-
1
-
-
0030586737
-
The mutation rate of human immunodeficiency virus type 1 is influenced by the vpr gene
-
DOI 10.1006/viro.1996.0436
-
The mutation rate of human immunodeficiency virus type 1 is influenced by the vpr gene. Mansky LM, Virology 1996 222 2 391 400 10.1006/viro.1996.0436 8806523 (Pubitemid 26279184)
-
(1996)
Virology
, vol.222
, Issue.2
, pp. 391-400
-
-
Mansky, L.M.1
-
2
-
-
0029075130
-
Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase
-
7541846
-
Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase. Mansky LM, Temin HM, J Virol 1995 69 8 5087 5094 7541846
-
(1995)
J Virol
, vol.69
, Issue.8
, pp. 5087-5094
-
-
Mansky, L.M.1
Temin, H.M.2
-
3
-
-
0029967721
-
HIV-1 dynamics in vivo: Virion clearance rate, infected cell life-span, and viral generation time
-
HIV-1 dynamics in vivo: virion clearance rate, infected cell life-span, and viral generation time. Perelson AS, Neumann AU, Markowitz M, Leonard JM, Ho DD, Science 1996 271 5255 1582 1586 10.1126/science.271.5255.1582 8599114 (Pubitemid 26097216)
-
(1996)
Science
, vol.271
, Issue.5255
, pp. 1582-1586
-
-
Perelson, A.S.1
Neumann, A.U.2
Markowitz, M.3
Leonard, J.M.4
Ho, D.D.5
-
4
-
-
0032581582
-
Transmission of multidrug-resistant human immunodeficiency virus - The wake-up call
-
DOI 10.1056/NEJM199807303390511
-
Transmission of multidrug-resistant human immunodeficiency virus-the wake-up call. Cohen OJ, Fauci AS, N Engl J Med 1998 339 5 341 343 10.1056/NEJM199807303390511 9682050 (Pubitemid 28366426)
-
(1998)
New England Journal of Medicine
, vol.339
, Issue.5
, pp. 341-343
-
-
Cohen, O.J.1
Fauci, A.S.2
-
5
-
-
33846502673
-
Is HIV-1 evolving to a less virulent form in humans?
-
DOI 10.1038/nrmicro1594, PII NRMICRO1594
-
Is HIV-1 evolving to a less virulent form in humans? Arien KK, Vanham G, Arts EJ, Nat Rev Microbiol 2007 5 2 141 151 10.1038/nrmicro1594 17203103 (Pubitemid 46151872)
-
(2007)
Nature Reviews Microbiology
, vol.5
, Issue.2
, pp. 141-151
-
-
Arien, K.K.1
Vanham, G.2
Arts, E.J.3
-
6
-
-
0032993507
-
Lack of protection against HIV-1 infection among women with HIV-2 infection
-
DOI 10.1097/00002030-199904160-00010
-
Lack of protection against HIV-1 infection among women with HIV-2 infection. Wiktor SZ, Nkengasong JN, Ekpini ER, Adjorlolo-Johnson GT, Ghys PD, Brattegaard K, Tossou O, Dondero TJ, De Cock KM, Greenberg AE, AIDS 1999 13 6 695 699 10.1097/00002030-199904160-00010 10397564 (Pubitemid 29286704)
-
(1999)
AIDS
, vol.13
, Issue.6
, pp. 695-699
-
-
Wiktor, S.Z.1
Nkengasong, J.N.2
Ekpini, E.R.3
Adjorlolo-Johnson, G.T.4
Ghys, P.D.5
Brattegaard, K.6
Tossou, O.7
Dondero, T.J.8
De Cock, K.M.9
Greenberg, A.E.10
-
7
-
-
66949132933
-
HIV-1 superinfection in an HIV-2-infected woman with subsequent control of HIV-1 plasma viremia
-
10.1086/598987 19382874
-
HIV-1 superinfection in an HIV-2-infected woman with subsequent control of HIV-1 plasma viremia. Gunthard HF, Huber M, Kuster H, Shah C, Schupbach J, Trkola A, Boni J, Clin Infect Dis 2009 48 11 117 e120 10.1086/598987 19382874
-
(2009)
Clin Infect Dis
, vol.48
, Issue.11
-
-
Gunthard, H.F.1
Huber, M.2
Kuster, H.3
Shah, C.4
Schupbach, J.5
Trkola, A.6
Boni, J.7
-
8
-
-
0030635508
-
Triple HIV-1 infection with group O and Group M of different clades in a single Cameroonian AIDS patient
-
10.1097/00042560-199701010-00015 8989217
-
Triple HIV-1 infection with group O and Group M of different clades in a single Cameroonian AIDS patient. Takehisa J, Zekeng L, Miura T, Ido E, Yamashita M, Mboudjeka I, Gurtler LG, Hayami M, Kaptue L, J Acquir Immune Defic Syndr Hum Retrovirol 1997 14 1 81 82 10.1097/00042560-199701010-00015 8989217
-
(1997)
J Acquir Immune Defic Syndr Hum Retrovirol
, vol.14
, Issue.1
, pp. 81-82
-
-
Takehisa, J.1
Zekeng, L.2
Miura, T.3
Ido, E.4
Yamashita, M.5
Mboudjeka, I.6
Gurtler, L.G.7
Hayami, M.8
Kaptue, L.9
-
9
-
-
0035831150
-
HIV-1 genetic diversity in Galicia Spain: BG intersubtype recombinant viruses circulating among injecting drug users
