메뉴 건너뛰기




Volumn 40, Issue 6, 2012, Pages 1389-1393

Quantitative image analysis approaches for probing Rab GTPase localization and function in mammalian cells

Author keywords

Image analysis; Image texture feature; Membrane traffic; Quantitative co localization; Rab GTPase

Indexed keywords

RAB PROTEIN;

EID: 84870155302     PISSN: 03005127     EISSN: 14708752     Source Type: Journal    
DOI: 10.1042/BST20120145     Document Type: Conference Paper
Times cited : (5)

References (25)
  • 2
    • 68049105101 scopus 로고    scopus 로고
    • Rab GTPases as coordinators of vesicle traffic
    • Stenmark, H. (2009) Rab GTPases as coordinators of vesicle traffic. Nat. Rev. Mol. Cell Biol. 10, 513-525
    • (2009) Nat. Rev. Mol. Cell Biol. , vol.10 , pp. 513-525
    • Stenmark, H.1
  • 3
    • 79959294945 scopus 로고    scopus 로고
    • Rab GTPases, membrane trafficking and diseases
    • Li, G. (2011) Rab GTPases, membrane trafficking and diseases. Curr. Drug Targets 12, 1188-1193
    • (2011) Curr. Drug Targets , vol.12 , pp. 1188-1193
    • Li, G.1
  • 4
    • 4444279082 scopus 로고    scopus 로고
    • Challenges and artifacts in quantitative photobleaching experiments
    • Weiss, M. (2004) Challenges and artifacts in quantitative photobleaching experiments. Traffic 5, 662-671
    • (2004) Traffic , vol.5 , pp. 662-671
    • Weiss, M.1
  • 7
    • 77953144320 scopus 로고    scopus 로고
    • Rab33b and Rab6 are functionally overlapping regulators of Golgi homeostasis and trafficking
    • Starr, T., Sun, Y., Wilkins, N. and Storrie, B. (2010) Rab33b and Rab6 are functionally overlapping regulators of Golgi homeostasis and trafficking. Traffic 11, 626-636
    • (2010) Traffic , vol.11 , pp. 626-636
    • Starr, T.1    Sun, Y.2    Wilkins, N.3    Storrie, B.4
  • 9
    • 34250868366 scopus 로고    scopus 로고
    • Confocal microscopy-based linescan methodologies for intra-Golgi localization of proteins
    • DOI 10.1369/jhc.6A7090.2007
    • Dejgaard, S.Y., Murshid, A., Dee, K.M. and Presley, J.F. (2007) Confocal microscopy-based linescan methodologies for intra-Golgi localization of proteins. J. Histochem. Cytochem. 55, 709-719 (Pubitemid 46981769)
    • (2007) Journal of Histochemistry and Cytochemistry , vol.55 , Issue.7 , pp. 709-719
    • Dejgaard, S.Y.1    Murshid, A.2    Dee, K.M.3    Presley, J.F.4
  • 12
    • 80052264931 scopus 로고    scopus 로고
    • Distinct roles of Rab11 and Arf6 in the regulation of Rab11-FIP3/arfophilin-1 localization in mitotic cells
    • Takahashi, S., Takei, T., Koga, H., Takatsu, H., Shin, H.W. and Nakayama, K. (2011) Distinct roles of Rab11 and Arf6 in the regulation of Rab11-FIP3/arfophilin-1 localization in mitotic cells. Genes Cells 16, 938-950
    • (2011) Genes Cells , vol.16 , pp. 938-950
    • Takahashi, S.1    Takei, T.2    Koga, H.3    Takatsu, H.4    Shin, H.W.5    Nakayama, K.6
  • 13
    • 81055156730 scopus 로고    scopus 로고
    • Semi-automated analysis of organelle movement and membrane content: Understanding Rab-Motor complex transport function
    • Hume, A.N., Wilson, M.S., Ushakov, D.S., Ferenczi, M.A. and Seabra, M.C. (2011) Semi-automated analysis of organelle movement and membrane content: understanding Rab-Motor complex transport function. Traffic 12, 1686-1701
    • (2011) Traffic , vol.12 , pp. 1686-1701
    • Hume, A.N.1    Wilson, M.S.2    Ushakov, D.S.3    Ferenczi, M.A.4    Seabra, M.C.5
  • 14
    • 80051659653 scopus 로고    scopus 로고
    • Single particle tracking as a method to resolve differences in highly colocalized proteins
    • Szymanski, C.J., Humphries, IV, W.H. and Payne, C.K. (2011) Single particle tracking as a method to resolve differences in highly colocalized proteins. Analyst 136, 3527-3533
    • (2011) Analyst , vol.136 , pp. 3527-3533
    • Szymanski, C.J.1    Humphries IV, W.H.2    Payne, C.K.3
  • 15
    • 80055060433 scopus 로고    scopus 로고
    • Endo-lysosomal vesicles positive for Rab7 and LAMP1 are terminal vesicles for the transport of dextran
