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Volumn 80, Issue 6, 2012, Pages 509-522

Using HLA loci to inform ancestry and health in Polynesian and Maori populations

Author keywords

Admixture; Ancestry and human health; Human Leukocyte Antigens; Maori; Polynesia; Polynesians

Indexed keywords

HLA A ANTIGEN; HLA ANTIGEN CLASS 1; HLA ANTIGEN CLASS 2; HLA B ANTIGEN; HLA C ANTIGEN; HLA DQA1 ANTIGEN; HLA DQB1 ANTIGEN; HLA DRB1 ANTIGEN;

EID: 84869043088     PISSN: 00012815     EISSN: 13990039     Source Type: Journal    
DOI: 10.1111/tan.12026     Document Type: Article
Times cited : (14)

References (41)
  • 1
    • 82955230938 scopus 로고    scopus 로고
    • Are "cultures" inherited? Multidisciplinary perspectives on the origins of Austronesian-speaking peoples prior to 1000 BC
    • Roberts BW, Linden MV, eds. Dordrecht: Springer
    • Bellwood P, Chambers GK, Ross M, Hung C-H. Are "cultures" inherited? Multidisciplinary perspectives on the origins of Austronesian-speaking peoples prior to 1000 BC. Roberts BW, Linden MV, eds. Investigating Archaeological Cultures: Material Culture, Variability and Transmission. Dordrecht: Springer, 2011, 321-54.
    • (2011) Investigating Archaeological Cultures: Material Culture, Variability and Transmission , pp. 321-354
    • Bellwood, P.1    Chambers, G.K.2    Ross, M.3    Hung, C.-H.4
  • 2
    • 84869003078 scopus 로고    scopus 로고
    • Polynesian genetics and Austronesian prehistory
    • Simanjuntak T, Pojoh I, Hisyam M, eds. Jakarta: Indonesian Institute of Sciences (LIPI)
    • Chambers GK. Polynesian genetics and Austronesian prehistory. Simanjuntak T, Pojoh I, Hisyam M, eds. Austronesian Diaspora and the Ethnogeneses of People in Indonesian Archipelago. Jakarta: Indonesian Institute of Sciences (LIPI), 2006, 299-319.
    • (2006) Austronesian Diaspora and the Ethnogeneses of People in Indonesian Archipelago , pp. 299-319
    • Chambers, G.K.1
  • 3
    • 84869007010 scopus 로고    scopus 로고
    • HLA polymorphism in Pacific Islands populations. PhD Thesis. University of Otago, Dunedin, New Zealand
    • Velickovic ZM. HLA polymorphism in Pacific Islands populations. PhD Thesis. University of Otago, Dunedin, New Zealand, 2001.
    • (2001)
    • Velickovic, Z.M.1
  • 4
    • 0036024566 scopus 로고    scopus 로고
    • HLA-DRB1 and DQB1 polymorphisms in Pacific Islands populations
    • Velickovic ZM, Delahunt B, Carter JM. HLA-DRB1 and DQB1 polymorphisms in Pacific Islands populations. Tissue Antigens 2002: 59: 397-406.
    • (2002) Tissue Antigens , vol.59 , pp. 397-406
    • Velickovic, Z.M.1    Delahunt, B.2    Carter, J.M.3
  • 5
    • 84870498416 scopus 로고    scopus 로고
    • HLA allelic variation in New Zealand Maori. PhD Thesis. University of Otago, Dunedin, New Zealand, 2007.
    • Tracey MC. HLA allelic variation in New Zealand Maori. PhD Thesis. University of Otago, Dunedin, New Zealand, 2007.
    • Tracey, M.C.1
  • 6
    • 33749614921 scopus 로고    scopus 로고
    • Class II HLA allele polymorphism: DRB1, DQB1 and DPB1 alleles and haplotypes in the New Zealand Maori population
    • Tracey MC, Carter JM. Class II HLA allele polymorphism: DRB1, DQB1 and DPB1 alleles and haplotypes in the New Zealand Maori population. Tissue Antigens 2006: 68: 297-302.
