Q, Alexiou P, Maragkakis M, Kirino Y, et al. (2012) Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis. Nat Struct Mol Biol 19: 773-781.
-
(2012)
Nat Struct Mol Biol
, vol.19
, pp. 773-781
-
-
Vourekas, A.1
Zheng, Q.2
Alexiou, P.3
Maragkakis, M.4
Kirino, Y.5
-
17
-
-
33947273235
-
Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
-
Brennecke J, Aravin AA, Stark A, Dus M, Kellis M, et al. (2007) Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell 128: 1089-1103.
-
(2007)
Cell
, vol.128
, pp. 1089-1103
-
-
Brennecke, J.1
Aravin, A.A.2
Stark, A.3
Dus, M.4
Kellis, M.5
-
18
-
-
65549105694
-
Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary
-
Malone CD, Brennecke J, Dus M, Stark A, McCombie WR, et al. (2009) Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary. Cell 137: 522-535.
-
(2009)
Cell
, vol.137
, pp. 522-535
-
-
Malone, C.D.1
Brennecke, J.2
Dus, M.3
Stark, A.4
McCombie, W.R.5
-
19
-
-
75649145014
-
Population dynamics of PIWI-interacting RNAs (piRNAs) and their targets in Drosophila
-
Lu J, Clark AG, (2010) Population dynamics of PIWI-interacting RNAs (piRNAs) and their targets in Drosophila. Genome Res 20: 212-227.
-
(2010)
Genome Res
, vol.20
, pp. 212-227
-
-
Lu, J.1
Clark, A.G.2
-
20
-
-
84455206395
-
Adaptation to P element transposon invasion in Drosophila melanogaster
-
Khurana JS, Wang J, Xu J, Koppetsch BS, Thomson TC, et al. (2011) Adaptation to P element transposon invasion in Drosophila melanogaster. Cell 147: 1551-1563.
-
(2011)
Cell
, vol.147
, pp. 1551-1563
-
-
Khurana, J.S.1
Wang, J.2
Xu, J.3
Koppetsch, B.S.4
Thomson, T.C.5
-
21
-
-
78149472020
-
Probing the initiation and effector phases of the somatic piRNA pathway in Drosophila
-
Haase AD, Fenoglio S, Muerdter F, Guzzardo PM, Czech B, et al. (2010) Probing the initiation and effector phases of the somatic piRNA pathway in Drosophila. Genes Dev 24: 2499-2504.
-
(2010)
Genes Dev
, vol.24
, pp. 2499-2504
-
-
Haase, A.D.1
Fenoglio, S.2
Muerdter, F.3
Guzzardo, P.M.4
Czech, B.5
-
22
-
-
27644490641
-
Evidence for maternally transmitted small interfering RNA in the repression of transposition in Drosophila virilis
-
Blumenstiel JP, Hartl DL, (2005) Evidence for maternally transmitted small interfering RNA in the repression of transposition in Drosophila virilis. Proc Natl Acad Sci U S A 102: 15965-15970.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 15965-15970
-
-
Blumenstiel, J.P.1
Hartl, D.L.2
-
23
-
-
57149104113
-
An epigenetic role for maternally inherited piRNAs in transposon silencing
-
Brennecke J, Malone CD, Aravin AA, Sachidanandam R, Stark A, et al. (2008) An epigenetic role for maternally inherited piRNAs in transposon silencing. Science 322: 1387-1392.
-
(2008)
Science
, vol.322
, pp. 1387-1392
-
-
Brennecke, J.1
Malone, C.D.2
Aravin, A.A.3
Sachidanandam, R.4
Stark, A.5
-
24
-
-
54449086787
-
piRNA-mediated nuclear accumulation of retrotransposon transcripts in the Drosophila female germline
-
Chambeyron S, Popkova A, Payen-Groschêne G, Brun C, Laouini D, et al. (2008) piRNA-mediated nuclear accumulation of retrotransposon transcripts in the Drosophila female germline. Proc Natl Acad Sci U S A 105: 14964-14969.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 14964-14969
-
-
Chambeyron, S.1
Popkova, A.2
Payen-Groschêne, G.3
Brun, C.4
Laouini, D.5
-
25
-
-
77955101011
-
Small RNA-based silencing strategies for transposons in the process of invading Drosophila species
-
Rozhkov NV, Aravin AA, Zelentsova ES, Schostak NG, Sachidanandam R, et al. (2010) Small RNA-based silencing strategies for transposons in the process of invading Drosophila species. RNA 16: 1634-1645.