-
DOI 10.1097/00002030-200103090-00010
-
HIV-1 genetic diversity in Galicia Spain: BG intersubtype recombinant viruses circulating among injecting drug users. Thomson MM, Delgado E, Manjon N, Ocampo A, Villahermosa ML, Marino A, Herrero I, Cuevas MT, Vazquez-de Parga E, Perez-Alvarez L, et al. AIDS 2001 15 4 509 516 10.1097/00002030-200103090-00010 11242148 (Pubitemid 32207571)
-
(2001)
AIDS
, vol.15
, Issue.4
, pp. 509-516
-
-
Thomson, M.M.1
Delgado, E.2
Manjon, N.3
Ocampo, A.4
Villahermosa, M.L.5
Marino, A.6
Herrero, I.7
Cuevas, M.T.8
Parga, E.V.-D.9
Perez-Alvarez, L.10
Medrano, L.11
Taboada, J.A.12
Najera, R.13
-
10
-
-
0037131204
-
Detection of HIV-1 subtypes, recombinants, and dual infections in east Africa by a multi-region hybridization assay
-
DOI 10.1097/00002030-200210180-00011
-
Detection of HIV-1 subtypes, recombinants, and dual infections in east Africa by a multi-region hybridization assay. Hoelscher M, Dowling WE, Sanders-Buell E, Carr JK, Harris ME, Thomschke A, Robb ML, Birx DL, McCutchan FE, AIDS 2002 16 15 2055 2064 10.1097/00002030-200210180-00011 12370505 (Pubitemid 35205270)
-
(2002)
AIDS
, vol.16
, Issue.15
, pp. 2055-2064
-
-
Hoelscher, M.1
Dowling, W.E.2
Sanders-Buell, E.3
Carr, J.K.4
Harris, M.E.5
Thomschke, A.6
Robb, M.L.7
Birx, D.L.8
McCutchan, F.E.9
-
11
-
-
0033451459
-
Presence of multiple HIV subtypes and a high frequency of subtype chimeric viruses in heterosexually infected women
-
Presence of multiple HIV subtypes and a high frequency of subtype chimeric viruses in heterosexually infected women. Iversen AK, Learn GH, Fugger L, Gerstoft J, Mullins JI, Skinhoj P, J Acquir Immune Defic Syndr 1999 22 4 325 332 10634193 (Pubitemid 30030423)
-
(1999)
Journal of Acquired Immune Deficiency Syndromes and Human Retrovirology
, vol.22
, Issue.4
, pp. 325-332
-
-
Iversen, A.K.N.1
Learn, G.H.2
Fugger, L.3
Gerstoft, J.4
Mullins, J.I.5
Skinhoj, P.6
-
12
-
-
0028947028
-
Dual infection with human immunodeficiency virus type 1 of distinct envelope subtypes in humans
-
10.1093/infdis/171.4.805 7706806
-
Dual infection with human immunodeficiency virus type 1 of distinct envelope subtypes in humans. Artenstein AW, VanCott TC, Mascola JR, Carr JK, Hegerich PA, Gaywee J, Sanders-Buell E, Robb ML, Dayhoff DE, Thitivichianlert S, et al. J Infect Dis 1995 171 4 805 810 10.1093/infdis/171.4.805 7706806
-
(1995)
J Infect Dis
, vol.171
, Issue.4
, pp. 805-810
-
-
Artenstein, A.W.1
Vancott, T.C.2
Mascola, J.R.3
Carr, J.K.4
Hegerich, P.A.5
Gaywee, J.6
Sanders-Buell, E.7
Robb, M.L.8
Dayhoff, D.E.9
Thitivichianlert, S.10
-
13
-
-
0034632807
-
Identification of diverse HIV type 1 subtypes and dual HIV type 1 infection in pregnant Ugandan women
-
DOI 10.1089/088922200414938
-
Identification of diverse HIV type 1 subtypes and dual HIV type 1 infection in pregnant Ugandan women. Becker-Pergola G, Mellquist JL, Guay L, Mmiro F, Ndugwa C, Kataaha P, Jackson JB, Eshleman SH, AIDS Res Hum Retroviruses 2000 16 12 1099 1104 10.1089/088922200414938 10954884 (Pubitemid 30637011)
-
(2000)
AIDS Research and Human Retroviruses
, vol.16
, Issue.12
, pp. 1099-1104
-
-
Becker-Pergola, G.1
Mellquist, J.L.2
Guay, L.3
Mmiro, F.4
Ndugwa, C.5
Kataaha, P.6
Jackson, J.B.7
Eshleman, S.H.8
-
14
-
-
10344222183
-
Identification of single and dual infections with distinct subtypes of human immunodeficiency virus type 1 by using restriction fragment length polymorphism analysis
-
DOI 10.1007/BF00576981
-
Identification of single and dual infections with distinct subtypes of human immunodeficiency virus type 1 by using restriction fragment length polymorphism analysis. Janini LM, Pieniazek D, Peralta JM, Schechter M, Tanuri A, Vicente AC, dela Torre N, Pieniazek NJ, Luo CC, Kalish ML, et al. Virus Genes 1996 13 1 69 81 10.1007/BF00576981 8938982 (Pubitemid 26377628)
-
(1996)
Virus Genes
, vol.13
, Issue.1
, pp. 69-81
-
-