    • (2006) Tissue Antigens , vol.68 , pp. 297-302
    • Tracey, M.C.1    Carter, J.M.2
  • 7
    • 78651292217 scopus 로고    scopus 로고
    • Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations
    • Gonzalez-Galarza FF, Christmas S, Middleton D, Jones AR. Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations. Nucl Acids Res 2011: 39: D913-9.
    • (2011) Nucl Acids Res , vol.39
    • Gonzalez-Galarza, F.F.1    Christmas, S.2    Middleton, D.3    Jones, A.R.4
  • 8
    • 0036797034 scopus 로고    scopus 로고
    • Juvenile idiopathic arthritis classified by the ILAR criteria: HLA associations in UK patients
    • Thomson W, Barrett JH, Donn R et al. Juvenile idiopathic arthritis classified by the ILAR criteria: HLA associations in UK patients. Rheumatology 2002: 41: 1183-9.
    • (2002) Rheumatology , vol.41 , pp. 1183-1189
    • Thomson, W.1    Barrett, J.H.2    Donn, R.3
  • 9
    • 0034797253 scopus 로고    scopus 로고
    • Diversity of HLA among Taiwan's indigenous tribes and the Ivatans in the Philippines
    • Chu CC, Lin M, Nakajima F et al. Diversity of HLA among Taiwan's indigenous tribes and the Ivatans in the Philippines. Tissue Antigens 2001: 58: 9-18.
    • (2001) Tissue Antigens , vol.58 , pp. 9-18
    • Chu, C.C.1    Lin, M.2    Nakajima, F.3
  • 10
    • 0032714642 scopus 로고    scopus 로고
    • HLA class I allele distribution in six Pacific/Asian populations: evidence of selection at the HLA-A locus
    • Bugawan TL, Mack SJ, Stoneking M, Saha M, Beck HP, Erlich HA. HLA class I allele distribution in six Pacific/Asian populations: evidence of selection at the HLA-A locus. Tissue Antigens 1999: 53: 311-9.
    • (1999) Tissue Antigens , vol.53 , pp. 311-319
    • Bugawan, T.L.1    Mack, S.J.2    Stoneking, M.3    Saha, M.4    Beck, H.P.5    Erlich, H.A.6
  • 11
    • 0034948213 scopus 로고    scopus 로고
    • The peopling of New Guinea: Evidence from class I human leukocyte antigen
    • Main P, Attenborough RD, Chelvanayagam G, Gao X. The peopling of New Guinea: Evidence from class I human leukocyte antigen. Hum Biol 2001: 73: 365-83.
    • (2001) Hum Biol , vol.73 , pp. 365-383
    • Main, P.1    Attenborough, R.D.2    Chelvanayagam, G.3    Gao, X.4
  • 12
    • 0023940183 scopus 로고
    • Antigen and haplotype frequencies at three human leukocyte antigen (HLA-A, -B and -C) in the Pawaia of Papua New Guinea
    • Bhatia K, Prasad ML, Barnish G, Koki G. Antigen and haplotype frequencies at three human leukocyte antigen (HLA-A, -B and -C) in the Pawaia of Papua New Guinea. Am J Phys Anthropol 1988: 75: 329-40.
    • (1988) Am J Phys Anthropol , vol.75 , pp. 329-340
    • Bhatia, K.1    Prasad, M.L.2    Barnish, G.3    Koki, G.4
  • 13
    • 0020308661 scopus 로고
    • The Colonization of the Pacific: the story according to human leukocyte antigens
    • Serjeantson SW, Ryan DP, Thompson AR. The Colonization of the Pacific: the story according to human leukocyte antigens. Am J Hum Genet 1982: 34: 904-18.
