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Volumn 13, Issue 6, 2012, Pages 1589-1600

Morphological, molecular and statistical tools to identify Castanea species and their hybrids

Author keywords

Assignment; Chestnut; Genealogical class; Hybrids; Microsatellite; Reference samples

Indexed keywords

ADAPTATION; CLONAL ORGANISM; DATA PROCESSING; GENEALOGY; GENETIC STRUCTURE; GENOTYPE; HYBRID; MORPHOLOGY; PLANT; POPULATION DYNAMICS; STAND STRUCTURE; STATISTICAL ANALYSIS;

EID: 84868516926     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-012-0408-0     Document Type: Article
Times cited : (16)

References (44)
  • 1
    • 48749130024 scopus 로고    scopus 로고
    • Bayesian inference of species hybrids using multilocus dominant genetic markers
    • Anderson EC (2008) Bayesian inference of species hybrids using multilocus dominant genetic markers. Phil Trans R Soc B 363: 2841-2850.
    • (2008) Phil Trans R Soc B , vol.363 , pp. 2841-2850
    • Anderson, E.C.1
  • 2
    • 0036201248 scopus 로고    scopus 로고
    • A model-based method for identifying species hybrids using multilocus genetic data
    • Anderson EC, Thompson EA (2002) A model-based method for identifying species hybrids using multilocus genetic data. Genetics 160: 1217-1229.
    • (2002) Genetics , vol.160 , pp. 1217-1229
    • Anderson, E.C.1    Thompson, E.A.2
  • 4
    • 0037792854 scopus 로고    scopus 로고
    • Isolation and characterization of polymorphic microsatellites in European chestnut (Castanea sativa Mill.)
    • Buck EJ, Hadonou M, James CJ, Blakesley D, Russell K (2003) Isolation and characterization of polymorphic microsatellites in European chestnut (Castanea sativa Mill.). Mol Ecol Notes 3: 239-241.
    • (2003) Mol Ecol Notes , vol.3 , pp. 239-241
    • Buck, E.J.1    Hadonou, M.2    James, C.J.3    Blakesley, D.4    Russell, K.5
  • 6
    • 4544299170 scopus 로고    scopus 로고
    • The cultivation of Castanea sativa (Mill.) in Europe, from its origin to its diffusion on a continental scale
    • Conedera M, Krebs P, Tinner W, Pradella M, Torriani D (2004) The cultivation of Castanea sativa (Mill.) in Europe, from its origin to its diffusion on a continental scale. Veget Hist Archaeobot 13: 161-179.
    • (2004) Veget Hist Archaeobot , vol.13 , pp. 161-179
    • Conedera, M.1    Krebs, P.2    Tinner, W.3    Pradella, M.4    Torriani, D.5
  • 7
    • 70449597689 scopus 로고    scopus 로고
    • Variation in spring and autumn freezing resistance among and within Spanish wild populations of Castanea sativa
    • Díaz R, Johnsen Ø, Fernández-López J (2009) Variation in spring and autumn freezing resistance among and within Spanish wild populations of Castanea sativa. Ann For Sci 66: 708.
    • (2009) Ann For Sci , vol.66 , pp. 708
    • Díaz, R.1    Johnsen, Ø.2    Fernández-López, J.3
  • 8
    • 84868579569 scopus 로고
    • Madrid: Ministerio de Agricultura, IFIE
    • Elorrieta J (1949) El castaño en España, vol 48. Ministerio de Agricultura, IFIE, Madrid.
    • (1949) El castaño En España , vol.48
    • Elorrieta, J.1
  • 9
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study
    • Evanno G, Regnauts S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14: 2611-2620.
    • (2005) Mol Ecol , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnauts, S.2    Goudet, J.3
  • 10
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure: extensions to linked loci and correlated allele frequencies
    • Falush D, Stephens M, Pritchard JK (2003) Inference of population structure: extensions to linked loci and correlated allele frequencies. Genetics 164: 1567-1587.
    • (2003) Genetics , vol.164 , pp. 1567-1587
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 11
    • 84860189928 scopus 로고    scopus 로고
    • Identification of the genealogy of interspecific hybrids between Castanea sativa, Castanea crenata and Castanea mollissima
    • Fernández-López J (2011) Identification of the genealogy of interspecific hybrids between Castanea sativa, Castanea crenata and Castanea mollissima. For Syst 1: 65-80.
    • (2011) For Syst , vol.1 , pp. 65-80
    • Fernández-López, J.1
  • 12
    • 79251579341 scopus 로고    scopus 로고
    • Genetic structure of wild Spanish populations Castanea sativa as revealed by isozyme analysis
    • Fernández-López J, Monteagudo AB (2010) Genetic structure of wild Spanish populations Castanea sativa as revealed by isozyme analysis. For Syst 19: 156-169.
    • (2010) For Syst , vol.19 , pp. 156-169
    • Fernández-López, J.1    Monteagudo, A.B.2
