Phylogeny and molecular typing of Mycoplasma agalactiae and Mycoplasma bovis by multilocus sequencing

Veterinary Microbiology

Volumn 161, Issue 1-2, 2012, Pages 104-112

  Manso Silván, Lucía ^a   Dupuy, Virginie ^a   Lysnyansky, Inna ^b   Ozdemir, Umit ^c   Thiaucourt, François ^a  

^a UMR ASTRE   (France)

^b KIMRON VETERINARY INSTITUTE   (Israel)

^c Pendik Veteriner Kontrol ve Arastirma Enstitusu   (Turkey)

Author keywords

Multilocus sequence typing; Mycoplasma agalactiae; Mycoplasma bovis; Phylogeny

Indexed keywords

ARTICLE; BACTERIAL STRAIN; BELGIUM; CAMEROON; ETHIOPIA; FRANCE; GERMANY; GREECE; INDIA; ISRAEL; MICROBIAL DIVERSITY; MOLECULAR TYPING; MULTILOCUS SEQUENCE TYPING; MYCOPLASMA AGALACTIAE; MYCOPLASMA BOVIS; NONHUMAN; PHYLOGENY; PORTUGAL; ROMANIA; SAUDI ARABIA; SENEGAL; SPAIN; SUDAN; SWITZERLAND; TURKEY (REPUBLIC); UNITED STATES;

ANIMALS; BIODIVERSITY; CATTLE; GENES, BACTERIAL; GENETIC VARIATION; GENOTYPE; ISRAEL; MULTILOCUS SEQUENCE TYPING; MYCOPLASMA AGALACTIAE; MYCOPLASMA BOVIS; PHYLOGENY; POLYMERASE CHAIN REACTION; SPECIES SPECIFICITY; TURKEY;

BOS; MYCOPLASMA AGALACTIAE; MYCOPLASMA BOVIS;

EID: 84869878390     PISSN: 03781135     EISSN: 18732542     Source Type: Journal    
DOI: 10.1016/j.vetmic.2012.07.015     Document Type: Article

References (26)