-
(2010)
RNA
, vol.16
, pp. 1634-1645
-
-
Rozhkov, N.V.1
Aravin, A.A.2
Zelentsova, E.S.3
Schostak, N.G.4
Sachidanandam, R.5
-
26
-
-
0020317050
-
The molecular basis of P-M hybrid dysgenesis: the role of the P element, a P-strain-specific transposon family
-
Bingham PM, Kidwell MG, Rubin GM, (1982) The molecular basis of P-M hybrid dysgenesis: the role of the P element, a P-strain-specific transposon family. Cell 29: 995-1004.
-
(1982)
Cell
, vol.29
, pp. 995-1004
-
-
Bingham, P.M.1
Kidwell, M.G.2
Rubin, G.M.3
-
27
-
-
0021717849
-
The molecular basis of I-R hybrid dysgenesis in Drosophila melanogaster: identification, cloning, and properties of the I factor
-
Bucheton A, Paro R, Sang HM, Pelisson A, Finnegan DJ, (1984) The molecular basis of I-R hybrid dysgenesis in Drosophila melanogaster: identification, cloning, and properties of the I factor. Cell 38: 153-163.
-
(1984)
Cell
, vol.38
, pp. 153-163
-
-
Bucheton, A.1
Paro, R.2
Sang, H.M.3
Pelisson, A.4
Finnegan, D.J.5
-
28
-
-
0031021619
-
Penelope, a new family of transposable elements and its possible role in hybrid dysgenesis in Drosophila virilis
-
Evgen'ev MB, Zelentsova H, Shostak N, Kozitsina M, Barskyi V, et al. (1997) Penelope, a new family of transposable elements and its possible role in hybrid dysgenesis in Drosophila virilis. Proc Natl Acad Sci U S A 94: 196-201.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 196-201
-
-
Evgen'ev, M.B.1
Zelentsova, H.2
Shostak, N.3
Kozitsina, M.4
Barskyi, V.5
-
29
-
-
34848858935
-
Telomeric trans-silencing: an epigenetic repression combining RNA silencing and heterochromatin formation
-
doi:10.1371/journal.pgen.0030158
-
Josse T, Teysset L, Todeschini A-L, Sidor CM, Anxolabéhère D, et al. (2007) Telomeric trans-silencing: an epigenetic repression combining RNA silencing and heterochromatin formation. PLoS Genet 3: 1633-1643 doi:10.1371/journal.pgen.0030158.
-
(2007)
PLoS Genet
, vol.3
, pp. 1633-1643
-
-
Josse, T.1
Teysset, L.2
Todeschini, A.-L.3
Sidor, C.M.4
Anxolabéhère, D.5
-
30
-
-
35948940895
-
Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans
-
doi:10.1371/journal.pbio.0050310
-
Begun DJ, Holloway AK, Stevens K, Hillier LW, Poh Y-P, et al. (2007) Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans. PLoS Biol 5: e310 doi:10.1371/journal.pbio.0050310.
-
(2007)
PLoS Biol
, vol.5
-
-
Begun, D.J.1
Holloway, A.K.2
Stevens, K.3
Hillier, L.W.4
Poh, Y.-P.5
-
31
-
-
39749084483
-
Evolution of protein-coding genes in Drosophila
-
Larracuente AM, Sackton TB, Greenberg AJ, Wong A, Singh ND, et al. (2008) Evolution of protein-coding genes in Drosophila. Trends Genet 24: 114-123.
-
(2008)
Trends Genet
, vol.24
, pp. 114-123
-
-
Larracuente, A.M.1
Sackton, T.B.2
Greenberg, A.J.3
Wong, A.4
Singh, N.D.5
-
32
-
-
58249090017
-
The evolution of RNAi as a defence against viruses and transposable elements
-
Obbard DJ, Gordon KHJ, Buck AH, Jiggins FM, (2009) The evolution of RNAi as a defence against viruses and transposable elements. Philos Trans R Soc Lond B Biol Sci 364: 99-115.
