A role for root morphology and related candidate genes in P acquisition efficiency in maize

Functional Plant Biology

Volumn 39, Issue 11, 2012, Pages 925-935

  Morais De Sousa, Sylvia ^a   Clark, Randy T ^b   Mendes, Flávia Ferreira ^a,c   Carlos De Oliveira, Antonio ^a   Vilaça De Vasconcelos, Maria Joś ^a   Parentoni, Sidney Netto ^a   Kochian, Leon V ^b   Guimarães, Cláudia Teixeira ^a   Magalhães, Jurandir Vieira ^a  

^a EMBRAPA MILHO E SORGO   (Brazil)

^b Department of Obstetrics Gynecology   (United States)

^c FEDERAL UNIVERSITY OF LAVRAS   (Brazil)

Author keywords

gene expression; phosphate deficiency; phosphorus nutrition; plant stresses; root morphology; Zea mays

Indexed keywords

GENE EXPRESSION; GROWTH RATE; MAIZE; MOLECULAR ANALYSIS; MORPHOLOGY; PHOSPHATE; PHOSPHORUS; PHYSIOLOGICAL RESPONSE; PRINCIPAL COMPONENT ANALYSIS; ROOT; SOIL NUTRIENT; TROPICAL SOIL;

ZEA MAYS;

EID: 84868711170     PISSN: 14454408     EISSN: None     Source Type: Journal    
DOI: 10.1071/FP12022     Document Type: Article

References (59)

