Quantification of lung damage in an elastase-induced mouse model of emphysema

International Journal of Biomedical Imaging

Volumn 2012, Issue , 2012, Pages

  Muñoz Barrutia, Arrate ^a   Ceresa, Mario ^a   Artaechevarria, Xabier ^a   Montuenga, Luis M ^a   Ortiz De Solorzano, Carlos ^a  

^a UNIVERSITY OF NAVARRA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

AREA UNDER THE CURVES; CYTOKINE EXPRESSION; CYTOKINES; DESCRIPTORS; ELASTASE; GROUND TRUTH; HISTOMORPHOMETRY; IN-VIVO; MICRO CT; MICROCOMPUTED TOMOGRAPHY; MOUSE MODELS; PARALLEL SOFTWARE; PULMONARY FUNCTION TEST; STATISTICALLY SIGNIFICANT DIFFERENCE; SUPPORT VECTOR CLASSIFIERS; TIME POINTS; WEIGHTED MEAN;

BIOLOGICAL ORGANS; MAMMALS; POLYMERASE CHAIN REACTION; RNA;

COMPUTERIZED TOMOGRAPHY;

EID: 84870202415     PISSN: 16874188     EISSN: 16874196     Source Type: Journal    
DOI: 10.1155/2012/734734     Document Type: Article

References (26)

