메뉴 건너뛰기




Volumn 45, Issue 2, 2012, Pages 406-410

Complete nucleotide sequence of a South African isolate of grapevine fanleaf virus

Author keywords

Arabis mosaic virus; Genome sequencing; Grapevine fanleaf virus; Phylogeny; Recombination events

Indexed keywords

NUCLEOTIDE; POLYADENYLIC ACID; VIRUS RNA;

EID: 84868151080     PISSN: 09208569     EISSN: 1572994X     Source Type: Journal    
DOI: 10.1007/s11262-012-0765-2     Document Type: Article
Times cited : (6)

References (28)
  • 1
    • 19944426743 scopus 로고    scopus 로고
    • Grapevine fanleaf virus: Still a major threat to the grapevine industry
    • P. Andret-Link, C. Laporte, L. Valat et al., Grapevine fanleaf virus: Still a major threat to the grapevine industry. J. Plant Pathol. 86, 183-195 (2004)
    • (2004) J. Plant Pathol. , vol.86 , pp. 183-195
    • Andret-Link, P.1    Laporte, C.2    Valat, L.3
  • 2
    • 0008723826 scopus 로고
    • Viruses and virus diseases of the grapevine
    • W.B. Hewitt, Viruses and virus diseases of the grapevine. Rev. App. Mycol. 47, 433-455 (1968)
    • (1968) Rev. App. Mycol. , vol.47 , pp. 433-455
    • Hewitt, W.B.1
  • 3
    • 0346051414 scopus 로고
    • Strategies against Grapevine fanleaf virus and its nematode vector
    • D.J. Raski, A.C. Goheen, L.A. Lider, C.P. Meredith, Strategies against Grapevine fanleaf virus and its nematode vector. Plant Dis. 67, 335-338 (1983)
    • (1983) Plant Dis. , vol.67 , pp. 335-338
    • Raski, D.J.1    Goheen, A.C.2    Lider, L.A.3    Meredith, C.P.4
  • 4
    • 0027270738 scopus 로고
    • Genome organization of Grapevine fanleaf nepovirus RNA2 deduced from the 122 K polyprotein P2 in vitro cleavage products
    • R. Margis, C. Ritzenthaler, J. Reinbolt, M. Pinck, L. Pinck, Genome organization of Grapevine fanleaf nepovirus RNA2 deduced from the 122 K polyprotein P2 in vitro cleavage products. J. Gen. Virol. 74, 1919-1926 (1993)
    • (1993) J. Gen. Virol. , vol.74 , pp. 1919-1926
    • Margis, R.1    Ritzenthaler, C.2    Reinbolt, J.3    Pinck, M.4    Pinck, L.5
  • 7
    • 0025951709 scopus 로고
    • Complete nucleotide sequence and genetic organization of Grapevine fanleaf nepovirus RNA1
    • C. Ritzenthaler, M. Viry, M. Pinck, R. Margis, M. Fuchs, L. Pinck, Complete nucleotide sequence and genetic organization of Grapevine fanleaf nepovirus RNA1. J. Gen. Virol. 72, 2357-2365 (1991)
    • (1991) J. Gen. Virol. , vol.72 , pp. 2357-2365
    • Ritzenthaler, C.1    Viry, M.2    Pinck, M.3    Margis, R.4    Fuchs, M.5    Pinck, L.6
  • 8
    • 73649111720 scopus 로고    scopus 로고
    • Genome diversity and intra-and interspecies recombination events in Grapevine fanleaf virus
    • T.A. Mekuria, L.R. Gutha, R.R. Martin, R.A. Naidu, Genome diversity and intra-and interspecies recombination events in Grapevine fanleaf virus. Phytopathology 99, 1394-1402 (2009)
    • (2009) Phytopathology , vol.99 , pp. 1394-1402
    • Mekuria, T.A.1    Gutha, L.R.2    Martin, R.R.3    Naidu, R.A.4
  • 9
    • 0025362003 scopus 로고
    • RNA2 of Grapevine fanleaf virus: Sequence analysis and coat protein cistron location
    • M.A. Serghini, M. Fuchs, M. Pinck, J. Reinbolt, B. Walter, L. Pinck, RNA2 of Grapevine fanleaf virus: Sequence analysis and coat protein cistron location. J. Gen. Virol. 71, 1433-1441 (1990)
    • (1990) J. Gen. Virol. , vol.71 , pp. 1433-1441
    • Serghini, M.A.1    Fuchs, M.2    Pinck, M.3    Reinbolt, J.4    Walter, B.5    Pinck, L.6
  • 10
    • 62249084040 scopus 로고    scopus 로고