1. Amtmann A, Hammond JP, Armengaud P, White PJ (2005) Nutrient sensing and signalinginplants: potassium and phosphorus.Advances inBotanical Research 43, 209-257. doi: 10.1016/S0065-2296(05)43005-0 (Pubitemid 43478151)
2. Baligar VC, Fageria NK (1997) Nutrient use efficiency in acid soils: nutrient management and plant use efficiency. In 'Plant-soil interactions at low pH: sustainable agriculture and forestry production'. (Eds A. C. Moniz, A. M. C. Furlani, R. E. Schaffertm, C. A. Rosolem and H. Canatarella.) pp. 75-97. (Brazilian Soil Science Society: Brazil)
3. Bates TR, Lynch JP (1996) Stimulationof root hair elongation in Arabidopsis thaliana by low phosphorus availability. Plant, Cell & Environment 19, 529-538. (Pubitemid 126584440)
4. Bates TR, Lynch JP (2000a) Plant growth and phosphorus accumulation of wild type and two root hair mutants of Arabidopsis thaliana (Brassicaceae). American Journal of Botany 87, 958-963. doi: 10.2307/2656994 (Pubitemid 30466776)
5. Bates TR, Lynch JP (2000b) The efficiency of Arabidopsis thaliana (Brassicaceae) root hairs in phosphorus acquisition. American Journal of Botany 87, 964-970. doi: 10.2307/2656995 (Pubitemid 30466777)
6. Bates TR, Lynch JP (2001) Root hairs confer a competitive advantage under low phosphorus availability. Plant and Soil 236, 243-250. doi: 10.1023/A: 1012791706800 (Pubitemid 34020968)
7. Bazinger M, Betran FJ, Lafitte HR (1997) Efficiency of high nitrogen selection environments for improving maize for low nitrogen target environments. Crop Science 37, 921-950.
8. Bonser AM, Lynch J, Snapp S (1996) Effect of phosphorus deficiency on growth angle of basal roots in Phaseolus vulgaris. New Phytologist 132, 281-288. doi: 10.1111/j.1469-8137.1996.tb01847.x
9. Brady SM, Song S, Dhugga KS, Rafalski A, Benfey PN (2007) Combining expression and comparative evolutionary analysis. The COBRA gene family. Plant Physiology 143, 172-187. doi: 10.1104/pp.106.087262 (Pubitemid 46133627)
10. Cahn MD, Zobel RW, Bouldin DR (1989) Relationship between root elongation rate and diameter and duration of growth of lateral roots of maize. Plant and Soil 119, 271-279. doi: 10.1007/BF02370419
11. Famoso AN, Clark RT, Shaff JE, Craft E, McCouch SR, Kochian LV (2010) Development of a novel aluminum tolerance phenotyping platform used for comparisons of cereal aluminum tolerance and investigations into rice aluminum tolerance mechanisms. Plant Physiology 153, 1678-1691. doi: 10.1104/pp.110. 156794
12. Foy CD, Fleming AL, Burns GP, Arminger WH (1967) Characterization of differential aluminum tolerance among varieties of wheat and barley. Proceedings-Soil Science Society of America 31, 513-521. doi: 10.2136/sssaj1967.03615995003100040027x
13. Gahoonia TS, Nielsen NE, Joshi PA, Jahoor A (2001) A roothairless barley mutant for elucidating genetic of root hairs and phosphorus uptake. Plant and Soil 235, 211-219. doi: 10.1023/A: 1011993322286 (Pubitemid 32996847)
14. Ge ZY, Rubio G, Lynch JP (2000) The importance of root gravitropism for inter-root competition and phosphorus acquisition efficiency: results from a geometric simulation model.Plant and Soil218, 159-171. doi: 10.1023/A: 1014987710937 (Pubitemid 30144145)
15. Genis A, Blumberg DG, Ben-Asher J (2006) Optimizing application of image analysis tools to determine physical characteristics of fine roots. Environment Control in Biology 44, 11-20. doi: 10.2525/ecb.44.11
16. Gill MA, Salim RM, Zia MS (1992) Maize growth and uptake of phosphate and copper at different ambient phosphate concentrations. Soil Science andPlant Nutrition38, 631-636. doi: 10.1080/00380768.1992.10416692
17. 4 species. Journal of Experimental Botany 47, 497-505. doi: 10.1093/jxb/47.4.497 (Pubitemid 126578595)
18. Helariutta Y, Fukaki H, Wysocka-Diller J, Nakajima K, Jung J, Sena G, Hauser MT, Benfey PN (2000) The SHORT-ROOT gene controls radial patterning of the Arabidopsis root through radial signaling. Cell 101, 555-567. doi: 10.1016/S0092-8674(00)80865-X
19. Hochholdinger F, Tuberosa R (2009) Genetic and genomic dissection of maize root development and architecture. Current Opinion in Plant Biology 12, 1-6.
20. Hochholdinger F, Zimmermann R (2008) Conserved and diversemechanisms in root development. Current Opinion in Plant Biology 11, 70-74. doi: 10.1016/j.pbi.2007.10.002 (Pubitemid 351172872)