    • Humphries, I.V., W.H., Szymanski, C.J. and Payne, C.K. (2011) Endo-lysosomal vesicles positive for Rab7 and LAMP1 are terminal vesicles for the transport of dextran. PLoS ONE 6, e26626
    • (2011) PLoS ONE , vol.6
    • Humphries I.V., W.H.1    Szymanski, C.J.2    Payne, C.K.3
  • 16
    • 84857714396 scopus 로고    scopus 로고
    • High-speed imaging of Rab family small GTPases reveals rare events in nanoparticle trafficking in living cells
    • Sandin, P., Fitzpatrick, L.W., Simpson, J.C. and Dawson, K.A. (2012) High-speed imaging of Rab family small GTPases reveals rare events in nanoparticle trafficking in living cells. ACS Nano 6, 1513-1521
    • (2012) ACS Nano , vol.6 , pp. 1513-1521
    • Sandin, P.1    Fitzpatrick, L.W.2    Simpson, J.C.3    Dawson, K.A.4
  • 19
    • 33845764296 scopus 로고    scopus 로고
    • A guided tour into subcellular colocalization analysis in light microscopy
    • DOI 10.1111/j.1365-2818.2006.01706.x
    • Bolte, S. and Cordelières, F.P. (2006) A guided tour into subcellular colocalization analysis in light microscopy. J. Microsc. 224, 213-232 (Pubitemid 46010930)
    • (2006) Journal of Microscopy , vol.224 , Issue.3 , pp. 213-232
    • Bolte, S.1    Cordelieres, F.P.2
  • 20
    • 80054752054 scopus 로고    scopus 로고
    • Dual channel rank-based intensity weighting for quantitative co-localization of microscopy images
    • Singan, V.R., Jones, T.R., Curran, K.M. and Simpson, J.C. (2011) Dual channel rank-based intensity weighting for quantitative co-localization of microscopy images. BMC Bioinf. 12, 407
    • (2011) BMC Bioinf. , vol.12 , pp. 407
    • Singan, V.R.1    Jones, T.R.2    Curran, K.M.3    Simpson, J.C.4
  • 21
    • 0032212323 scopus 로고    scopus 로고
    • Automated recognition of patterns characteristic of subcellular structures in fluorescence microscopy images
    • DOI 10.1002/(SICI)1097-0320(19981101)33:3<366::AID-CYTO12>3.0.CO;2- R
    • Boland, M.V., Markey, M.K. and Murphy, R.F. (1998) Automated recognition of patterns characteristic of subcellular structures in fluorescence microscopy images. Cytometry 33, 366-375 (Pubitemid 28492382)
    • (1998) Cytometry , vol.33 , Issue.3 , pp. 366-375
    • Boland, M.V.1    Markey, M.K.2    Murphy, R.F.3
  • 22
    • 49849090542 scopus 로고    scopus 로고
    • A framework for the automated analysis of subcellular patterns in human protein atlas images
    • Newberg, J. and Murphy, R.F. (2008) A framework for the automated analysis of subcellular patterns in human protein atlas images. J. Proteome Res. 7, 2300-2308
    • (2008) J. Proteome Res. , vol.7 , pp. 2300-2308
    • Newberg, J.1    Murphy, R.F.2
  • 23
    • 33845760114 scopus 로고    scopus 로고
    • Automated Subcellular Location Determination and High-Throughput Microscopy
    • DOI 10.1016/j.devcel.2006.12.007, PII S1534580706005703
    • Glory, E. and Murphy, R.F. (2007) Automated subcellular location determination and high-throughput microscopy. Dev. Cell 12, 7-16 (Pubitemid 46002604)
    • (2007) Developmental Cell , vol.12 , Issue.1 , pp. 7-16
    • Glory, E.1    Murphy, R.F.2
  • 24
    • 39749153580 scopus 로고    scopus 로고
    • Visualizing and clustering high throughput sub-cellular localization imaging
    • Hamilton, N.A. and Teasdale, R.D. (2008) Visualizing and clustering high throughput sub-cellular localization imaging. BMC Bioinf. 9, 81
    • (2008) BMC Bioinf. , vol.9 , pp. 81
    • Hamilton, N.A.1    Teasdale, R.D.2
  • 25
    • 84861947787 scopus 로고    scopus 로고
    • A method for improved clustering and classification of microscopy images using quantitative co-localization coefficients
    • Singan, V.R., Handzic, K., Curran, K.M. and Simpson, J.C. (2012) A method for improved clustering and classification of microscopy images using quantitative co-localization coefficients. BMC Res. Notes 5, 281
    • (2012) BMC Res. Notes , vol.5 , pp. 281
    • Singan, V.R.1    Handzic, K.2    Curran, K.M.3    Simpson, J.C.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.