    • Phylogeny and genetic recombination of Grapevine fanleaf virus isolates from naturally infected vineyards in Tunisia
    • M. Boulila, Phylogeny and genetic recombination of Grapevine fanleaf virus isolates from naturally infected vineyards in Tunisia. Phytopathol. Mediterr. 46, 285-294 (2007)
    • (2007) Phytopathol. Mediterr. , vol.46 , pp. 285-294
    • Boulila, M.1
  • 11
    • 20444498950 scopus 로고    scopus 로고
    • RT-PCR-RFLP for genetic diversity analysis of tunisian Grapevine fanleaf virus isolates in their natural host plants
    • S. Fattouch, H. Acheche, S. M'hirsi et al., RT-PCR-RFLP for genetic diversity analysis of tunisian Grapevine fanleaf virus isolates in their natural host plants. J. Virol. Methods 127, 126-132 (2005)
    • (2005) J. Virol. Methods , vol.127 , pp. 126-132
    • Fattouch, S.1    Acheche, H.2    M'hirsi, S.3
  • 12
    • 67349223949 scopus 로고    scopus 로고
    • Burger genetic variability within the coat protein gene of grapevine fanleaf virus isolates from South Africa J.T., The evaluation of RT-PCR DAS-ELISA, immunostrips as virus diagnostic assays
    • A. Liebenberg, M.J. Freeborough, C.J. Visser, D.U. Bellstedt, J.T. Burger, Genetic variability within the coat protein gene of Grapevine fanleaf virus isolates from South Africa and the evaluation of RT-PCR, DAS-ELISA and immunostrips as virus diagnostic assays. Virus Res. 142, 28-35 (2009)
    • (2009) Virus Res. , vol.142 , pp. 28-35
    • Liebenberg, A.1    Freeborough, M.J.2    Visser, C.J.3    Bellstedt, D.U.4
  • 13
    • 62549144827 scopus 로고    scopus 로고
    • Modified cetyltrimethylammonium bromide method improves robustness and versatility: The benchmark for plant RNA extraction
    • E.J. White, M. Venter, N.F. Hiten, J.T. Burger, Modified cetyltrimethylammonium bromide method improves robustness and versatility: The benchmark for plant RNA extraction. Biotechnol. J. 3, 1424-1428 (2008)
    • (2008) Biotechnol. J. , vol.3 , pp. 1424-1428
    • White, E.J.1    Venter, M.2    Hiten, N.F.3    Burger, J.T.4
  • 15
    • 0035046755 scopus 로고    scopus 로고
    • Reverse transcriptase template switching: A SMART approach for full-length cDNA library construction
    • Y.Y. Zhu, E.M. Machleder, A. Chenchik, R. Li, P.D. Siebert, Reverse transcriptase template switching: A SMART approach for full-length cDNA library construction. Biotechniques 30, 892-897 (2001)
    • (2001) Biotechniques , vol.30 , pp. 892-897
    • Zhu, Y.Y.1    Machleder, E.M.2    Chenchik, A.3    Li, R.4    Siebert, P.D.5
  • 16
    • 0000280422 scopus 로고
    • Analysis of doublestranded RNA for plant virus diagnosis
    • R.A. Valverde, S.T. Nameth, R.L. Jordan, Analysis of doublestranded RNA for plant virus diagnosis. Plant Dis. 74, 255-258 (1990)
    • (1990) Plant Dis. , vol.74 , pp. 255-258
    • Valverde, R.A.1    Nameth, S.T.2    Jordan, R.L.3
  • 17
    • 0001122406 scopus 로고
    • Evidence for viruslike agents in avocado
    • R.L. Jordan, J.A. Dodds, H.D. Ohr, Evidence for viruslike agents in avocado. Phytopathology 73, 1130-1135 (1983)
    • (1983) Phytopathology , vol.73 , pp. 1130-1135
    • Jordan, R.L.1    Dodds, J.A.2    Ohr, H.D.3
  • 18
    • 0000230881 scopus 로고
    • Isolation and analysis of double-stranded RNA from virus-infected plant and fungal tissue
    • T.J. Morris, J.A. Dodds, Isolation and analysis of double-stranded RNA from virus-infected plant and fungal tissue. Phytopathology 69, 854-858 (1979)
    • (1979) Phytopathology , vol.69 , pp. 854-858