  • 13
    • 84855851559 scopus 로고
    • Fog and substrate conditions for chestnut propagation by leafy cuttings. Symposium Proceedings Mass Production Technology for Genetically improved fast growing forest tree species
    • Fernández-López J, Pereira-Lorenzo S, Miranda-Fontaíña ME (1992) Fog and substrate conditions for chestnut propagation by leafy cuttings. Symposium Proceedings Mass Production Technology for Genetically improved fast growing forest tree species. AFOCEL/IUFRO I: 379-383.
    • (1992) Afocel/Iufro , vol.I , pp. 379-383
    • Fernández-López, J.1    Pereira-Lorenzo, S.2    Miranda-Fontaíña, M.E.3
  • 14
    • 84855829258 scopus 로고
    • Esquema de la producción de materiales clonales forestales y frutales de castaño híbrido (Castanea crenata × Castanea sativa)
    • Fernández-López J, Miranda-Fontaíña ME, Pereira-Lorenzo S (1995) Esquema de la producción de materiales clonales forestales y frutales de castaño híbrido (Castanea crenata × Castanea sativa). ITEA 91: 149-156.
    • (1995) Itea , vol.91 , pp. 149-156
    • Fernández-López, J.1    Miranda-Fontaíña, M.E.2    Pereira-Lorenzo, S.3
  • 15
    • 33645842949 scopus 로고    scopus 로고
    • Geographic differentiation in adaptive traits of wild chestnut Spanish populations (Castanea sativa Miller)
    • Fernández-López J, Zas R, Blanco-Silva R, Díaz R (2005a) Geographic differentiation in adaptive traits of wild chestnut Spanish populations (Castanea sativa Miller). Invest Agrar Sist Recur For 14: 13-26.
    • (2005) Invest Agrar Sist Recur For , vol.14 , pp. 13-26
    • Fernández-López, J.1    Zas, R.2    Blanco-Silva, R.3    Díaz, R.4
  • 17
    • 77953911797 scopus 로고    scopus 로고
    • Caracteres de selección en campo de clones de castaño híbrido (Castanea crenata × Castanea sativa) para producción de madera
    • Fernández-López J, Miranda-Fontaíña ME, Furones-Pérez P (2008) Caracteres de selección en campo de clones de castaño híbrido (Castanea crenata × Castanea sativa) para producción de madera. Cuad Soc Esp Cienc For 24: 39-43.
    • (2008) Cuad Soc Esp Cienc For , vol.24 , pp. 39-43
    • Fernández-López, J.1    Miranda-Fontaíña, M.E.2    Furones-Pérez, P.3
  • 18
    • 67649344489 scopus 로고    scopus 로고
    • Molecular and morphological evidence of natural interspecific hybridization between the uncommon Eucalyptus aggregata and the widespread E. rubida and E. viminalis
    • Field DL, Ayre DJ, Whelan RJ, Young AG (2009) Molecular and morphological evidence of natural interspecific hybridization between the uncommon Eucalyptus aggregata and the widespread E. rubida and E. viminalis. Conserv Genet 10: 881-896.
    • (2009) Conserv Genet , vol.10 , pp. 881-896
    • Field, D.L.1    Ayre, D.J.2    Whelan, R.J.3    Young, A.G.4
  • 22
    • 0038060807 scopus 로고    scopus 로고
    • Microsatellites in plants: a new class of molecular markers
    • Gupta PK, Balyan HS, Sharma PC, Ramesh B (1996) Microsatellites in plants: a new class of molecular markers. Curr Sci 1: 45-54.
    • (1996) Curr Sci , vol.1 , pp. 45-54
    • Gupta, P.K.1    Balyan, H.S.2    Sharma, P.C.3    Ramesh, B.4
  • 23
    • 0032458261 scopus 로고    scopus 로고
    • Characterization of (GA)n microsatellite loci from Quercus robur
    • Kampfer S, Lexer C, Glössl J, Steinkellner H (1998) Characterization of (GA)n microsatellite loci from Quercus robur. Hereditas 129: 183-186.
    • (1998) Hereditas , vol.129 , pp. 183-186
    • Kampfer, S.1    Lexer, C.2    Glössl, J.3    Steinkellner, H.4
  • 24
    • 4544268076 scopus 로고    scopus 로고
    • Quaternary refugia of the sweet chestnut (Castanea sativa Mill.): an extended palynological approach
    • Krebs P, Conedera M, Pradella M, Torriani D, Felber M, Tinner W (2004) Quaternary refugia of the sweet chestnut (Castanea sativa Mill.): an extended palynological approach. Veget Hist Archaeobot 13: 145-160.
    • (2004) Veget Hist Archaeobot , vol.13 , pp. 145-160
    • Krebs, P.1    Conedera, M.2    Pradella, M.3    Torriani, D.4    Felber, M.5    Tinner, W.6
  • 25
    • 0037293996 scopus 로고    scopus 로고
    • Development and characterization of microsatellite markers in Castanea sativa (Mill.)
    • Marinoni D, Akkak A, Bounous G, Edwards KJ, Botta R (2003) Development and characterization of microsatellite markers in Castanea sativa (Mill.). Mol Breed 11: 127-136.
    • (2003) Mol Breed , vol.11 , pp. 127-136
    • Marinoni, D.1    Akkak, A.2    Bounous, G.3    Edwards, K.J.4    Botta, R.5
  • 26
    • 65549138075 scopus 로고    scopus 로고