-
(2009)
Philos Trans R Soc Lond B Biol Sci
, vol.364
, pp. 99-115
-
-
Obbard, D.J.1
Gordon, K.H.J.2
Buck, A.H.3
Jiggins, F.M.4
-
33
-
-
84863012360
-
The Drosophila melanogaster Genetic Reference Panel
-
Mackay TFC, Richards S, Stone EA, Barbadilla A, Ayroles JF, et al. (2012) The Drosophila melanogaster Genetic Reference Panel. Nature 482: 173-178.
-
(2012)
Nature
, vol.482
, pp. 173-178
-
-
Mackay, T.F.C.1
Richards, S.2
Stone, E.A.3
Barbadilla, A.4
Ayroles, J.F.5
-
34
-
-
1242352089
-
Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocks
-
Tamura K, Subramanian S, Kumar S, (2004) Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocks. Mol Biol Evol 21: 36-44.
-
(2004)
Mol Biol Evol
, vol.21
, pp. 36-44
-
-
Tamura, K.1
Subramanian, S.2
Kumar, S.3
-
35
-
-
0026129061
-
Molecular transfer of a species-specific behavior from Drosophila simulans to Drosophila melanogaster
-
Wheeler DA, Kyriacou CP, Greenacre ML, Yu Q, Rutila JE, et al. (1991) Molecular transfer of a species-specific behavior from Drosophila simulans to Drosophila melanogaster. Science 251: 1082-1085.
-
(1991)
Science
, vol.251
, pp. 1082-1085
-
-
Wheeler, D.A.1
Kyriacou, C.P.2
Greenacre, M.L.3
Yu, Q.4
Rutila, J.E.5
-
36
-
-
0037564969
-
Adaptive evolution drives divergence of a hybrid inviability gene between two species of Drosophila
-
Presgraves DC, Balagopalan L, Abmayr SM, Orr HA, (2003) Adaptive evolution drives divergence of a hybrid inviability gene between two species of Drosophila. Nature 423: 715-719.
-
(2003)
Nature
, vol.423
, pp. 715-719
-
-
Presgraves, D.C.1
Balagopalan, L.2
Abmayr, S.M.3
Orr, H.A.4
-
37
-
-
16644398399
-
Functional divergence caused by ancient positive selection of a Drosophila hybrid incompatibility locus
-
doi:10.1371/journal.pbio.0020142
-
Barbash DA, Awadalla P, Tarone AM, (2004) Functional divergence caused by ancient positive selection of a Drosophila hybrid incompatibility locus. PLoS Biol 2: e142 doi: 10.1371/journal.pbio.0020142.
-
(2004)
PLoS Biol
, vol.2
-
-
Barbash, D.A.1
Awadalla, P.2
Tarone, A.M.3
-
38
-
-
0037274643
-
A novel system of fertility rescue in Drosophila hybrids reveals a link between hybrid lethality and female sterility
-
Barbash DA, Ashburner M, (2003) A novel system of fertility rescue in Drosophila hybrids reveals a link between hybrid lethality and female sterility. Genetics 163: 217-226.
-
(2003)
Genetics
, vol.163
, pp. 217-226
-
-
Barbash, D.A.1
Ashburner, M.2
-
39
-
-
84860389782
-
A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors
-
Handler D, Olivieri D, Novatchkova M, Gruber FS, Meixner K, et al. (2011) A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors. EMBO J 30: 3977-3993.
-
(2011)
EMBO J
, vol.30
, pp. 3977-3993
-
-
Handler, D.1
Olivieri, D.2
Novatchkova, M.3
Gruber, F.S.4
Meixner, K.5
-
40
-
-
39049191279
-
The RNA interference proteins and vasa locus are involved in the silencing of retrotransposons in the female germline of Drosophila melanogaster
-
Vagin VV, Klenov MS, Kalmykova AI, Stolyarenko AD, Kotelnikov RN, et al. (2004) The RNA interference proteins and vasa locus are involved in the silencing of retrotransposons in the female germline of Drosophila melanogaster. RNA Biol 1: 54-58.