    • Morris, T.J.1    Dodds, J.A.2
  • 19
    • 18144367264 scopus 로고    scopus 로고
    • Complete genome sequences of two new variants of grapevine rupestris stem pitting-associated virus and comparative analyses
    • B. Meng, C. Li, W. Wang, D. Goszczynski, D. Gonsalves, Complete genome sequences of two new variants of grapevine rupestris stem pitting-associated virus and comparative analyses. J. Gen. Virol. 86, 1555-1560 (2005)
    • (2005) J. Gen. Virol. , vol.86 , pp. 1555-1560
    • Meng, B.1    Li, C.2    Wang, W.3    Goszczynski, D.4    Gonsalves, D.5
  • 20
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • J.D. Thompson, D.G. Higgins, T.J. Gibson, CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22, 4673-4680 (1994)
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 21
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • K. Tamura, D. Peterson, N. Peterson, G. Stecher, M. Nei, S. Kumar, MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731-2739 (2011)
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 23
    • 0032889281 scopus 로고    scopus 로고
    • Full length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination
    • K.S. Lole, R.C. Bollinger, R.S. Paranjape, K. Gadkari, S.S. Kulkami, N.G. Novak, R. Ingersoll, H.W. Sheppard, S.C. Ray, Full length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J. Virol. 73, 152-160 (1999)
    • (1999) J. Virol. , vol.73 , pp. 152-160
    • Lole, K.S.1    Bollinger, R.C.2    Paranjape, R.S.3    Gadkari, K.4    Kulkami, S.S.5    Novak, N.G.6    Ingersoll, R.7    Sheppard, H.W.8    Ray, S.C.9
  • 24
    • 77955279752 scopus 로고    scopus 로고
    • Genetic structure and molecular variability of Grapevine fanleaf virus populations
    • J.E. Oliver, E. Vigne, M. Fuchs, Genetic structure and molecular variability of Grapevine fanleaf virus populations. Virus Res. 152, 30-40 (2010)
    • (2010) Virus Res. , vol.152 , pp. 30-40
    • Oliver, J.E.1    Vigne, E.2    Fuchs, M.3
  • 26
    • 4043119753 scopus 로고    scopus 로고
    • Population structure and genetic diversity within Grapevine fanleaf virus isolates from a naturally infected vineyard: Evidence for mixed infection and recombination
    • E. Vigne, M. Bergdoll, S. Guyader, M. Fuchs, Population structure and genetic diversity within Grapevine fanleaf virus isolates from a naturally infected vineyard: Evidence for mixed infection and recombination. J. Gen. Virol. 85, 2435-2445 (2004)
    • (2004) J. Gen. Virol. , vol.85 , pp. 2435-2445
    • Vigne, E.1    Bergdoll, M.2    Guyader, S.3    Fuchs, M.4
  • 27
    • 26844472085 scopus 로고    scopus 로고
    • Characterization of a naturally occurring Grapevine fanleaf virus recombinant isolate
    • E. Vigne, G. Demangeat, V. Komar, M. Fuchs, Characterization of a naturally occurring Grapevine fanleaf virus recombinant isolate. Arch. Virol. 150, 2241-2255 (2005)
    • (2005) Arch. Virol. , vol.150 , pp. 2241-2255
    • Vigne, E.1    Demangeat, G.2    Komar, V.3    Fuchs, M.4
  • 28
    • 50849131877 scopus 로고    scopus 로고
    • Multiple interspecies recombination events within RNA2 of Grapevine fanleaf virus and Arabis mosaic virus
    • E. Vigne, A. Marmonier, M. Fuchs, Multiple interspecies recombination events within RNA2 of Grapevine fanleaf virus and Arabis mosaic virus. Arch. Virol. 153, 1771-1776 (2008)
    • (2008) Arch. Virol. , vol.153 , pp. 1771-1776
    • Vigne, E.1    Marmonier, A.2    Fuchs, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.