Janini, L.M.1
Pieniazek, D.2
Peralta, J.M.3
Schechter, M.4
Tanuri, A.5
Vicente, A.C.P.6
Dela Torre, N.7
Pieniazek, N.J.8
Luo, C.-C.9
Kalish, M.L.10
Schochetman, G.11
Rayfield, M.A.12
-
15
-
-
0032978041
-
Dual and recombinant infections: An integral part of the HIV-1 epidemic in Brazil
-
Dual and recombinant infections: an integral part of the HIV-1 epidemic in Brazil. Ramos A, Tanuri A, Schechter M, Rayfield MA, Hu DJ, Cabral MC, Bandea CI, Baggs J, Pieniazek D, Emerg Infect Dis 1999 5 1 65 74 10.3201/eid0501. 990108 10081673 (Pubitemid 29124776)
-
(1999)
Emerging Infectious Diseases
, vol.5
, Issue.1
, pp. 65-74
-
-
Ramos, A.1
Tanuri, A.2
Schechter, M.3
Rayfield, M.A.4
Hu, D.J.5
Cabral, M.C.6
Bandea, C.I.7
Baggs, J.8
Pieniazek, D.9
-
16
-
-
79961113618
-
Detection of HIV-1 dual infections in highly exposed treated patients
-
10.1186/1743-422X-8-392 21824422
-
Detection of HIV-1 dual infections in highly exposed treated patients. Andreani G, Espada C, Ceballos A, Ambrosioni J, Petroni A, Pugliese D, Bouzas MB, Fernandez Giuliano S, Weissenbacher MC, Losso M, et al. Virol J 2011 8 392 10.1186/1743-422X-8-392 21824422
-
(2011)
Virol J
, vol.8
, pp. 392
-
-
Andreani, G.1
Espada, C.2
Ceballos, A.3
Ambrosioni, J.4
Petroni, A.5
Pugliese, D.6
Bouzas, M.B.7
Fernandez Giuliano, S.8
Weissenbacher, M.C.9
Losso, M.10
-
17
-
-
0029069857
-
Dual human immunodeficiency virus type 1 infection and recombination in a dually exposed transfusion recipient. The Transfusion Safety Study Group
-
7745674
-
Dual human immunodeficiency virus type 1 infection and recombination in a dually exposed transfusion recipient. The Transfusion Safety Study Group. Diaz RS, Sabino EC, Mayer A, Mosley JW, Busch MP, J Virol 1995 69 6 3273 3281 7745674
-
(1995)
J Virol
, vol.69
, Issue.6
, pp. 3273-3281
-
-
Diaz, R.S.1
Sabino, E.C.2
Mayer, A.3
Mosley, J.W.4
Busch, M.P.5
-
18
-
-
0036838722
-
Selection for human immunodeficiency virus type 1 recombinants in a patient with rapid progression to AIDS
-
DOI 10.1128/JVI.76.21.10674-10684.2002
-
Selection for human immunodeficiency virus type 1 recombinants in a patient with rapid progression to AIDS. Liu SL, Mittler JE, Nickle DC, Mulvania TM, Shriner D, Rodrigo AG, Kosloff B, He X, Corey L, Mullins JI, J Virol 2002 76 21 10674 10684 10.1128/JVI.76.21.10674-10684.2002 12368309 (Pubitemid 35176183)
-
(2002)
Journal of Virology
, vol.76
, Issue.21
, pp. 10674-10684
-
-
Liu, S.-L.1
Mittler, J.E.2
Nickle, D.C.3
Mulvania, T.M.4
Shriner, D.5
Rodrigo, A.G.6
Kosloff, B.7
He, X.8
Corey, L.9
Mullins, J.I.10
-
19
-
-
0028815682
-
Evidence for coinfection by multiple strains of human immunodeficiency virus type 1 subtype B in an acute seroconvertor
-
7815515
-
Evidence for coinfection by multiple strains of human immunodeficiency virus type 1 subtype B in an acute seroconvertor. Zhu T, Wang N, Carr A, Wolinsky S, Ho DD, J Virol 1995 69 2 1324 1327 7815515
-
(1995)
J Virol
, vol.69
, Issue.2
, pp. 1324-1327
-
-
Zhu, T.1
Wang, N.2
Carr, A.3
Wolinsky, S.4
Ho, D.D.5
-
20
-
-
0029028448
-
HIV-1 gp120 sequences from a doubly infected drug user
-
10.1089/aid.1995.11.653 7576923
-
HIV-1 gp120 sequences from a doubly infected drug user. Sala M, Pelletier E, Wain-Hobson S, AIDS Res Hum Retroviruses 1995 11 5 653 655 10.1089/aid.1995.11.653 7576923
-
(1995)
AIDS Res Hum Retroviruses
, vol.11
, Issue.5
, pp. 653-655
-
-
Sala, M.1
Pelletier, E.2
Wain-Hobson, S.3
-
21
-
-
10744233573
-
Dual HIV-1 infection associated with rapid disease progression
-
DOI 10.1016/S0140-6736(04)15596-7
-
Dual HIV-1 infection associated with rapid disease progression. Gottlieb GS, Nickle DC, Jensen MA, Wong KG, Grobler J, Li F, Liu SL, Rademeyer C, Learn GH, Karim SS, et al. Lancet 2004 363 9409 619 622 10.1016/S0140-6736(04)15596-7 14987889 (Pubitemid 38264182)
-
(2004)
Lancet
, vol.363
, Issue.9409
, pp. 619-622
-
-
Gottlieb, G.S.1
Nickle, D.C.2
Jensen, M.A.3
Wong, K.G.4
Grobler, J.5
Li, F.6