-
(2004)
RNA Biol
, vol.1
, pp. 54-58
-
-
Vagin, V.V.1
Klenov, M.S.2
Kalmykova, A.I.3
Stolyarenko, A.D.4
Kotelnikov, R.N.5
-
41
-
-
34548784928
-
Repeat-associated siRNAs cause chromatin silencing of retrotransposons in the Drosophila melanogaster germline
-
Klenov MS, Lavrov SA, Stolyarenko AD, Ryazansky SS, Aravin AA, et al. (2007) Repeat-associated siRNAs cause chromatin silencing of retrotransposons in the Drosophila melanogaster germline. Nucleic Acids Res 35: 5430-5438.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 5430-5438
-
-
Klenov, M.S.1
Lavrov, S.A.2
Stolyarenko, A.D.3
Ryazansky, S.S.4
Aravin, A.A.5
-
42
-
-
34249309547
-
zucchini and squash encode two putative nucleases required for rasiRNA production in the Drosophila germline
-
Pane A, Wehr K, Schüpbach T, (2007) zucchini and squash encode two putative nucleases required for rasiRNA production in the Drosophila germline. Dev Cell 12: 851-862.
-
(2007)
Dev Cell
, vol.12
, pp. 851-862
-
-
Pane, A.1
Wehr, K.2
Schüpbach, T.3
-
43
-
-
34249849029
-
Unique germ-line organelle, nuage, functions to repress selfish genetic elements in Drosophila melanogaster
-
Lim AK, Kai T, (2007) Unique germ-line organelle, nuage, functions to repress selfish genetic elements in Drosophila melanogaster. Proc Natl Acad Sci U S A 104: 6714-6719.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 6714-6719
-
-
Lim, A.K.1
Kai, T.2
-
44
-
-
69249225196
-
The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters
-
Klattenhoff C, Xi H, Li C, Lee S, Xu J, et al. (2009) The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters. Cell 138: 1137-1149.
-
(2009)
Cell
, vol.138
, pp. 1137-1149
-
-
Klattenhoff, C.1
Xi, H.2
Li, C.3
Lee, S.4
Xu, J.5
-
45
-
-
65549118489
-
Collapse of germline piRNAs in the absence of Argonaute3 reveals somatic piRNAs in flies
-
Li C, Vagin VV, Lee S, Xu J, Ma S, et al. (2009) Collapse of germline piRNAs in the absence of Argonaute3 reveals somatic piRNAs in flies. Cell 137: 509-521.
-
(2009)
Cell
, vol.137
, pp. 509-521
-
-
Li, C.1
Vagin, V.V.2
Lee, S.3
Xu, J.4
Ma, S.5
-
46
-
-
79952792594
-
The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells
-
Qi H, Watanabe T, Ku H-Y, Liu N, Zhong M, et al. (2011) The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells. J Biol Chem 286: 3789-3797.
-
(2011)
J Biol Chem
, vol.286
, pp. 3789-3797
-
-
Qi, H.1
Watanabe, T.2
Ku, H.-Y.3
Liu, N.4
Zhong, M.5
-
47
-
-
80051948751
-
Vreteno, a gonad-specific protein, is essential for germline development and primary piRNA biogenesis in Drosophila
-
Zamparini AL, Davis MY, Malone CD, Vieira E, Zavadil J, et al. (2011) Vreteno, a gonad-specific protein, is essential for germline development and primary piRNA biogenesis in Drosophila. Development 138: 4039-4050.
-
(2011)
Development
, vol.138
, pp. 4039-4050
-
-
Zamparini, A.L.1
Davis, M.Y.2
Malone, C.D.3
Vieira, E.4
Zavadil, J.5
-
48
-
-
84864042164
-
shutdown is a component of the Drosophila piRNA biogenesis machinery
-
Preall JB, Czech B, Guzzardo PM, Muerdter F, Hannon GJ, (2012) shutdown is a component of the Drosophila piRNA biogenesis machinery. RNA 18: 1446-1457.
-
(2012)
RNA
, vol.18
, pp. 1446-1457
-
-
Preall, J.B.1
Czech, B.2
Guzzardo, P.M.3
Muerdter, F.4
Hannon, G.J.5
-
49
-
-
47149117454
-
Evolution of genes and genomes on the Drosophila phylogeny
-
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, et al. (2007) Evolution of genes and genomes on the Drosophila phylogeny. Nature 450: 203-218.
-
(2007)
Nature
, vol.450
, pp. 203-218
-
-
Clark, A.G.1
Eisen, M.B.2
Smith, D.R.3
Bergman, C.M.4
Oliver, B.5
-
50
-
-
0018564810
-
Hybrid dysgenesis in DROSOPHILA MELANOGASTER: morphological and cytological studies of ovarian dysgenesis
-
Schaefer RE, Kidwell MG, Fausto-Sterling A, (1979) Hybrid dysgenesis in DROSOPHILA MELANOGASTER: morphological and cytological studies of ovarian dysgenesis. Genetics 92: 1141-1152.