    • Identification and characterisation of traditional chestnut varieties of southern Spain using morphological and simple sequence repeat (SSRs) markers
    • Martín MA, Alvarez JB, Mattioni C, Cherubini M, Villani F, Martín LM (2009) Identification and characterisation of traditional chestnut varieties of southern Spain using morphological and simple sequence repeat (SSRs) markers. Ann Appl Biol 154: 389-398.
    • (2009) Ann Appl Biol , vol.154 , pp. 389-398
    • Martín, M.A.1    Alvarez, J.B.2    Mattioni, C.3    Cherubini, M.4    Villani, F.5    Martín, L.M.6
  • 30
    • 0035707347 scopus 로고    scopus 로고
    • Genotypic and environmental variation of Castanea crenata × C. sativa and Castanea sativa clones in aptitude to micropropagation
    • Miranda-Fontaíña ME, Fernández-López J (2001) Genotypic and environmental variation of Castanea crenata × C. sativa and Castanea sativa clones in aptitude to micropropagation. Silvae genet 50: 153-162.
    • (2001) Silvae Genet , vol.50 , pp. 153-162
    • Miranda-Fontaíña, M.E.1    Fernández-López, J.2
  • 32
    • 0027395113 scopus 로고
    • Estimating the frequencies of genetically distinct classes of individuals in hybridized populations
    • Nason JD, Ellstrand NC (1993) Estimating the frequencies of genetically distinct classes of individuals in hybridized populations. J Hered 84: 1-12.
    • (1993) J Hered , vol.84 , pp. 1-12
    • Nason, J.D.1    Ellstrand, N.C.2
  • 33
    • 33751320684 scopus 로고    scopus 로고
    • Hybridlab (version 1.0): a program for generating simulated hybrids from population samples
    • Nielsen E, Bach L, Kotlicki P (2006) Hybridlab (version 1. 0): a program for generating simulated hybrids from population samples. Mol Ecol Notes 6: 971-973.
    • (2006) Mol Ecol Notes , vol.6 , pp. 971-973
    • Nielsen, E.1    Bach, L.2    Kotlicki, P.3
  • 35
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 36
    • 0000262278 scopus 로고
    • GENEPOP (version 3.4)-a population genetics software for exact tests and ecumenicism
    • Raymond M, Rousset F (1995) GENEPOP (version 3. 4)-a population genetics software for exact tests and ecumenicism. J Hered 86: 248-249.
    • (1995) J Hered , vol.86 , pp. 248-249
    • Raymond, M.1    Rousset, F.2
  • 37
    • 33645884099 scopus 로고    scopus 로고
    • Genetic variation in susceptibility to Phytophthora cambivora in European chestnut (Castanea sativa)
    • Robin C, Morel O, Vettraino AM, Perlerou C, Diamandis S, Vannini A (2006) Genetic variation in susceptibility to Phytophthora cambivora in European chestnut (Castanea sativa). For Ecol Manag 226: 199-207.
    • (2006) For Ecol Manag , vol.226 , pp. 199-207
    • Robin, C.1    Morel, O.2    Vettraino, A.M.3    Perlerou, C.4    Diamandis, S.5    Vannini, A.6
  • 38
    • 34547861256 scopus 로고    scopus 로고
    • CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure
    • Rosenberg N, Jakobsson M (2007) CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics 23: 1801-1806.
    • (2007) Bioinformatics , vol.23 , pp. 1801-1806
    • Rosenberg, N.1    Jakobsson, M.2
  • 39
    • 58149464660 scopus 로고    scopus 로고
    • Efficiency of markers and methods for detecting hybrids and introgression in stocked populations
    • Sanz N, Araguas R, Fernández R, Vera M, García-Marín JL (2009) Efficiency of markers and methods for detecting hybrids and introgression in stocked populations. Conserv Genet 10: 225-236.
    • (2009) Conserv Genet , vol.10 , pp. 225-236
    • Sanz, N.1    Araguas, R.2    Fernández, R.3    Vera, M.4    García-Marín, J.L.5
  • 42
    • 33645076280 scopus 로고    scopus 로고
    • Efficiency of model-based Bayesian methods for detecting hybrid individuals under different hybridization scenarios and with different numbers of loci
    • Vähä JP, Primmer CR (2006) Efficiency of model-based Bayesian methods for detecting hybrid individuals under different hybridization scenarios and with different numbers of loci. Mol Ecol 15: 63-72.
    • (2006) Mol Ecol , vol.15 , pp. 63-72
    • Vähä, J.P.1    Primmer, C.R.2
  • 43
    • 4344606590 scopus 로고    scopus 로고
    • MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data
    • van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4: 535-538.
    • (2004) Mol Ecol Notes , vol.4 , pp. 535-538
    • van Oosterhout, C.1    Hutchinson, W.F.2    Wills, D.P.M.3    Shipley, P.4
  • 44
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir BS, Cockerham CC (1984) Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.