Liu, S.-L.7
Rademeyer, C.8
Learn, G.H.9
Karim, S.S.A.10
Williamson, C.11
Corey, L.12
Margolick, J.B.13
Mullins, J.I.14
-
22
-
-
81755174499
-
HIV type 1 subtype distribution, multiple infections, sexual networks, and partnership histories in female sex workers in Kampala, Uganda
-
10.1089/aid.2011.0024 21749285
-
HIV type 1 subtype distribution, multiple infections, sexual networks, and partnership histories in female sex workers in Kampala, Uganda. Ssemwanga D, Ndembi N, Lyagoba F, Bukenya J, Seeley J, Vandepitte J, Grosskurth H, Kaleebu P, AIDS Res Hum Retroviruses 2012 28 4 357 365 10.1089/aid.2011.0024 21749285
-
(2012)
AIDS Res Hum Retroviruses
, vol.28
, Issue.4
, pp. 357-365
-
-
Ssemwanga, D.1
Ndembi, N.2
Lyagoba, F.3
Bukenya, J.4
Seeley, J.5
Vandepitte, J.6
Grosskurth, H.7
Kaleebu, P.8
-
23
-
-
79953196535
-
HIV and Other Sexually Transmitted Infections in a Cohort of Women Involved in High-Risk Sexual Behavior in Kampala, Uganda
-
310.1097/OLQ.1090b1013e3182099545
-
HIV and Other Sexually Transmitted Infections in a Cohort of Women Involved in High-Risk Sexual Behavior in Kampala, Uganda. Vandepitte J, Bukenya J, Weiss HA, Nakubulwa S, Francis SC, Hughes P, Hayes R, Grosskurth H, Sex Transm Dis 2011 38 4 316 323 310.1097/OLQ.1090b1013e3182099545
-
(2011)
Sex Transm Dis
, vol.38
, Issue.4
, pp. 316-323
-
-
Vandepitte, J.1
Bukenya, J.2
Weiss, H.A.3
Nakubulwa, S.4
Francis, S.C.5
Hughes, P.6
Hayes, R.7
Grosskurth, H.8
-
24
-
-
0242491896
-
Infection with Multiple Human Immunodeficiency Virus Type 1 Variants is Associated with Faster Disease Progression
-
DOI 10.1128/JVI.77.23.12921-12926.2003
-
Infection with multiple human immunodeficiency virus type 1 variants is associated with faster disease progression. Sagar M, Lavreys L, Baeten JM, Richardson BA, Mandaliya K, Chohan BH, Kreiss JK, Overbaugh J, J Virol 2003 77 23 12921 12926 10.1128/JVI.77.23.12921-12926.2003 14610215 (Pubitemid 37430688)
-
(2003)
Journal of Virology
, vol.77
, Issue.23
, pp. 12921-12926
-
-
Sagar, M.1
Lavreys, L.2
Baeten, J.M.3
Richardson, B.A.4
Mandaliya, K.5
Chohan, B.H.6
Kreiss, J.K.7
Overbaugh, J.8
-
25
-
-
25144497593
-
Establishment of the serologic testing algorithm for recent human immunodeficiency virus (HIV) seroconversion (STARHS) strategy in the city of Sao Paulo, Brazil
-
15880230
-
Establishment of the serologic testing algorithm for recent human immunodeficiency virus (HIV) seroconversion (STARHS) strategy in the city of Sao Paulo, Brazil. Kallas EG, Bassichetto KC, Oliveira SM, Goldenberg I, Bortoloto R, Moreno DM, Kanashiro C, Chaves MM, Sucupira MC, Diniz A, et al. Braz J Infect Dis 2004 8 6 399 406 15880230
-
(2004)
Braz J Infect Dis
, vol.8
, Issue.6
, pp. 399-406
-
-
Kallas, E.G.1
Bassichetto, K.C.2
Oliveira, S.M.3
Goldenberg, I.4
Bortoloto, R.5
Moreno, D.M.6
Kanashiro, C.7
Chaves, M.M.8
Sucupira, M.C.9
Diniz, A.10
-
26
-
-
0042626615
-
Performance characteristics of a new less sensitive HIV-1 enzyme immunoassay for use in estimating HIV seroincidence
-
DOI 10.1097/00126334-200308150-00012
-
Performance characteristics of a new less sensitive HIV-1 enzyme immunoassay for use in estimating HIV seroincidence. Kothe D, Byers RH, Caudill SP, Satten GA, Janssen RS, Hannon WH, Mei JV, J Acquir Immune Defic Syndr 2003 33 5 625 634 10.1097/00126334-200308150-00012 12902808 (Pubitemid 36975851)
-
(2003)
Journal of Acquired Immune Deficiency Syndromes
, vol.33
, Issue.5
, pp. 625-634
-
-
Kothe, D.1
Byers, R.H.2
Caudill, S.P.3
Satten, G.A.4
Janssen, R.S.5
Hannon, W.H.6
Mei, J.V.7
-
27
-
-
80054700479
-
Characterization of partial and near full-length genomes of HIV-1 strains sampled from recently infected individuals in Sao Paulo, Brazil
-
10.1371/journal.pone.0025869 22022460
-
Characterization of partial and near full-length genomes of HIV-1 strains sampled from recently infected individuals in Sao Paulo, Brazil. Sanabani SS, Pastena ER, da Costa AC, Martinez VP, Kleine-Neto W, de Oliveira AC, Sauer MM, Bassichetto KC, Oliveira SM, Tomiyama HT, et al. PLoS One 2011 6 10 25869 10.1371/journal.pone.0025869 22022460
