Quantifying introgression risk with realistic population genetics

Proceedings of the Royal Society B: Biological Sciences

Volumn 279, Issue 1748, 2012, Pages 4747-4754

  Ghosh, Atiyo ^a   Meirmans, Patrick G ^b   Haccou, Patsy ^a  

^a LEIDEN UNIVERSITY   (Netherlands)

^b UNIVERSITY OF AMSTERDAM   (Netherlands)

Author keywords

Branching process; Establishment; GMO; Population genetic simulation; Transgenes

Indexed keywords

EID: 84868117105     PISSN: 09628452     EISSN: 14712954     Source Type: Journal    
DOI: 10.1098/rspb.2012.1907     Document Type: Article

References (21)

1. Levin, D. A., Francisco-Ortega, J. & Jansen, R. K. 1996 Hybridization and the extinction of rare plant species. Conserv. Biol. 10, 10-16. (doi:10.1046/j.1523-1739.1996.10010010.x)
2. Ellstrand, N. C., Prentice, H. C. & Hancock, J. F. 1999 Gene flow and introgression from domesticated plants into their wild relatives. Annu. Rev. Ecol. Syst. 30, 539-563. (doi:10.1146/annurev.ecolsys.30.1.539)
3. Stewart Jr, C. N., Halfhill, M. D. & Warwich, S. I. 2003 Genetic modification: transgene introgression from genetically modified crops to their wild relatives. Nat. Rev. Genet. 4, 806-817. (doi:10.1038/nrg1179)
4. Kwit, C., Moon, H. S., Warwick, S. I. & Stewart Jr, C. N. 2011 Transgene introgression in crop relative: molecular evidence and mitigation strategies. Trends Biotechnol. 29, 284-293. (doi:10.1016/j.tibtech.2011.02.003)
5. Hall, R. J., Hastings, A. & Ayres, D. R. 2006 Explaining the explosion: modelling hybrid invasions. Proc. R. Soc. B 273, 1385-1389. (doi:10.1098/rspb.2006.3473)
6. Demon, I., Haccou, P. & van den Bosch, F. 2007 Introgression of resistance genes between populations: a model study of insecticide resistance in Bemisia tabaci. Theor. Popul. Biol. 72, 292-304. (doi:10.1016/j.tpb.2007.06.005)
7. Lambert, A. 2006 Probability under weak selection: a branching process unifying approach. Theor. Popul. Biol. 69, 419-441. (doi:10.1016/j.tpb.2006.01.002)
8. Kimura, M. 1962 On the probability of fixation of mutant genes in a population. Genetics 47, 713-719.
9. Thompson, C. J., Thompson, B. J. P., Ades, P. K., Cousens, R., Carinier-Gere, P., Landman, K., Newbigin, E. & Burgman, M. A. 2003 Model-based analysis of the likelihood of gene introgression from genetically modified crops into wild relatives. Ecol. Model. 162, 199-209. (doi:10.1016/S0304-3800(02)00347-2)
10. Meirmans, P. G., Bousquet, J. & Isabel, N. 2009 A metapopulation model for the introgression from genetically modified plants into their wild relatives. Evol. Appl. 2, 160-171. (doi:10.1111/j.1752-4571.2008.00050.x)
11. Wei, W. & Krone, S. M. 2005 Spatial invasion by a mutant pathogen. J. Theor. Biol. 236, 335-348. (doi:10.1016/j.jtbi.2005.03.016)
12. Parham, P. E. & Michael, E. 2011 Outbreak properties of epidemic models: the roles of temporal forcing and stochasticity on pathogen invasion dynamics. J. Theor. Biol. 271, 1-9. (doi:10.1016/j.jtbi.2010.11.015)
13. Zalba, S. M., Songlioni, M. I., Compagnoni, C. A. & Belenguer, C. J. 1998 Using a habitat model to assess the risk of invasion by an exotic plant. Biol. Conserv. 93, 203-208. (doi:10.1016/S0006-3207(99)00146-9)
14. Michor, F., Nowak, M. A. & Iwasa, Y. 2005 Stochastic dynamics of metastasis formation. J. Theor. Biol. 240, 521-530. (doi:10.1016/j.jtbi.2005.10.021)
15. Kalbfleisch, J. D. & Prentice, R. L. 2002 The statistical analysis of failure time data, 2nd edn. London, UK: John Wiley & Sons.
16. Ghosh, A. & Haccou, P. 2010 Quantifying stochastic introgression processes with hazard rates. Theor. Popul. Biol. 77, 171-180. (doi:10.1016/j.tpb.2010.01.002)
17. Ghosh, A., Serra, M. C. & Haccou, P. 2011 Quantifying time-inhomogeneous stochastic introgression processes with hazard rates. Theor. Popul. Biol. 81, 253-263. (doi:10.1016/j.tpb.2011.11.006)
18. Haccou, P., Jagers, P. & Vatutin, V. A. 2005 Branching processes. Variation, growth and extinction of populations. Cambridge, UK: Cambridge University Press.
19. Haccou, P. & Meelis, E. 1994 Statistical analysis of behavioural data. Oxford, UK: Oxford University Press.
20. Otto, S. P. & Whitlock, M. C. 2008 Fixation probabilities and times. eLS, 14 March. (doi:10.1002/97804700159 02.a0005464.pub2)
21. Hanski, I. 1999 Metapopulation ecology. Oxford, UK: Oxford University Press.