-
(1979)
Genetics
, vol.92
, pp. 1141-1152
-
-
Schaefer, R.E.1
Kidwell, M.G.2
Fausto-Sterling, A.3
-
51
-
-
78049317736
-
Genomic instability of I elements of Drosophila melanogaster in absence of dysgenic crosses
-
doi:10.1371/journal.pone.0013142
-
Moschetti R, Dimitri P, Caizzi R, Junakovic N, (2010) Genomic instability of I elements of Drosophila melanogaster in absence of dysgenic crosses. PloS One 5 (10): e13142 doi:10.1371/journal.pone.0013142.
-
(2010)
PloS One
, vol.5
, Issue.10
-
-
Moschetti, R.1
Dimitri, P.2
Caizzi, R.3
Junakovic, N.4
-
52
-
-
54949129791
-
High rate of recent transposable element-induced adaptation in Drosophila melanogaster
-
doi:10.1371/journal.pbio.0060251
-
González J, Lenkov K, Lipatov M, Macpherson JM, Petrov DA, (2008) High rate of recent transposable element-induced adaptation in Drosophila melanogaster. PLoS Biol 6: e251 doi:10.1371/journal.pbio.0060251.
-
(2008)
PLoS Biol
, vol.6
-
-
González, J.1
Lenkov, K.2
Lipatov, M.3
Macpherson, J.M.4
Petrov, D.A.5
-
53
-
-
79953729211
-
Population genomics of transposable elements in Drosophila melanogaster
-
Petrov DA, Fiston-Lavier A-S, Lipatov M, Lenkov K, González J, (2011) Population genomics of transposable elements in Drosophila melanogaster. Mol Biol Evol 28: 1633-1644.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 1633-1644
-
-
Petrov, D.A.1
Fiston-Lavier, A.-S.2
Lipatov, M.3
Lenkov, K.4
González, J.5
-
54
-
-
33947390781
-
A slicer-mediated mechanism for repeat-associated siRNA 5′ end formation in Drosophila
-
Gunawardane LS, Saito K, Nishida KM, Miyoshi K, Kawamura Y, et al. (2007) A slicer-mediated mechanism for repeat-associated siRNA 5′ end formation in Drosophila. Science 315: 1587-1590.
-
(2007)
Science
, vol.315
, pp. 1587-1590
-
-
Gunawardane, L.S.1
Saito, K.2
Nishida, K.M.3
Miyoshi, K.4
Kawamura, Y.5
-
55
-
-
0028222187
-
Localization of vasa protein to the Drosophila pole plasm is independent of its RNA-binding and helicase activities
-
Liang L, Diehl-Jones W, Lasko P, (1994) Localization of vasa protein to the Drosophila pole plasm is independent of its RNA-binding and helicase activities. Development 120: 1201-1211.
-
(1994)
Development
, vol.120
, pp. 1201-1211
-
-
Liang, L.1
Diehl-Jones, W.2
Lasko, P.3
-
56
-
-
0037352528
-
Maelstrom, a Drosophila spindle-class gene, encodes a protein that colocalizes with Vasa and RDE1/AGO1 homolog, Aubergine, in nuage
-
Findley SD, Tamanaha M, Clegg NJ, Ruohola-Baker H, (2003) Maelstrom, a Drosophila spindle-class gene, encodes a protein that colocalizes with Vasa and RDE1/AGO1 homolog, Aubergine, in nuage. Development 130: 859-871.
-
(2003)
Development
, vol.130
, pp. 859-871
-
-
Findley, S.D.1
Tamanaha, M.2
Clegg, N.J.3
Ruohola-Baker, H.4
-
57
-
-
77951288138
-
Repression of retroelements in Drosophila germline via piRNA pathway by the Tudor domain protein Tejas
-
Patil VS, Kai T, (2010) Repression of retroelements in Drosophila germline via piRNA pathway by the Tudor domain protein Tejas. Current Biol 20: 724-730.
-
(2010)
Current Biol
, vol.20
, pp. 724-730
-
-
Patil, V.S.1
Kai, T.2
-
58
-
-
84866864333
-
The cochaperone shutdown defines a group of biogenesis factors essential for all piRNA populations in Drosophila
-
Olivieri D, Senti K-A, Subramanian S, Sachidanandam R, Brennecke J, (2012) The cochaperone shutdown defines a group of biogenesis factors essential for all piRNA populations in Drosophila. Mol Cell.