    • (1982) Am J Hum Genet , vol.34 , pp. 904-918
    • Serjeantson, S.W.1    Ryan, D.P.2    Thompson, A.R.3
  • 15
    • 0033956995 scopus 로고    scopus 로고
    • Heterogeneity of Taiwan's indigenous population: Possible relation to prehistoric Mongoloid dispersals
    • Lin M, Chu CC, Lee HL et al. Heterogeneity of Taiwan's indigenous population: Possible relation to prehistoric Mongoloid dispersals. Tissue Antigens 2000: 55: 1-9.
    • (2000) Tissue Antigens , vol.55 , pp. 1-9
    • Lin, M.1    Chu, C.C.2    Lee, H.L.3
  • 16
    • 0026634881 scopus 로고
    • HLA-DR, DQ nucleotide sequence polymorphisms in five Melanesian populations
    • Gao X, Bhatia K, Trent RJ, Serjeantson SW. HLA-DR, DQ nucleotide sequence polymorphisms in five Melanesian populations. Tissue Antigens 1992: 40: 31-7.
    • (1992) Tissue Antigens , vol.40 , pp. 31-37
    • Gao, X.1    Bhatia, K.2    Trent, R.J.3    Serjeantson, S.W.4
  • 17
    • 0026701985 scopus 로고
    • HLA class II diversity in Australian aborigines: unusual HLA-DRB1 alleles
    • Gao X, Veale A, Serjeantson SW. HLA class II diversity in Australian aborigines: unusual HLA-DRB1 alleles. Immunogenetics 1992: 36: 333-7.
    • (1992) Immunogenetics , vol.36 , pp. 333-337
    • Gao, X.1    Veale, A.2    Serjeantson, S.W.3
  • 18
    • 0026795449 scopus 로고
    • HLA-DR, DQ sequence polymorphisms in Polynesians, Micronesians, and Javanese
    • Gao X, Zimmet P, Serjeantson SW. HLA-DR, DQ sequence polymorphisms in Polynesians, Micronesians, and Javanese. Hum Immunol 1992: 34: 153-61.
    • (1992) Hum Immunol , vol.34 , pp. 153-161
    • Gao, X.1    Zimmet, P.2    Serjeantson, S.W.3
  • 19
    • 0026008830 scopus 로고
    • Heterogeneity in HLA-DR2-related DR, DR haplotypes in eight populations of Asia-Oceania
    • Gao X, Serjeantson SW. Heterogeneity in HLA-DR2-related DR, DR haplotypes in eight populations of Asia-Oceania. Immunogenetics 1991: 34: 401-8.
    • (1991) Immunogenetics , vol.34 , pp. 401-408
    • Gao, X.1    Serjeantson, S.W.2
  • 20
    • 0030741367 scopus 로고    scopus 로고
    • Molecular analysis of HLA polymorphism in Khoton-Mongolians
    • Munkhbat B, Sato T, Hagihara M et al. Molecular analysis of HLA polymorphism in Khoton-Mongolians. Tissue Antigens 1997: 50: 124-34.
    • (1997) Tissue Antigens , vol.50 , pp. 124-134
    • Munkhbat, B.1    Sato, T.2    Hagihara, M.3
  • 22
    • 0032966791 scopus 로고    scopus 로고
    • Distribution of HLA gene and haplotype frequencies in Taiwan: a comparative study among Min-nan, Hakka, Aborigines and Mainland Chinese
    • Shaw C-K, Chen L-L, Lee A, Lee TD. Distribution of HLA gene and haplotype frequencies in Taiwan: a comparative study among Min-nan, Hakka, Aborigines and Mainland Chinese. Tissue Antigens 1999: 53: 51-64.
    • (1999) Tissue Antigens , vol.53 , pp. 51-64
    • Shaw, C.-K.1    Chen, L.-L.2    Lee, A.3    Lee, T.D.4
  • 23
    • 10344261523 scopus 로고    scopus 로고
    • HLA class-I and class-II allele frequencies and two-locus haplotypes in Melanesians of Vanuatu and New Caledonia
    • Maitland K, Bunce M, Harding RM et al. HLA class-I and class-II allele frequencies and two-locus haplotypes in Melanesians of Vanuatu and New Caledonia. Tissue Antigens 2004: 64: 678-86.