21. Hochholdinger F, Woll K, Sauer M, Dembinsky D (2004a) Genetic dissection of root formation in maize (Zea mays) reveals root-type specific development programmes. Annals of Botany 93, 359-368. doi: 10.1093/aob/mch056 (Pubitemid 41301682)
22. Hochholdinger F, Park WJ, Sauer M, Woll K (2004b) From weeds to crops: genetic analysis of root development in cereals. Trends in Plant Science 9, 42-48. doi: 10.1016/j.tplants.2003.11.003 (Pubitemid 38157645)
23. Hochholdinger F, Wen TJ, Zimmermann R, Chimot-Marolle P, da Costa e Silva O, Bruce W, Lamkey KR, Wienand U, Schnable PS (2008) The maize (Zea maysL.) roothairless3gene encodesaputative GPI-anchored, monocot-specific, COBRA-like protein that significantly affects grain yield. The Plant Journal 54, 888-898. doi: 10.1111/j.1365-313X.2008.03459.x (Pubitemid 351744782)
24. Hodge A (2009) Root decisions. Plant, Cell and Environment 32, 628-640. doi: 10.1111/j.1365-3040.2008.01891.x
25. Hotelling H (1936) Relations between two sets of variables. Biometrika 28, 321-377.
26. Hund A, Trachsel S, Stamp P (2009) Growth of axile and lateral rootsofmaize: I development of a phenotyping platform. Plant and Soil 325, 335-349. doi: 10.1007/s11104-009-9984-2
27. Liao H, Rubio G, Yan XL, Cao AQ, Brown KM, Lynch JP (2001) Effect of phosphorus availability on basal root shallownessin common bean.Plant and Soil 232, 69-79. doi: 10.1023/A: 1010381919003 (Pubitemid 32643824)
28. Lim J, Helariutta Y, Specht CD, Jung J, Sims L, Bruce WB, Diehn S, Benfey PN (2000) Molecularanalysisofthe SCARECROW geneinmaize reveals a common basis for radial patterning in diverse meristems. The Plant Cell 12, 1307-1318.
29. Lim J, Jung JW, Lim CE, Lee MH, Kim BJ, Kim M, Bruce WB, Benfey PN (2005) Conservation and diversification ofSCARECROW in maize.Plant Molecular Biology 59, 619-630. doi: 10.1007/s11103-005-0578-y (Pubitemid 41484195)
30. Liu C, Muchhal US, Mukatira U, Kononowicz AK, Raghothama KG (1998) Tomato phosphate transporter genes are differentially regulated in plant tissues by phosphorus. Plant Physiology 116, 91-99. doi: 10.1104/pp.116.1.91 (Pubitemid 28503844)
31. Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2-DDCt method. Methods 25, 402-408. doi: 10.1006/meth.2001.1262 (Pubitemid 34164012)
32. Lu Y, Yan J, Guimarães CT, Taba S, Ha OZ, Gao S, Chen S, Li J, Zhang S, Vivek BS, Magorokosho C, Mugo S, Makumbi D, Parentoni SN, Shah T, Rong T, Crouch JH, Xu Y (2009) Molecular characterization of global maize breeding germplasm based on genome-wide single nucleotide polymorphisms. Theoretical and Applied Genetics 120, 93-115. doi: 10.1007/s00122-009-1162-7
33. Lynch JP (2011) Root phenes for enhanced soil exploration and phosphorus acquisition: tools for future crops. Plant Physiology 156, 1041-1049. doi: 10.1104/pp.111.175414
34. Lynch JP, Brown KM (2001) Topsoil foraging: an architectural adaptation of plants to low phosphorus availability. Plant and Soil 237, 225-237. doi: 10.1023/A: 1013324727040 (Pubitemid 34115176)
35. Ma Z, Bielenberg DG, Brown KM, Lynch JP (2001) Regulation of root hair density by phosphorus availability in Arabidopsis thaliana. Plant, Cell & Environment 24, 459-467. doi: 10.1046/j.1365-3040.2001.00695.x (Pubitemid 32329041)
36. Magnavaca R, Gardner CO, Clark RB (1987) Evaluationofmaize inbred lines for aluminum tolerance in nutrient solution. In 'Genetic aspects of plant mineral nutrition'. (Eds HW Gabelman, BC Longhman) pp. 255-265. (Martinus Nijhoff Publishers: Dordrecht, The Netherlands)
37. Malavolta E, Vitti GC, Oliveira AS (1989) 'Avaliação do estado nutricional das plantas.' (Potafos: Piracicaba, Brazil)
38. Marchner H (1995) 'Mineral nutritionalofhigher plants.' 2nd edn. (Academic Press: Boston, MA)
39. Miller CR, Ochoa I, Nielsen KL, Beck D, Lynch JP (2003) Genetic variation for adventitious rooting in response to low phosphorus availability: potential utility for phosphorus acquisition from stratified soils. Functional Plant Biology 30, 973-985. doi: 10.1071/FP03078 (Pubitemid 37365499)
40. Moll RH, Kamprath EJ, Jackson WA (1982) Analysis and interpretation of factors which contribute to efficiency of nitrogen utilization. Agronomy Journal 74, 562-564. doi: 10.2134/agronj1982.00021962007400030 037x
