High performance phosphorylation site assignment algorithm for mass spectrometry data using multicore systems

2012 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2012

Volumn , Issue , 2012, Pages 667-672

  Saeed, Fahad ^a   Pisitkun, Trairak ^a   Hoffert, Jason ^a   Knepper, Mark ^a  

^a NATIONAL HEART LUNG AND BLOOD INSTITUTE   (United States)

Author keywords

Algorithms; Design; Performance

Indexed keywords

ASSIGNMENT ALGORITHMS; DATA SETS; DOMAIN DECOMPOSITIONS; HIGH THROUGHPUT; JAVA THREAD; LABELING STRATEGY; LC-MS/MS; MASS SPECTROMETRY DATA; MULTI-CORE SYSTEMS; NUMBER OF THREADS; PARALLELIZED ALGORITHM; PARALLELIZED VERSION; PERFORMANCE; PHOSPHOPROTEOMICS; PHOSPHORYLATION SITES; TANDEM MASS SPECTROMETRY;

ALGORITHMS; DESIGN; DOMAIN DECOMPOSITION METHODS; MASS SPECTROMETRY; PEPTIDES; PHOSPHORYLATION;

BIOINFORMATICS;

EID: 84869406762     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/2382936.2383056     Document Type: Conference Paper

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