    • (2004) Tissue Antigens , vol.64 , pp. 678-686
    • Maitland, K.1    Bunce, M.2    Harding, R.M.3
  • 24
    • 33845724797 scopus 로고    scopus 로고
    • HLA-DRB1 polymorphism on Ha'ano island of the Kingdom of Tonga
    • Ohashi J, Naka I, Kimura R et al. HLA-DRB1 polymorphism on Ha'ano island of the Kingdom of Tonga. Anthropol Sci 2006: 114: 193-8.
    • (2006) Anthropol Sci , vol.114 , pp. 193-198
    • Ohashi, J.1    Naka, I.2    Kimura, R.3
  • 25
    • 0034122393 scopus 로고    scopus 로고
    • Evolution of Pacific/Asian populations inferred from HLA class II allele frequency distributions
    • Mack SJ, Bugawan TL, Moonsamy PV et al. Evolution of Pacific/Asian populations inferred from HLA class II allele frequency distributions. Tissue Antigens 2000: 55: 383-400.
    • (2000) Tissue Antigens , vol.55 , pp. 383-400
    • Mack, S.J.1    Bugawan, T.L.2    Moonsamy, P.V.3
  • 26
    • 0034519493 scopus 로고    scopus 로고
    • Allele frequencies and haplotypic associations defined by allelic DNA typing at HLA class I and class II loci in the Japanese population
    • Saito S, Ota S, Yamada E, Inoko H, Ota M. Allele frequencies and haplotypic associations defined by allelic DNA typing at HLA class I and class II loci in the Japanese population. Tissue Antigens 2000: 56: 522-9.
    • (2000) Tissue Antigens , vol.56 , pp. 522-529
    • Saito, S.1    Ota, S.2    Yamada, E.3    Inoko, H.4    Ota, M.5
  • 27
    • 77956313865 scopus 로고    scopus 로고
    • Anthropological analysis of Koreans using HLA class II diversity among East Asians
    • Yang JH, Sohn Y-H, Ko S-Y, Choi S-E, Kim MH, Oh H-B. Anthropological analysis of Koreans using HLA class II diversity among East Asians. Tissue Antigens 2010: 76: 282-8.
    • (2010) Tissue Antigens , vol.76 , pp. 282-288
    • Yang, J.H.1    Sohn, Y.-H.2    Ko, S.-Y.3    Choi, S.-E.4    Kim, M.H.5    Oh, H.-B.6
  • 28
    • 0028904720 scopus 로고
    • HLA-DRB1 frequencies of non-Austronesian-speaking Gidra in South New Guinea and their genetic affinities with Oceanian populations
    • Yoshida M, Ohtsuka R, Nakazawa M, Juji T, Tokunaga K. HLA-DRB1 frequencies of non-Austronesian-speaking Gidra in South New Guinea and their genetic affinities with Oceanian populations. AJPA 1995: 96: 177-81.
    • (1995) AJPA , vol.96 , pp. 177-181
    • Yoshida, M.1    Ohtsuka, R.2    Nakazawa, M.3    Juji, T.4    Tokunaga, K.5
  • 29
    • 0032800066 scopus 로고    scopus 로고
    • Towards understanding the origin and dispersal of Austronesians in the Solomon Sea: HLA class II polymorphism in eight distinct populations of Asia-Oceania
    • Zimdahl H, Schiefenhovel W, Kayser M, Roewer L, Nagy M. Towards understanding the origin and dispersal of Austronesians in the Solomon Sea: HLA class II polymorphism in eight distinct populations of Asia-Oceania. Eur J Immunogenet 1999: 26: 405-16.