-
(2012)
Mol Cell
-
-
Olivieri, D.1
Senti, K.-A.2
Subramanian, S.3
Sachidanandam, R.4
Brennecke, J.5
-
59
-
-
77249093924
-
The molecular evolutionary basis of species formation
-
Presgraves DC, (2010) The molecular evolutionary basis of species formation. Nat Rev Genet 11: 175-180.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 175-180
-
-
Presgraves, D.C.1
-
60
-
-
80755169477
-
The genetics of hybrid incompatibilities
-
Maheshwari S, Barbash DA, (2011) The genetics of hybrid incompatibilities. Annu Rev Genet 45: 331-355.
-
(2011)
Annu Rev Genet
, vol.45
, pp. 331-355
-
-
Maheshwari, S.1
Barbash, D.A.2
-
61
-
-
0022790714
-
Meiotic segregation and male recombination in interspecific hybrids of Drosophila
-
Coyne JA, (1986) Meiotic segregation and male recombination in interspecific hybrids of Drosophila. Genetics 114: 485-494.
-
(1986)
Genetics
, vol.114
, pp. 485-494
-
-
Coyne, J.A.1
-
62
-
-
84966164413
-
Mutation rates in hybrids between sibling species of Drosophila
-
Coyne JA, (1989) Mutation rates in hybrids between sibling species of Drosophila. Heredity 63: 155-162.
-
(1989)
Heredity
, vol.63
, pp. 155-162
-
-
Coyne, J.A.1
-
63
-
-
0016844654
-
A partially inheritable aging influence on a non-Mendelian female sterility in Drosophila melanogaster
-
Bucheton A, Picard G, (1975) [A partially inheritable aging influence on a non-Mendelian female sterility in Drosophila melanogaster]. C R Acad Sci Hebd Seances Acad Sci D 281: 1035-1038.
-
(1975)
C R Acad Sci Hebd Seances Acad Sci D
, vol.281
, pp. 1035-1038
-
-
Bucheton, A.1
Picard, G.2
-
64
-
-
0018639856
-
Non-Mendelian female sterility in Drosophila melanogaster: influence of aging and thermic treatments. III. Cumulative effects induced by these factors
-
Bucheton A, (1979) Non-Mendelian female sterility in Drosophila melanogaster: influence of aging and thermic treatments. III. Cumulative effects induced by these factors. Genetics 93: 131-142.
-
(1979)
Genetics
, vol.93
, pp. 131-142
-
-
Bucheton, A.1
-
65
-
-
33751577950
-
Two Dobzhansky-Muller genes interact to cause hybrid lethality in Drosophila
-
Brideau NJ, Flores HA, Wang J, Maheshwari S, Wang X, et al. (2006) Two Dobzhansky-Muller genes interact to cause hybrid lethality in Drosophila. Science 314: 1292-1295.
-
(2006)
Science
, vol.314
, pp. 1292-1295
-
-
Brideau, N.J.1
Flores, H.A.2
Wang, J.3
Maheshwari, S.4
Wang, X.5
-
66
-
-
70450223175
-
Altered heterochromatin binding by a hybrid sterility protein in Drosophila sibling species
-
Bayes JJ, Malik HS, (2009) Altered heterochromatin binding by a hybrid sterility protein in Drosophila sibling species. Science 326: 1538-1541.
-
(2009)
Science
, vol.326
, pp. 1538-1541
-
-
Bayes, J.J.1
Malik, H.S.2
-
67
-
-
70350510329
-
Species-specific heterochromatin prevents mitotic chromosome segregation to cause hybrid lethality in Drosophila
-
doi:10.1371/journal.pbio.1000234
-
Ferree PM, Barbash DA, (2009) Species-specific heterochromatin prevents mitotic chromosome segregation to cause hybrid lethality in Drosophila. PLoS Biol 7: e1000234 doi:10.1371/journal.pbio.1000234.
-
(2009)
PLoS Biol
, vol.7
-
-
Ferree, P.M.1
Barbash, D.A.2
-
68
-
-
0009673698
-
Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybrid
-
O'Neill RJ, O'Neill MJ, Graves JA, (1998) Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybrid. Nature 393: 68-72.