-
(2011)
PLoS One
, vol.6
, Issue.10
, pp. 525869
-
-
Sanabani, S.S.1
Pastena, E.R.2
Da Costa, A.C.3
Martinez, V.P.4
Kleine-Neto, W.5
De Oliveira, A.C.6
Sauer, M.M.7
Bassichetto, K.C.8
Oliveira, S.M.9
Tomiyama, H.T.10
-
28
-
-
54549093554
-
Selective regimes and evolutionary rates of HIV-1 subtype B V3 variants in the Brazilian epidemic
-
10.1016/j.virol.2008.08.014 18809195
-
Selective regimes and evolutionary rates of HIV-1 subtype B V3 variants in the Brazilian epidemic. Diaz RS, Leal E, Sanabani S, Sucupira MC, Tanuri A, Sabino EC, Janini LM, Virology 2008 381 2 184 193 10.1016/j.virol.2008.08.014 18809195
-
(2008)
Virology
, vol.381
, Issue.2
, pp. 184-193
-
-
Diaz, R.S.1
Leal, E.2
Sanabani, S.3
Sucupira, M.C.4
Tanuri, A.5
Sabino, E.C.6
Janini, L.M.7
-
29
-
-
66149144807
-
High human herpesvirus 8 (HHV-8) prevalence, clinical correlates and high incidence among recently HIV-1-infected subjects in Sao Paulo
-
10.1371/journal.pone.0005613
-
High human herpesvirus 8 (HHV-8) prevalence, clinical correlates and high incidence among recently HIV-1-infected subjects in Sao Paulo. Batista MD, Ferreira S, Sauer MM, Tomiyama H, Giret MT, Pannuti CS, Diaz RS, Sabino EC, Kallas EG, Brazil. PLoS One 2009 4 5 5613 10.1371/journal.pone.0005613
-
(2009)
Brazil. PLoS One
, vol.4
, Issue.5
, pp. 55613
-
-
Batista, M.D.1
Ferreira, S.2
Sauer, M.M.3
Tomiyama, H.4
Giret, M.T.5
Pannuti, C.S.6
Diaz, R.S.7
Sabino, E.C.8
Kallas, E.G.9
-
30
-
-
0031574072
-
The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
DOI 10.1093/nar/25.24.4876
-
The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG, Nucleic Acids Res 1997 25 24 4876 4882 10.1093/nar/25.24.4876 9396791 (Pubitemid 28022245)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
31
-
-
0002051540
-
BioEdit: A user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT
-
BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Hall TA, Nucleic Acids SympSer 1999 41 95 98
-
(1999)
Nucleic Acids SympSer
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
32
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
10.1093/molbev/msr121 21546353
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S, Mol Biol Evol 2011 28 10 2731 2739 10.1093/molbev/msr121 21546353
-
(2011)
Mol Biol Evol
, vol.28
, Issue.10
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
33
-
-
33745256005
-
Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative
-
DOI 10.1080/10635150600755453, PII T8083888667361
-
Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative. Anisimova M, Gascuel O, Syst Biol 2006 55 4 539 552 10.1080/10635150600755453 16785212 (Pubitemid 43922340)
-
(2006)
Systematic Biology
, vol.55
, Issue.4
, pp. 539-552
-
-
Anisimova, M.1
Gascuel, O.2
-
34
-
-
33745657069
-
Analysis of the near full length genomes of HIV-1 subtypes B, F and BF recombinant from a cohort of 14 patients in São Paulo, Brazil
-
DOI 10.1016/j.meegid.2006.01.003, PII S1567134806000050
-
Analysis of the near full length genomes of HIV-1 subtypes B, F and BF recombinant from a cohort of 14 patients in Sao Paulo, Brazil. Sanabani S, Kleine Neto W, Kalmar EM, Diaz RS, Janini LM, Sabino EC, Infect Genet Evol 2006 6 5 368 377 10.1016/j.meegid.2006.01.003 16522378 (Pubitemid 43964479)
-
(2006)
Infection, Genetics and Evolution
, vol.6
, Issue.5
, pp. 368-377
-
-
Sanabani, S.1
Neto, W.K.2
Kalmar, E.M.N.3
Diaz, R.S.4
Janini, L.M.5
Sabino, E.C.6
-
35
-
-
67949120443
-
Near full-length genome analysis of low prevalent human immunodeficiency virus type 1 subclade F1 in Sao Paulo, Brazil
-
10.1186/1743-422X-6-78 19531216
-
Near full-length genome analysis of low prevalent human immunodeficiency virus type 1 subclade F1 in Sao Paulo, Brazil. Sanabani SS, Pastena ER, Kleine Neto W, Barreto CC, Ferrari KT, Kalmar EM, Ferreira S, Sabino EC, Virol J 2009 6 78 10.1186/1743-422X-6-78 19531216