1. Halbert R. J., Isonaka S., George D., Iqbal A., Interpreting COPD prevalence estimates: what is the true burden of disease? Chest 2003 123 5 1684 1692 2-s2.0-0038555320 10.1378/chest.123.5.1684 (Pubitemid 36549792)
2. Snider G. L., Kleinerman J., Thurlbeck W. M., Bengali Z. H., The definition of emphysema. Report of a National Heart, Lung and Blood Institute, Division of Lung Diseases workshop. American Review of Respiratory Disease 1985 132 1 182 185
3. Celli B. R., MacNee W., Agusti A., Standards for the diagnosis and treatment of patients with COPD: a summary of the ATS/ERS position paper. European Respiratory Journal 2004 23 6 932 946 10.1183/09031936.04.00014304 (Pubitemid 38807371)
4. Snider G. L., Emphysema: the first two centuries and beyond: a historical overview, with suggestions for future research: part 1. American Review of Respiratory Disease 1992 146 5, part 1 1334 1344 2-s2.0-0026954510
5. Mannino D. M., Buist A. S., Global burden of COPD: risk factors, prevalence, and future trends. The Lancet 2007 370 9589 765 773 2-s2.0-34548222188 10.1016/S0140-6736(07)61380-4 (Pubitemid 47321908)
6. Shapiro S. D., Animal models for COPD. Chest 2000 117 5, supplement 1 223S 227S 2-s2.0-0034079209 (Pubitemid 30326959)
7. Dunnill M. S., Quantitative methods in the study of pulmonary pathology. Thorax 1962 17 4 320 328 10.1136/thx.17.4.320
8. Robbesom A. A., Versteeg E. M. M., Veerkamp J. H., van Krieken J. H. J. M., Bulten H. J., Smits H. T. J., Willems L. N. A., van Herwaarden C. L. A., Dekhuijzen P. N. R., van Kuppevelt T. H., Morphological quantification of emphysema in small human lung specimens: comparison of methods and relation with clinical data. Modern Pathology 2003 16 1 1 7 2-s2.0-12244267102 10.1097/01.MP.0000043519.29370.C2 (Pubitemid 36152679)
9. Weibel E. R., Hsia C. C. W., Ochs M., How much is there really? Why stereology is essential in lung morphometry. Journal of Applied Physiology 2007 102 1 459 467 2-s2.0-33846167119 10.1152/japplphysiol.00808.2006 (Pubitemid 46089798)
10. Parameswaran H., Majumdar A., Ito S., Alencar A. M., Suki B., Quantitative characterization of airspace enlargement in emphysema. Journal of Applied Physiology 2006 100 1 186 193 2-s2.0-33644822447 10.1152/japplphysiol. 00424.2005 (Pubitemid 43671107)
11. Jacob R. E., Carson J. P., Gideon K. M., Amidan B. G., Smith C. L., Lee K. M., Comparison of two quantitative methods of discerning, airspace enlargement in smoke-exposed mice. PLoS ONE 2009 4 8 2-s2.0-68949216434 10.1371/journal.pone.0006670 e6670
12. Artaechevarria X., Blanco D., de Biurrun G., Ceresa M., Pérez-Martín D., Bastarrika G., de Torres J. P., Zulueta J. J., Montuenga L. M., Ortiz-de-Solorzano C., Munoz-Barrutia A., Evaluation of micro-CT for emphysema assessment in mice: comparison with non-radiological techniques. European Radiology 2011 21 5 954 962 2-s2.0-79954436375 10.1007/s00330-010-1982-5
13. Johnson K. A., Imaging techniques for small animal imaging models of pulmonary disease: micro-CT. Toxicologic Pathology 2007 35 1 59 64 2-s2.0-33847248880 10.1080/01926230601184262 (Pubitemid 46328403)
14. Lakatos H. F., Burgess H. A., Thatcher T. H., Redonnet M. R., Hernady E., Williams J. P., Sime P. J., Oropharyngeal aspiration of a silica suspension produces a superior model of silicosis in the mouse when compared to intratracheal instillation. Experimental Lung Research 2006 32 5 181 199 2-s2.0-33747609552 10.1080/01902140600817465 (Pubitemid 44266711)
15. Bates J. H. T., Irvin C. G., Measuring lung function in mice: the phenotyping uncertainty principle. Journal of Applied Physiology 2003 94 4 1297 1306 2-s2.0-0037377608 (Pubitemid 36348804)
16. Hu S., Hoffman E. A., Reinhardt J. M., Automatic lung segmentation for accurate quantitation of volumetric X-ray CT images. IEEE Transactions on Medical Imaging 2001 20 6 490 498 2-s2.0-0035354205 10.1109/42.929615 (Pubitemid 32657853)
17. Artaechevarria X., Pérez-Martín D., Ceresa M., de Biurrun G., Blanco D., Montuenga L. M., van Ginneken B., Ortiz-de-Solorzano C., Muñoz-Barrutia A., Airway segmentation and analysis for the study of mouse models of lung disease using micro-CT. Physics in Medicine and Biology 2009 54 22 7009 7024 2-s2.0-72249116051 10.1088/0031-9155/54/22/017
18. Barnes P. J., The cytokine network in chronic obstructive pulmonary disease. American Journal of Respiratory Cell and Molecular Biology 2009 41 6 631 638 2-s2.0-70949091447 10.1165/rcmb.2009-0220TR
19. Otsu N., A threshold selection method from gray-level histograms. IEEE Transactions on Systems, Man and Cybernetics 1979 9 1 62 66 10.1109/TSMC.1979. 4310076 (Pubitemid 9413341)
20. Preibisch S., Saalfeld S., Tomancak P., Globally optimal stitching of tiled 3D microscopic image acquisitions. Bioinformatics 2009 25 11 1463 1465 2-s2.0-65649134709 10.1093/bioinformatics/btp184
21. Rosin P. L., Unimodal thresholding. Pattern Recognition 2001 34 11 2083 2096 2-s2.0-0035501797 10.1016/S0031-3203(00)00136-9 (Pubitemid 32895207)
22. Clementini E., Di Felice P., van Oosterom P., A small set of formal topological relationships suitable for end-user interaction. Advances in Spatial Databases 1993 Springer 277 295
23. Egenhofer M., Herring J., Categorizing binary topological relations between regions, lines, and points in geographic databases. 1990 90-12 National Center for Geographic Information and Analysis, University of California
24. Shapely Phyton package, http://toblerity.github.com/shapely/
25. The R. Development Core Team, An introduction to R. 2012, http://cran.es.r-project.org/
26. Artaechevarria X., Blanco D., Pérez-Martín D., de Biurrun G., Montuenga L. M., de Torres J. P., Zulueta J. J., Bastarrika G., Muñoz-Barrutia A., Ortiz-de-Solorzano C., Longitudinal study of a mouse model of chronic pulmonary inflammation using breath hold gated micro-CT. European Radiology 2010 20 11 2600 2608 2-s2.0-77957873870 10.1007/s00330-010- 1853-0