-
(1998)
Nature
, vol.393
, pp. 68-72
-
-
O'Neill, R.J.1
O'Neill, M.J.2
Graves, J.A.3
-
69
-
-
33745668459
-
Parent-dependent loss of gene silencing during interspecies hybridization
-
Josefsson C, Dilkes B, Comai L, (2006) Parent-dependent loss of gene silencing during interspecies hybridization. Current Biol 16: 1322-1328.
-
(2006)
Current Biol
, vol.16
, pp. 1322-1328
-
-
Josefsson, C.1
Dilkes, B.2
Comai, L.3
-
70
-
-
79958231735
-
Wheat hybridization and polyploidization results in deregulation of small RNAs
-
Kenan-Eichler M, Leshkowitz D, Tal L, Noor E, Melamed-Bessudo C, et al. (2011) Wheat hybridization and polyploidization results in deregulation of small RNAs. Genetics 188: 263-272.
-
(2011)
Genetics
, vol.188
, pp. 263-272
-
-
Kenan-Eichler, M.1
Leshkowitz, D.2
Tal, L.3
Noor, E.4
Melamed-Bessudo, C.5
-
71
-
-
0034828182
-
Drosophila euchromatic LTR retrotransposons are much younger than the host species in which they reside
-
Bowen NJ, McDonald JF, (2001) Drosophila euchromatic LTR retrotransposons are much younger than the host species in which they reside. Genome Res 11: 1527-1540.
-
(2001)
Genome Res
, vol.11
, pp. 1527-1540
-
-
Bowen, N.J.1
McDonald, J.F.2
-
72
-
-
34547471449
-
Recent LTR retrotransposon insertion contrasts with waves of non-LTR insertion since speciation in Drosophila melanogaster
-
Bergman CM, Bensasson D, (2007) Recent LTR retrotransposon insertion contrasts with waves of non-LTR insertion since speciation in Drosophila melanogaster. Proc Natl Acad Sci U S A 104: 11340-11345.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 11340-11345
-
-
Bergman, C.M.1
Bensasson, D.2
-
73
-
-
78751648738
-
Genetic variation of copia suppression in Drosophila melanogaster
-
Vu W, Nuzhdin S, (2011) Genetic variation of copia suppression in Drosophila melanogaster. Heredity 106: 207-217.
-
(2011)
Heredity
, vol.106
, pp. 207-217
-
-
Vu, W.1
Nuzhdin, S.2
-
74
-
-
33845391778
-
Cucumber mosaic virus-encoded 2b suppressor inhibits Arabidopsis Argonaute1 cleavage activity to counter plant defense
-
Zhang X, Yuan Y-R, Pei Y, Lin S-S, Tuschl T, et al. (2006) Cucumber mosaic virus-encoded 2b suppressor inhibits Arabidopsis Argonaute1 cleavage activity to counter plant defense. Genes Dev 20: 3255-3268.
-
(2006)
Genes Dev
, vol.20
, pp. 3255-3268
-
-
Zhang, X.1
Yuan, Y.-R.2
Pei, Y.3
Lin, S.-S.4
Tuschl, T.5
-
75
-
-
67649371098
-
Suppression of RNA silencing by Flock house virus B2 protein is mediated through its interaction with the PAZ domain of Dicer
-
Singh G, Popli S, Hari Y, Malhotra P, Mukherjee S, et al. (2009) Suppression of RNA silencing by Flock house virus B2 protein is mediated through its interaction with the PAZ domain of Dicer. FASEB J 23: 1845-1857.
-
(2009)
FASEB J
, vol.23
, pp. 1845-1857
-
-
Singh, G.1
Popli, S.2
Hari, Y.3
Malhotra, P.4
Mukherjee, S.5
-
76
-
-
77950953211
-
Polerovirus protein P0 prevents the assembly of small RNA-containing RISC complexes and leads to degradation of ARGONAUTE1
-
Csorba T, Lózsa R, Hutvágner G, Burgyán J, (2010) Polerovirus protein P0 prevents the assembly of small RNA-containing RISC complexes and leads to degradation of ARGONAUTE1. Plant J 62: 463-472.