-
(2009)
Virol J
, vol.6
, pp. 78
-
-
Sanabani, S.S.1
Pastena, E.R.2
Kleine Neto, W.3
Barreto, C.C.4
Ferrari, K.T.5
Kalmar, E.M.6
Ferreira, S.7
Sabino, E.C.8
-
36
-
-
78049524598
-
Whole-genome characterization of human and simian immunodeficiency virus intrahost diversity by ultradeep pyrosequencing
-
10.1128/JVI.01378-10 20844037
-
Whole-genome characterization of human and simian immunodeficiency virus intrahost diversity by ultradeep pyrosequencing. Bimber BN, Dudley DM, Lauck M, Becker EA, Chin EN, Lank SM, Grunenwald HL, Caruccio NC, Maffitt M, Wilson NA, et al. J Virol 2010 84 22 12087 12092 10.1128/JVI.01378-10 20844037
-
(2010)
J Virol
, vol.84
, Issue.22
, pp. 12087-12092
-
-
Bimber, B.N.1
Dudley, D.M.2
Lauck, M.3
Becker, E.A.4
Chin, E.N.5
Lank, S.M.6
Grunenwald, H.L.7
Caruccio, N.C.8
Maffitt, M.9
Wilson, N.A.10
-
37
-
-
77955400603
-
Unexpected diversity of cellular immune responses against Nef and Vif in HIV-1-infected patients who spontaneously control viral replication
-
10.1371/journal.pone.0011436 20625436
-
Unexpected diversity of cellular immune responses against Nef and Vif in HIV-1-infected patients who spontaneously control viral replication. Tarosso LF, Sauer MM, Sanabani S, Giret MT, Tomiyama HI, Sidney J, Piaskowski SM, Diaz RS, Sabino EC, Sette A, et al. PLoS One 2010 5 7 11436 10.1371/journal.pone.0011436 20625436
-
(2010)
PLoS One
, vol.5
, Issue.7
, pp. 511436
-
-
Tarosso, L.F.1
Sauer, M.M.2
Sanabani, S.3
Giret, M.T.4
Tomiyama, H.I.5
Sidney, J.6
Piaskowski, S.M.7
Diaz, R.S.8
Sabino, E.C.9
Sette, A.10
-
38
-
-
37349012862
-
Chronic HIV-1 infection frequently fails to protect against superinfection
-
DOI 10.1371/journal.ppat.0030177
-
Chronic HIV-1 infection frequently fails to protect against superinfection. Piantadosi A, Chohan B, Chohan V, McClelland RS, Overbaugh J, PLoS Pathog 2007 3 11 177 10.1371/journal.ppat.0030177 18020705 (Pubitemid 350291609)
-
(2007)
PLoS Pathogens
, vol.3
, Issue.11
, pp. 1745-1760
-
-
Piantadosi, A.1
Chohan, B.2
Chohan, V.3
McClelland, R.S.4
Overbaugh, J.5
-
39
-
-
0035913940
-
Diverse BF recombinants have spread widely since the introduction of hiv-1 into South America
-
DOI 10.1097/00002030-200110190-00002
-
Diverse BF recombinants have spread widely since the introduction of HIV-1 into South America. Carr JK, Avila M, Gomez Carrillo M, Salomon H, Hierholzer J, Watanaveeradej V, Pando MA, Negrete M, Russell KL, Sanchez J, et al. AIDS 2001 15 15 41 47 10.1097/00002030-200110190-00002 11600844 (Pubitemid 32980632)
-
(2001)
AIDS
, vol.15
, Issue.15
-
-
Carr, J.K.1
Avila, M.2
Carrillo, M.G.3
Salomon, H.4
Hierholzer, J.5
Watanaveeradej, V.6
Pando, M.A.7
Negrete, M.8
Russell, K.L.9
Sanchez, J.10
Birx, D.L.11
Andrade, R.12
Vinoles, J.13
McCutchan, F.E.14
-
40
-
-
73149117615
-
Dual HIV Infection Uncommon in Patients on Antiretroviral Therapy in a Region with High HIV Prevalence
-
10.1089/aid.2009.0095 20001312
-
Dual HIV Infection Uncommon in Patients on Antiretroviral Therapy in a Region with High HIV Prevalence. Naidoo AF, Parboosing R, Gordon ML, AIDS Res Hum Retroviruses 2009 25 12 1225 1230 10.1089/aid.2009.0095 20001312
-
(2009)
AIDS Res Hum Retroviruses
, vol.25
, Issue.12
, pp. 1225-1230
-
-
Naidoo, A.F.1
Parboosing, R.2
Gordon, M.L.3
-
41
-
-
33645959468
-
Dual HIV infection
-
16610118
-
Dual HIV infection. Cheonis N, BETA 2006 18 2 36 40 16610118
-
(2006)
BETA
, vol.18
, Issue.2
, pp. 36-40
-
-
Cheonis, N.1
-
42
-
-
33750085591
-
Lack of neutralizing antibody response to HIV-1 predisposes to superinfection
-
DOI 10.1016/j.virol.2006.08.009, PII S0042682206005538
-
Lack of neutralizing antibody response to HIV-1 predisposes to superinfection. Smith DM, Strain MC, Frost SD, Pillai SK, Wong JK, Wrin T, Liu Y, Petropolous CJ, Daar ES, Little SJ, et al. Virology 2006 355 1 1 5 10.1016/j.virol.2006.08.009 16962152 (Pubitemid 44585057)