1. Askaa G., Erno H. Elevation of Mycoplasma agalactiae subsp. bovis to species rank: Mycoplasma bovis (Hale et al.) comb. nov. Int. J. Syst. Bacteriol. 1976, 26:323-325.
2. Bashiruddin J.B., Frey J., Konigsson M.H., Johansson K.E., Hotzel H., Diller R., de Santis P., Botelho A., Ayling R.D., Nicholas R.A., Thiaucourt F., Sachse K. Evaluation of PCR systems for the identification and differentiation of Mycoplasma agalactiae and Mycoplasma bovis: a collaborative trial. Vet. J. 2005, 169:268-275.
3. Bergonier D., Berthelot X., Poumarat F. Contagious agalactia of small ruminants: current knowledge concerning epidemiology, diagnosis and control. Rev. Sci. Tech. 1997, 16:848-873.
4. Carrico J.A., Silva-Costa C., Melo-Cristino J., Pinto F.R., de Lencastre H., Almeida J.S., Ramirez M. Illustration of a common framework for relating multiple typing methods by application to macrolide-resistant Streptococcus pyogenes. J. Clin. Microbiol. 2006, 44:2524-2532.
5. Gevers D., Cohan F.M., Lawrence J.G., Spratt B.G., Coenye T., Feil E.J., Stackebrandt E., Van de Peer Y., Vandamme P., Thompson F.L., Swings J. Opinion: re-evaluating prokaryotic species. Nat. Rev. Microbiol. 2005, 3:733-739.
6. Grundmann H., Hori S., Tanner G. Determining confidence intervals when measuring genetic diversity and the discriminatory abilities of typing methods for microorganisms. J. Clin. Microbiol. 2001, 39:4190-4192.
7. Hunter P., Gaston M.A. Numerical index of the discriminatory ability of typig systems: an application of Simpsom's index of diversity. J. Clin. Microbiol. 1988, 26:2465-2466.
8. Konigsson M.H., Bolske G., Johansson K.E. Intraspecific variation in the 16S rRNA gene sequences of Mycoplasma agalactiae and Mycoplasma bovis strains. Vet. Microbiol. 2002, 85:209-220.
9. Maiden M.C., Bygraves J.A., Feil E., Morelli G., Russell J.E., Urwin R., Zhang Q., Zhou J., Zurth K., Caugant D.A., Feavers I.M., Achtman M., Spratt B.G. Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms. Proc. Natl. Acad. Sci. U.S.A. 1998, 95:3140-3145.
10. Manso-Silvan L., Perrier X., Thiaucourt F. Phylogeny of the Mycoplasma mycoides cluster based on analysis of five conserved protein-coding sequences and possible implications for the taxonomy of the group. Int. J. Syst. Evol. Microbiol. 2007, 57:2247-2258.
11. Manso-Silvan L., Vilei E.M., Sachse K., Djordjevic S.P., Thiaucourt F., Frey J. Mycoplasma leachii sp. nov. as a new species designation for Mycoplasma sp. bovine group 7 of Leach, and reclassification of Mycoplasma mycoides subsp. mycoides LC as a serovar of Mycoplasma mycoides subsp. capri. Int. J. Syst. Evol. Microbiol. 2009, 59:1353-1358.
12. Marenda M.S., Sagne E., Poumarat F., Citti C. Suppression subtractive hybridization as a basis to assess Mycoplasma agalactiae and Mycoplasma bovis genomic diversity and species-specific sequences. Microbiology 2005, 151:475-489.
13. Martin D.P., Lemey P., Lott M., Moulton V., Posada D., Lefeuvre P. RDP3: a flexible and fast computer program for analyzing recombination. Bioinformatics 2010, 26:2462-2463.
14. Maunsell F.P., Woolums A.R., Francoz D., Rosenbusch R.F., Step D.L., Wilson D.J., Janzen E.D. Mycoplasma bovis infections in cattle. J. Vet. Intern. Med. 2011, 25:772-783.
15. Mayor D., Jores J., Korczak B.M., Kuhnert P. Multilocus sequence typing (MLST) of Mycoplasma hyopneumoniae: a diverse pathogen with limited clonality. Vet. Microbiol. 2008, 127:63-72.
16. McAuliffe L., Churchward C.P., Lawes J.R., Loria G., Ayling R.D., Nicholas R.A. VNTR analysis reveals unexpected genetic diversity within Mycoplasma agalactiae, the main causative agent of contagious agalactia. BMC Microbiol. 2008, 8:193.
17. McAuliffe L., Gosney F., Hlusek M., de Garnica M.L., Spergser J., Kargl M., Rosengarten R., Ayling R.D., Nicholas R.A., Ellis R.J. Multi locus sequence typing of Mycoplasma agalactiae. J. Med. Microbiol. 2011, 60:803-811.
18. Nicholas R.A., Ayling R.D. Mycoplasma bovis: disease, diagnosis, and control. Res. Vet. Sci. 2003, 74:105-112.
19. Perrier X., Flori A., Bonnot F. Data analysis methods. Genetic Diversity of Cultivated Tropical Plants 2003, 43-76. Science Publishers, Enfield. P. Hamon, M. Seguin, X. Perrier, J.C. Glaszmann (Eds.).
20. Pettersson B., Uhlen M., Johansson K.E. Phylogeny of some mycoplasmas from ruminants based on 16S rRNA sequences and definition of a new cluster within the hominis group. Int. J. Syst. Bacteriol. 1996, 46:1093-1098.
21. Pfutzner H., Sachse K. Mycoplasma bovis as an agent of mastitis, pneumonia, arthritis and genital disorders in cattle. Rev. Sci. Tech. 1996, 15:1477-1494.
22. Sirand-Pugnet P., Lartigue C., Marenda M., Jacob D., Barre A., Barbe V., Schenowitz C., Mangenot S., Couloux A., Segurens B., de Daruvar A., Blanchard A., Citti C. Being pathogenic, plastic, and sexual while living with a nearly minimal bacterial genome. PLoS Genet. 2007, 3:e75.
23. Subramaniam S., Bergonier D., Poumarat F., Capaul S., Schlatter Y., Nicolet J., Frey J. Species identification of Mycoplasma bovis and Mycoplasma agalactiae based on the uvrC genes by PCR. Mol. Cell. Probes 1998, 12:161-169.
24. Tamura K., Dudley J., Nei M., Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 2007, 24:1596-1599.
25. Thiaucourt F., Bolske G. Contagious caprine pleuropneumonia and other pulmonary mycoplasmoses of sheep and goats. Rev. Sci. Tech. 1996, 15:1397-1414.
26. van Belkum A., Tassios P.T., Dijkshoorn L., Haeggman S., Cookson B., Fry N.K., Fussing V., Green J., Feil E., Gerner-Smidt P., Brisse S., Struelens M. Guidelines for the validation and application of typing methods for use in bacterial epidemiology. Clin. Microbiol. Infect. 2007, 13(Suppl. 3):1-46.