Draft genome sequence of the Pseudomonas aeruginosa bloodstream isolate PABL056

Journal of Bacteriology

Volumn 194, Issue 21, 2012, Pages 5999-5999

  Ozer, Egon A ^a   Allen, Jonathan P ^a   Hauser, Alan R ^a  

^a NORTHWESTERN UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIUM ISOLATE; BLOOD FLOW; CATHETER INFECTION; DNA BASE COMPOSITION; HUMAN; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; PSEUDOMONAS AERUGINOSA; RNA GENE;

BACTEREMIA; DNA, BACTERIAL; GENOME, BACTERIAL; HUMANS; MOLECULAR SEQUENCE DATA; PSEUDOMONAS AERUGINOSA; PSEUDOMONAS INFECTIONS; SEQUENCE ANALYSIS, DNA;

PSEUDOMONAS AERUGINOSA;

EID: 84868613709     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.01421-12     Document Type: Article

References (7)

1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
2. Besemer J, Lomsadze A, Borodovsky M. 2001. GeneMarkS: a self-training methodfor prediction ofgenestarts inmicrobialgenomes.Implications forfinding sequence motifs in regulatory regions. Nucleic Acids Res. 29:2607-2618.
3. Boisvert S, Laviolette F, Corbeil J. 2010. Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies. J. Comput. Biol. 17:1519-1533.
4. Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955-964.
5. Mathee K, et al. 2008. Dynamics of Pseudomonas aeruginosa genome evolution. Proc. Natl. Acad. Sci. U. S. A. 105:3100-3105.
6. Pier GB, Ramphal R. 2010. Pseudomonas aeruginosa, p 2835-2860. In Mandell GL, Bennett JE, Dolin R (ed), Principles and practice of infectious diseases, 7th ed. Elsevier, Churchill Livingstone, Philadelphia, PA.
7. Scheetz MH, et al. 2009. Morbidity associated with Pseudomonas aeruginosa bloodstream infections. Diagn. Microbiol. Infect. Dis. 64:311-319.