-
(2006)
Virology
, vol.355
, Issue.1
, pp. 1-5
-
-
Smith, D.M.1
Strain, M.C.2
Frost, S.D.W.3
Pillai, S.K.4
Wong, J.K.5
Wrin, T.6
Liu, Y.7
Petropolous, C.J.8
Daar, E.S.9
Little, S.J.10
D. Richman, D.11
-
43
-
-
57349169315
-
Human immunodeficiency virus type 1 superinfection occurs despite relatively robust neutralizing antibody responses
-
10.1128/JVI.01730-08 18842728
-
Human immunodeficiency virus type 1 superinfection occurs despite relatively robust neutralizing antibody responses. Blish CA, Dogan OC, Derby NR, Nguyen MA, Chohan B, Richardson BA, Overbaugh J, J Virol 2008 82 24 12094 12103 10.1128/JVI.01730-08 18842728
-
(2008)
J Virol
, vol.82
, Issue.24
, pp. 12094-12103
-
-
Blish, C.A.1
Dogan, O.C.2
Derby, N.R.3
Nguyen, M.A.4
Chohan, B.5
Richardson, B.A.6
Overbaugh, J.7
-
44
-
-
20744454881
-
In-depth, longitudinal analysis of viral quasispecies from an individual triply infected with late-stage human immunodeficiency virus type 1, using a multiple PCR primer approach
-
DOI 10.1128/JVI.79.13.8249-8261.2005
-
In-depth, longitudinal analysis of viral quasispecies from an individual triply infected with late-stage human immunodeficiency virus type 1, using a multiple PCR primer approach. Gerhardt M, Mloka D, Tovanabutra S, Sanders-Buell E, Hoffmann O, Maboko L, Mmbando D, Birx DL, McCutchan FE, Hoelscher M, J Virol 2005 79 13 8249 8261 10.1128/JVI.79.13.8249-8261.2005 15956571 (Pubitemid 40853529)
-
(2005)
Journal of Virology
, vol.79
, Issue.13
, pp. 8249-8261
-
-
Gerhardt, M.1
Mloka, D.2
Tovanabutra, S.3
Sanders-Buell, E.4
Hoffmann, O.5
Maboko, L.6
Mmbando, D.7
Birx, D.L.8
McCutchan, F.E.9
Hoelscher, M.10
-
45
-
-
35348870970
-
HIV-1 sequence evolution in vivo after superinfection with three viral strains
-
DOI 10.1186/1742-4690-4-59
-
HIV-1 sequence evolution in vivo after superinfection with three viral strains. Kozaczynska K, Cornelissen M, Reiss P, Zorgdrager F, van der Kuyl AC, Retrovirology 2007 4 59 10.1186/1742-4690-4-59 17716368 (Pubitemid 47593395)
-
(2007)
Retrovirology
, vol.4
, pp. 59
-
-
Kozaczynska, K.1
Cornelissen, M.2
Reiss, P.3
Zorgdrager, F.4
Van Der Kuyl, A.C.5
-
46
-
-
33745436262
-
A dual superinfection and recombination within HIV-1 subtype B 12 years after primoinfection
-
DOI 10.1097/01.qai.0000214810.65292.73, PII 0012633420060500000002
-
A dual superinfection and recombination within HIV-1 subtype B 12 years after primoinfection. Pernas M, Casado C, Fuentes R, Perez-Elias MJ, Lopez-Galindez C, J Acquir Immune Defic Syndr 2006 42 1 12 18 10.1097/01.qai.0000214810.65292.73 16763489 (Pubitemid 43947941)
-
(2006)
Journal of Acquired Immune Deficiency Syndromes
, vol.42
, Issue.1
, pp. 12-18
-
-
Pernas, M.1
Casado, C.2
Fuentes, R.3
Perez-Elias, M.J.4
Lopez-Galindez, C.5
-
47
-
-
0032565724
-
Various types of HIV mixed infections in Cameroon
-
DOI 10.1006/viro.1998.9141
-
Various types of HIV mixed infections in Cameroon. Takehisa J, Zekeng L, Ido E, Mboudjeka I, Moriyama H, Miura T, Yamashita M, Gurtler LG, Hayami M, Kaptue L, Virology 1998 245 1 1 10 10.1006/viro.1998.9141 9614862 (Pubitemid 28384072)
-
(1998)
Virology
, vol.245
, Issue.1
, pp. 1-10
-
-
Takehisa, J.1
Zekeng, L.2
Ido, E.3
Mboudjeka, I.4
Moriyama, H.5
Miura, T.6
Yamashita, M.7
Gurtler, L.G.8
Hayami, M.9
Kaptue, L.10
-
48
-
-
79551689590
-
Multiple HIV-1 infections with evidence of recombination in heterosexual partnerships in a low risk Rural Clinical Cohort in Uganda
-
10.1016/j.virol.2010.12.025 21239033
-
Multiple HIV-1 infections with evidence of recombination in heterosexual partnerships in a low risk Rural Clinical Cohort in Uganda. Ssemwanga D, Lyagoba F, Ndembi N, Mayanja BN, Larke N, Wang S, Baalwa J, Williamson C, Grosskurth H, Kaleebu P, Virology 2011 411 1 113 131 10.1016/j.virol.2010.12.025 21239033
-
(2011)
Virology
, vol.411
, Issue.1
, pp. 113-131
-
-
Ssemwanga, D.1
Lyagoba, F.2
Ndembi, N.3
Mayanja, B.N.4
Larke, N.5