    • (1999) Eur J Immunogenet , vol.26 , pp. 405-416
    • Zimdahl, H.1    Schiefenhovel, W.2    Kayser, M.3    Roewer, L.4    Nagy, M.5
  • 30
    • 0033613658 scopus 로고    scopus 로고
    • Molecular genetic evidence for the human settlement of the Pacific: analysis of mitochondrial DNA, Y chromosome and HLA markers
    • Hagelberg E, Kayser M, Nagy M et al. Molecular genetic evidence for the human settlement of the Pacific: analysis of mitochondrial DNA, Y chromosome and HLA markers. Philos Trans R Soc Lond B Biol Sci 1999: 354: 141-52.
    • (1999) Philos Trans R Soc Lond B Biol Sci , vol.354 , pp. 141-152
    • Hagelberg, E.1    Kayser, M.2    Nagy, M.3
  • 31
    • 47649106458 scopus 로고    scopus 로고
    • Gene flow and natural selection in oceanic human populations inferred from genome-wide SNP typing
    • Kimura R, Ohashi J, Matsumura Y et al. Gene flow and natural selection in oceanic human populations inferred from genome-wide SNP typing. Mol Biol Evol 2008: 25: 1750-61.
    • (2008) Mol Biol Evol , vol.25 , pp. 1750-1761
    • Kimura, R.1    Ohashi, J.2    Matsumura, Y.3
  • 32
    • 78649323237 scopus 로고    scopus 로고
    • Demographic history of Oceania inferred from genome-wide data
    • Wollstein A, Lao O, Becker C et al. Demographic history of Oceania inferred from genome-wide data. Curr Biol 2010: 20: 1983-92.
    • (2010) Curr Biol , vol.20 , pp. 1983-1992
    • Wollstein, A.1    Lao, O.2    Becker, C.3
  • 33
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin version 3.0: an integrated software package for population genetics data analysis
    • Excoffier L, Laval G, Schneider S. Arlequin version 3.0: an integrated software package for population genetics data analysis. Evol Bioinform Online 2005: 1: 47-50.
    • (2005) Evol Bioinform Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 35
    • 8544252495 scopus 로고    scopus 로고
    • Effect of two- and three-locus linkage disequilibrium on the power to detect marker/phenotype associations
    • Nielson DM, Ehm MG, Zaykin DV, Weir BS. Effect of two- and three-locus linkage disequilibrium on the power to detect marker/phenotype associations. Genetics 2004: 168: 1029-40.
    • (2004) Genetics , vol.168 , pp. 1029-1040
    • Nielson, D.M.1    Ehm, M.G.2    Zaykin, D.V.3    Weir, B.S.4
  • 37
    • 0030203863 scopus 로고    scopus 로고
    • TreeView: an application to display phylogenetic trees on personal computers
    • Page RDM. TreeView: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 1996: 12: 357-8.
    • (1996) Comput Appl Biosci , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 38
    • 0035074615 scopus 로고    scopus 로고
    • Maori origins, Y-chromosome haplotypes and implications for human history in the Pacific
    • Underhill PA, Passarino G, Lin AA et al. Maori origins, Y-chromosome haplotypes and implications for human history in the Pacific. Hum Mutat 2001: 17: 271-80.
    • (2001) Hum Mutat , vol.17 , pp. 271-280
    • Underhill, P.A.1    Passarino, G.2    Lin, A.A.3
  • 40
    • 51749101703 scopus 로고    scopus 로고
    • Balancing selection and heterogeneity across the classical human leukocyte antigen loci: A meta-analytic review of 497 population studies
    • Solberg OD, Mack SJ, Lancaster AK et al. Balancing selection and heterogeneity across the classical human leukocyte antigen loci: A meta-analytic review of 497 population studies. Hum Immunol 2008: 69: 443-64.
    • (2008) Hum Immunol , vol.69 , pp. 443-464
    • Solberg, O.D.1    Mack, S.J.2    Lancaster, A.K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.