Spencermartinsiella ligniputridi sp. nov., a yeast species isolated from rotten wood

International Journal of Systematic and Evolutionary Microbiology

Volumn 62, Issue 11, 2012, Pages 2799-2804

  Dlauchy, Dénes ^a   Lee, Ching Fu ^b   Péter, Gábor ^a  

^a Institute of Data Analytics and Information Systems   (Hungary)

^b NATIONAL TSING HUA UNIVERSITY   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA;

ANAMORPH; ARTICLE; CANDIDA CELLULOSICOLA; CLADISTICS; FUNGAL STRAIN; FUNGUS ISOLATION; HUNGARY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SPENCERMARTINSIELLA EUROPAEA; SPENCERMARTINSIELLA LIGNIPUTRIDI; YEAST;

DNA, FUNGAL; HUNGARY; MOLECULAR SEQUENCE DATA; MYCOLOGICAL TYPING TECHNIQUES; PHYLOGENY; RNA, RIBOSOMAL; SACCHAROMYCETALES; SEQUENCE ANALYSIS, DNA; WOOD;

CANDIDA;

EID: 84868327166     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.042317-0     Document Type: Article

References (23)

1. Chen, Y.-C., Eisner, J. D., Kattar, M. M., Rassoulian-Barrett, S. L., Lafe, K., Bui, U., Limaye, A. P. & Cookson, B. T. (2001). Polymorphic internal transcribed spacer region 1 DNA sequences identify medically important yeasts. J Clin Microbiol 39, 4042-4051.
2. Clement, M., Posada, D. & Crandall, K. A. (2000). TCS: a computer program to estimate gene genealogies. Mol Ecol 9, 1657-1659.
3. Dlauchy, D., Tornai-Lehoczki, J., Fülöp, L. & Péter, G. (2003). Pichia (Komagataella) pseudopastoris sp. nov., a new yeast species from Hungary. Antonie van Leeuwenhoek 83, 327-332.
4. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
5. Guo, X., Zhu, H. & Bai, F.-Y. (2012). Candida cellulosicola sp. nov., a xylose-utilizing anamorphic yeast from rotten wood. Int J Syst Evol Microbiol 62, 242-245.
6. Kurtzman, C. P. (2011). Sugiyamaella Kurtzman & Robnett (2007). In The Yeasts, a Taxonomic Study, 5th edn, pp. 817-822. Edited by C. P. Kurtzman, J. W. Fell & T. Boekhout. Amsterdam: Elsevier.
7. Kurtzman, C. P. & Robnett, C. J. (1998). Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences. Antonie van Leeuwenhoek 73, 331-371.
8. Kurtzman, C. P. & Robnett, C. J. (2007). Multigene phylogenetic analysis of the Trichomonascus, Wickerhamiella and Zygoascus yeast clades, and the proposal of Sugiyamaella gen. nov. and 14 new species combinations. FEMS Yeast Res 7, 141-151.
9. Lachance, M. A., Dobson, J., Wijayanayaka, D. N. & Smith, A. M. (2010). The use of parsimony network analysis for the formal delineation of phylogenetic species of yeasts: Candida apicola, Candida azyma, and Candida parazyma sp. nov., cosmopolitan yeasts associated with floricolous insects. Antonie van Leeuwenhoek 97, 155-170.
10. Lachance, M. A., Wijayanayaka, T. M., Bundus, J. D. & Wijayanayaka, D. N. (2011a). Ribosomal DNA sequence polymorphism and the delineation of two ascosporic yeast species: Metschnikowia agaves and Starmerella bombicola. FEMS Yeast Res 11, 324-333.
11. Lachance, M. A., Boekhout, T., Scorzetti, G., Fell, J. W. & Kurtzman, C. P. (2011b). Candida Berkhout (1923). In The Yeasts, a Taxonomic Study, 5th edn, pp. 987-1278. Edited by C. P. Kurtzman, J. W. Fell & T. Boekhout. Amsterdam: Elsevier.
12. Liu, C. H., Young, S. S., Chang, T. C. & Lee, C. F. (2008). Candida dajiaensis sp. nov., Candida yuanshanicus sp. nov., Candida jianshihensis sp. nov., and Candida sanyiensis sp. nov., four anamorphic, ascomycetous yeast species isolated from soil in Taiwan. FEMS Yeast Res 8, 815-822.
13. Nilsson, R. H., Kristiansson, E., Ryberg, M., Hallenberg, N. & Larsson, K.-H. (2008). Intraspecific ITS variability in the kingdom fungi as expressed in the international sequence databases and its implications for molecular species identification. Evol Bioinform Online 4, 193-201.
14. Péter, G., Tornai-Lehoczki, J. & Dlauchy, D. (2009). Candida ogatae sp. nov., an anamorphic member of the Kuraishia clade. FEMS Yeast Res 9, 328-333.
15. Péter, G., Dlauchy, D., Tornai-Lehoczki, J., Suzuki, M. & Kurtzman, C. P. (2011). Spencermartinsiella europaea gen. nov., sp. nov., a new member of the family Trichomonascaceae. Int J Syst Evol Microbiol 61, 993-1000.
16. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
17. Smith, M. Th., de Hoog, G. S., Malloch, D. & Kurtzman, C. P. (2011a). Trichomonascus H.S. Jackson emend. Kurtzman & Robnett (2007). In The Yeasts, a Taxonomic Study, 5th edn, pp. 875-881. Edited by C. P. Kurtzman, J. W. Fell & T. Boekhout. Amsterdam: Elsevier.
18. Smith, M. Th., de Hoog, G. S., Statzell-Tallman, A. & Kurtzman, C. P. (2011b). Blastobotrys von Klopotek (1967). In The Yeasts, a Taxonomic Study, 5th edn, pp. 959-977. Edited by C. P. Kurtzman, J. W. Fell & T. Boekhout. Amsterdam: Elsevier.
19. Sugita, T., Nishikawa, A., Ikeda, R. & Shinoda, T. (1999). Identification of medically relevant Trichosporon species based on sequences of internal transcribed spacer regions and construction of a database for Trichosporon identification. J Clin Microbiol 37, 1985-1993.
20. Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28, 2731-2739.
21. Yarrow, D. (1998). Methods for the isolation, maintenance and identification of yeasts. In The Yeasts, a Taxonomic Study, 4th edn, pp. 77-100. Edited by C. P. Kurtzman & J. W. Fell. Amsterdam: Elsevier.
22. Yurkov, A. M., Kemler, M. & Begerow, D. (2011). Species accumulation curves and incidence-based species richness estimators to appraise the diversity of cultivable yeasts from beech forest soils. PLoS ONE 6, e23671.
23. Zhang, Z., Schwartz, S., Wagner, L. & Miller, W. (2000). A greedy algorithm for aligning DNA sequences. J Comput Biol 7, 203-214.