-
(2010)
Plant J
, vol.62
, pp. 463-472
-
-
Csorba, T.1
Lózsa, R.2
Hutvágner, G.3
Burgyán, J.4
-
77
-
-
0034925616
-
Aubergine encodes a Drosophila polar granule component required for pole cell formation and related to eIF2C
-
Harris AN, Macdonald PM, (2001) Aubergine encodes a Drosophila polar granule component required for pole cell formation and related to eIF2C. Development 128: 2823-2832.
-
(2001)
Development
, vol.128
, pp. 2823-2832
-
-
Harris, A.N.1
Macdonald, P.M.2
-
78
-
-
84859226958
-
Cis-by-trans regulatory divergence causes the asymmetric lethal effects of an ancestral hybrid incompatibility gene
-
doi:10.1371/journal.pgen.1002597
-
Maheshwari S, Barbash DA, (2012) Cis-by-trans regulatory divergence causes the asymmetric lethal effects of an ancestral hybrid incompatibility gene. PLoS Genet 8: e1002597 doi:10.1371/journal.pgen.1002597.
-
(2012)
PLoS Genet
, vol.8
-
-
Maheshwari, S.1
Barbash, D.A.2
-
79
-
-
2442458847
-
Construction of transgenic Drosophila by using the site-specific integrase from phage phiC31
-
Groth AC, Fish M, Nusse R, Calos MP, (2004) Construction of transgenic Drosophila by using the site-specific integrase from phage phiC31. Genetics 166: 1775-1782.
-
(2004)
Genetics
, vol.166
, pp. 1775-1782
-
-
Groth, A.C.1
Fish, M.2
Nusse, R.3
Calos, M.P.4
-
80
-
-
33845698104
-
P[acman]: a BAC transgenic platform for targeted insertion of large DNA fragments in D. melanogaster
-
Venken KJT, He Y, Hoskins RA, Bellen HJ, (2006) P[acman]: a BAC transgenic platform for targeted insertion of large DNA fragments in D. melanogaster. Science 314: 1747-1751.
-
(2006)
Science
, vol.314
, pp. 1747-1751
-
-
Venken, K.J.T.1
He, Y.2
Hoskins, R.A.3
Bellen, H.J.4
-
81
-
-
0028718066
-
Immunofluorescence analysis of the cytoskeleton during oogenesis and early embryogenesis
-
Theurkauf WE, (1994) Immunofluorescence analysis of the cytoskeleton during oogenesis and early embryogenesis. Methods Cell Biol 44: 489-505.
-
(1994)
Methods Cell Biol
, vol.44
, pp. 489-505
-
-
Theurkauf, W.E.1
-
82
-
-
0030723861
-
maelstrom is required for an early step in the establishment of Drosophila oocyte polarity: posterior localization of grk mRNA
-
Clegg NJ, Frost DM, Larkin MK, Subrahmanyan L, Bryant Z, et al. (1997) maelstrom is required for an early step in the establishment of Drosophila oocyte polarity: posterior localization of grk mRNA. Development 124: 4661-4671.
-
(1997)
Development
, vol.124
, pp. 4661-4671
-
-
Clegg, N.J.1
Frost, D.M.2
Larkin, M.K.3
Subrahmanyan, L.4
Bryant, Z.5
-
83
-
-
1642588268
-
The Drosophila SDE3 homolog armitage is required for oskar mRNA silencing and embryonic axis specification
-
Cook HA, Koppetsch BS, Wu J, Theurkauf WE, (2004) The Drosophila SDE3 homolog armitage is required for oskar mRNA silencing and embryonic axis specification. Cell 116: 817-829.
-
(2004)
Cell
, vol.116
, pp. 817-829
-
-
Cook, H.A.1
Koppetsch, B.S.2
Wu, J.3
Theurkauf, W.E.4
-
84
-
-
0035955361
-
An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
-
Lau NC, Lim LP, Weinstein EG, Bartel DP, (2001) An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans. Science 294: 858-862.
-
(2001)
Science
, vol.294
, pp. 858-862
-
-
Lau, N.C.1
Lim, L.P.2
Weinstein, E.G.3
Bartel, D.P.4
-
85
-
-
50649089207
-
RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays
-
Marioni JC, Mason CE, Mane SM, Stephens M, Gilad Y, (2008) RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. Genome Res 18: 1509-1517.
-
(2008)
Genome Res
, vol.18
, pp. 1509-1517
-
-
Marioni, J.C.1
Mason, C.E.2
Mane, S.M.3
Stephens, M.4
Gilad, Y.5
|