41. Mollier A, Pellerin S (1999) Maize root system growth and development as influenced by phosphorus deficiency. Journal of Experimental Botany 50, 487-497.
42. Nielsen KL, Bouma TJ, Lynch JP, Eissensta TDM (1998) Effects of phosphorus availability and vesicular-arbuscular mycorrhizas on the carbon budget of common bean (Phaseolus vulgaris). New Phytologist 139, 647-656. doi: 10.1046/j.1469-8137.1998.00242.x (Pubitemid 28422344)
43. Nielsen KL, Eshel A, Lynch JP (2001) Theeffectofphosphorusavailabilityon the carbon economy of contrasting common bean (Phaseolus vulgarisL.) genotypes. Journal of Experimental Botany 52, 329-339. doi: 10.1093/jexbot/52.355.329 (Pubitemid 32337471)
44. Parentoni SN, de Souza CL, Jr (2008) Phosphorus acquisition and internal utilization efficiency intropical maize genotypes.Pesquisa Agropecuaria Brasileira 43, 893-901. doi: 10.1590/S0100-204X2008000700014
45. Parentoni SN, deSouza CL, Jr, Alves VMC, Gama EEG, Coelho AM, Oliveira AC, Guimarães PEO, Guimarães CT, Vasconcelos MJV, Pacheco CAP, Meirelles WF, Magalhães JV, Guimarães LJM, DaSilva AR, Mendes FF, Schaffert RE (2010) Inheritance and breeding strategies for phosphorus efficiency in tropical maize (Zea Mays L.). Maydica 55, 1-15.
46. Taramino G, Sauer M, Stauffer JL, Multani D, Niu X, Sakai H, Hochholdinger F (2007) The maize (Zea mays L.) RTCS gene encodes a LOB domain protein that is a key regulator of embryonic seminal and post-embryonic shoot-borne root initiation. The Plant Journal 50, 649-659. doi: 10.1111/j.1365-313X.2007.03075.x (Pubitemid 46733753)
47. Ticconi CA, Delatorre CA, Lahner B, Salt DE, Abel S (2004) Arabidopsis pdr2 reveals a phosphate-sensitive checkpoint in root development. The Plant Journal 37, 801-814. doi: 10.1111/j.1365-313X.2004.02005.x (Pubitemid 38370332)
48. Vance CP, Chiou T-J (2011) Phosphorus focus editorial. Plant Physiology 156, 987-988. doi: 10.1104/pp.111.900415
49. Vance CP, Uhde-Stone C, Allan DL (2003) Phosphorus acquisition and use: critical adaptations by plants for securing a nonrenewable resource. New Phytologist 157, 423-447. doi: 10.1046/j.1469-8137.2003.00695.x (Pubitemid 36333205)
50. Walk TC, Jaramillo R, Lynch JP (2006) Architectural tradeoffs between adventitious and basal roots for phosphorus acquisition. Plant and Soil 279, 347-366. doi: 10.1007/s11104-005-0389-6 (Pubitemid 43237822)
51. Wen TJ, Hochholdinger F, Sauer M, Bruce W, Schnable PS (2005) The roothairless1 gene of maize encodes a homolog of sec3, which is involved in polar exocytosis. Plant Physiology 138, 1637-1643. doi: 10.1104/pp.105.062174 (Pubitemid 43142108)
52. Wissuwa M, Gamat G, Ismail AM (2005) Is root growth under phosphorus deficiency affectedby sourceorsink limitations?Journal of Experimental Botany 56, 1943-1950. doi: 10.1093/jxb/eri189 (Pubitemid 40907157)
53. Wissuwa M, Mazzola M, Picard C(2009) Novel approachesin plant breeding for rhizosphere-related traits. Plant and Soil 321, 409-430. doi: 10.1007/s11104-008-9693-2
54. Yang M, Ding G, Shi L, Feng J, Xu F, Meng J (2010) Quantitative trait loci for root morphology in response to low phosphorus stress in Brassica napus. Theoretical and Applied Genetics 121, 181-193. doi: 10.1007/s00122-010-1301-1
55. Zhu J, Kaeppler SM, Lynch JP (2005a) Mapping of QTLs for lateral root branching andlengthinmaize(Zea maysL.) underdifferentialphosphorus supply. Theoretical and Applied Genetics 111, 688-695. doi: 10.1007/s00122-005-2051-3 (Pubitemid 41204210)
56. Zhu J, Kaeppler SM, LynchJP (2005b) Mapping of QTL controlling root hair lengthinmaize (ZeamaysL.)under phosphorusdeficiency.Plant and Soil 270, 299-310. doi: 10.1007/s11104-004-1697-y (Pubitemid 40870394)
57. Zhu J, Mickelson SM, Kaeppler SM, Lynch JP (2006) Detection of quantitative trait loci for seminal root traits in maize (Zea mays L.) seedlings grown under differential phosphorus levels. Theoretical and Applied Genetics 113, 1-10. doi: 10.1007/s00122-006-0260-z
58. Zobel RW (2003) Sensitivity analysis of computer-based diameter measurement from digital images. Crop Science 43, 583-591. doi: 10.2135/cropsci2003.0583 (Pubitemid 36345574)
59. Zobel RW (2008) Hardware and software efficacy in assessment of fine root diameter distributions. Computers and Electronics in Agriculture 60, 178-189. doi: 10.1016/j.compag.2007.08.002