Wang, S.6
Baalwa, J.7
Williamson, C.8
Grosskurth, H.9
Kaleebu, P.10
-
49
-
-
67649669727
-
Multiple-infection and recombination in HIV-1 within a longitudinal cohort of women
-
10.1186/1742-4690-6-54 19493346
-
Multiple-infection and recombination in HIV-1 within a longitudinal cohort of women. Templeton AR, Kramer MG, Jarvis J, Kowalski J, Gange S, Schneider MF, Shao Q, Zhang GW, Yeh MF, Tsai HL, et al. Retrovirology 2009 6 54 10.1186/1742-4690-6-54 19493346
-
(2009)
Retrovirology
, vol.6
, pp. 54
-
-
Templeton, A.R.1
Kramer, M.G.2
Jarvis, J.3
Kowalski, J.4
Gange, S.5
Schneider, M.F.6
Shao, Q.7
Zhang, G.W.8
Yeh, M.F.9
Tsai, H.L.10
-
50
-
-
33745951838
-
Frequency of HIV type 1 dual infection and HIV diversity: Analysis of low- and high-risk populations in Mbeya Region, Tanzania
-
DOI 10.1089/aid.2006.22.599
-
Frequency of HIV type 1 dual infection and HIV diversity: analysis of low- and high-risk populations in Mbeya Region, Tanzania. Herbinger KH, Gerhardt M, Piyasirisilp S, Mloka D, Arroyo MA, Hoffmann O, Maboko L, Birx DL, Mmbando D, McCutchan FE, et al. AIDS Res Hum Retroviruses 2006 22 7 599 606 10.1089/aid.2006.22.599 16831083 (Pubitemid 44061395)
-
(2006)
AIDS Research and Human Retroviruses
, vol.22
, Issue.7
, pp. 599-606
-
-
Herbinger, K.-H.1
Gerhardt, M.2
Piyasirisilp, S.3
Mloka, D.4
Arroyo, M.A.5
Hoffmann, O.6
Maboko, L.7
Birx, D.L.8
Mmbando, D.9
McCutchan, F.E.10
Hoelscher, M.11
-
51
-
-
3142680739
-
HIV-1 co/super-infection in intravenous drug users
-
DOI 10.1097/01.aids.0000131330.28762.0c
-
HIV-1 co/super-infection in intravenous drug users. Yerly S, Jost S, Monnat M, Telenti A, Cavassini M, Chave JP, Kaiser L, Burgisser P, Perrin L, AIDS 2004 18 10 1413 1421 10.1097/01.aids.0000131330.28762.0c 15199317 (Pubitemid 38925133)
-
(2004)
AIDS
, vol.18
, Issue.10
, pp. 1413-1421
-
-
Yerly, S.1
Jost, S.2
Monnat, M.3
Telenti, A.4
Cavassini, M.5
Chave, J.-P.6
Kaiser, L.7
Burgisser, P.8
Perrin, L.9
-
52
-
-
4644300726
-
Incidence of HIV-1 dual infection and its association with increased viral load set point in a cohort of HIV-1 subtype C-infected female sex workers
-
DOI 10.1086/423940
-
Incidence of HIV-1 dual infection and its association with increased viral load set point in a cohort of HIV-1 subtype C-infected female sex workers. Grobler J, Gray CM, Rademeyer C, Seoighe C, Ramjee G, Karim SA, Morris L, Williamson C, J Infect Dis 2004 190 7 1355 1359 10.1086/423940 15346349 (Pubitemid 39287764)
-
(2004)
Journal of Infectious Diseases
, vol.190
, Issue.7
, pp. 1355-1359
-
-
Grobler, J.1
Gray, C.M.2
Rademeyer, C.3
Seoighe, C.4
Ramjee, G.5
Karim, S.A.6
Morris, L.7
Williamson, C.8
-
53
-
-
84862857091
-
The Rates of HIV Superinfection and Primary HIV Incidence in a General Population in Rakai, Uganda
-
10.1093/infdis/jis325 22675216
-
The Rates of HIV Superinfection and Primary HIV Incidence in a General Population in Rakai, Uganda. Redd AD, Mullis CE, Serwadda D, Kong X, Martens C, Ricklefs SM, Tobian AA, Xiao C, Grabowski MK, Nalugoda F, et al. J Infect Dis 2012 206 2 267 274 10.1093/infdis/jis325 22675216
-
(2012)
J Infect Dis
, vol.206
, Issue.2
, pp. 267-274
-
-
Redd, A.D.1
Mullis, C.E.2
Serwadda, D.3
Kong, X.4
Martens, C.5
Ricklefs, S.M.6
Tobian, A.A.7
Xiao, C.8
Grabowski, M.K.9
Nalugoda, F.10
-
54
-
-
84856733514
-
HIV-1 dual infection is associated with faster CD4+ T-cell decline in a cohort of men with primary HIV infection
-
10.1093/cid/cir849 22157174
-
HIV-1 dual infection is associated with faster CD4+ T-cell decline in a cohort of men with primary HIV infection. Cornelissen M, Pasternak AO, Grijsen ML, Zorgdrager F, Bakker M, Blom P, Prins JM, Jurriaans S, van der Kuyl AC, Clin Infect Dis 2012 54 4 539 547 10.1093/cid/cir849 22157174
-
(2012)
Clin Infect Dis
, vol.54
, Issue.4
, pp. 539-547
-
-
Cornelissen, M.1
Pasternak, A.O.2
Grijsen, M.L.3
Zorgdrager, F.4
Bakker, M.5
Blom, P.6
Prins, J.M.7
Jurriaans, S.8
Van Der Kuyl, A.C.9
|