-
1
-
-
79953162883
-
Function and regulation of the Mediator complex
-
Conaway RC, Conaway JW (2011) Function and regulation of the Mediator complex. Curr Opin Genet Dev 21:225-230.
-
(2011)
Curr Opin Genet Dev
, vol.21
, pp. 225-230
-
-
Conaway, R.C.1
Conaway, J.W.2
-
2
-
-
18844451820
-
Mediator and the mechanism of transcriptional activation
-
Kornberg RD (2005) Mediator and the mechanism of transcriptional activation. Trends Biochem Sci 30:235-239.
-
(2005)
Trends Biochem Sci
, vol.30
, pp. 235-239
-
-
Kornberg, R.D.1
-
3
-
-
79952803747
-
Direct interaction of RNA polymerase II and mediator required for transcription in vivo
-
Soutourina J, Wydau S, Ambroise Y, Boschiero C, Werner M (2011) Direct interaction of RNA polymerase II and mediator required for transcription in vivo. Science 331: 1451-1454.
-
(2011)
Science
, vol.331
, pp. 1451-1454
-
-
Soutourina, J.1
Wydau, S.2
Ambroise, Y.3
Boschiero, C.4
Werner, M.5
-
4
-
-
0023651270
-
Functional redundancy and structural polymorphism in the large subunit of RNA polymerase II
-
Nonet M, Sweetser D, Young RA (1987) Functional redundancy and structural polymorphism in the large subunit of RNA polymerase II. Cell 50:909-915.
-
(1987)
Cell
, vol.50
, pp. 909-915
-
-
Nonet, M.1
Sweetser, D.2
Young, R.A.3
-
5
-
-
0024507111
-
Mutations in RNA polymerase II enhance or suppress mutations in GAL4
-
Allison LA, Ingles CJ (1989) Mutations in RNA polymerase II enhance or suppress mutations in GAL4. Proc Natl Acad Sci USA 86:2794-2798.
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 2794-2798
-
-
Allison, L.A.1
Ingles, C.J.2
-
6
-
-
0025027915
-
RNA polymerase II C-terminal repeat influences response to transcriptional enhancer signals
-
Scafe C, et al. (1990) RNA polymerase II C-terminal repeat influences response to transcriptional enhancer signals. Nature 347:491-494.
-
(1990)
Nature
, vol.347
, pp. 491-494
-
-
Scafe, C.1
-
7
-
-
0026300116
-
RNA polymerase II carboxy-terminal domain contributes to the response to multiple acidic activators in vitro
-
Liao SM, Taylor IC, Kingston RE, Young RA (1991) RNA polymerase II carboxy-terminal domain contributes to the response to multiple acidic activators in vitro. Genes Dev 5(12B):2431-2440.
-
(1991)
Genes Dev
, vol.5
, Issue.B12
, pp. 2431-2440
-
-
Liao, S.M.1
Taylor, I.C.2
Kingston, R.E.3
Young, R.A.4
-
8
-
-
0024354605
-
Intragenic and extragenic suppressors of mutations in the heptapeptide repeat domain of Saccharomyces cerevisiae RNA polymerase II
-
Nonet ML, Young RA (1989) Intragenic and extragenic suppressors of mutations in the heptapeptide repeat domain of Saccharomyces cerevisiae RNA polymerase II. Genetics 123:715-724.
-
(1989)
Genetics
, vol.123
, pp. 715-724
-
-
Nonet, M.L.1
Young, R.A.2
-
9
-
-
0028282551
-
A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain of RNA polymerase II
-
Kim YJ, Björklund S, Li Y, Sayre MH, Kornberg RD (1994) A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain of RNA polymerase II. Cell 77:599-608.
-
(1994)
Cell
, vol.77
, pp. 599-608
-
-
Kim, Y.J.1
Björklund, S.2
Li, Y.3
Sayre, M.H.4
Kornberg, R.D.5
-
10
-
-
0025347307
-
Phosphorylation of RNA polymerase IIA occurs subsequent to interaction with the promoter and before the initiation of transcription
-
Laybourn PJ, Dahmus ME (1990) Phosphorylation of RNA polymerase IIA occurs subsequent to interaction with the promoter and before the initiation of transcription. J Biol Chem 265:13165-13173.
-
(1990)
J Biol Chem
, vol.265
, pp. 13165-13173
-
-
Laybourn, P.J.1
Dahmus, M.E.2
-
11
-
-
0034307008
-
Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription
-
Komarnitsky P, Cho EJ, Buratowski S (2000) Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription. Genes Dev 14:2452-2460.
-
(2000)
Genes Dev
, vol.14
, pp. 2452-2460
-
-
Komarnitsky, P.1
Cho, E.J.2
Buratowski, S.3
-
12
-
-
0026348276
-
CTD kinase associated with yeast RNA polymerase II initiation factor b
-
Feaver WJ, Gileadi O, Li Y, Kornberg RD (1991) CTD kinase associated with yeast RNA polymerase II initiation factor b. Cell 67:1223-1230.
-
(1991)
Cell
, vol.67
, pp. 1223-1230
-
-
Feaver, W.J.1
Gileadi, O.2
Li, Y.3
Kornberg, R.D.4
-
13
-
-
34347273423
-
Hyperphosphorylation of the C-terminal repeat domain of RNA polymerase II facilitates dissociation of its complex with mediator
-
Soøgaard TM, Svejstrup JQ, Svejstrup JQ (2007) Hyperphosphorylation of the C-terminal repeat domain of RNA polymerase II facilitates dissociation of its complex with mediator. J Biol Chem 282:14113-14120.
-
(2007)
J Biol Chem
, vol.282
, pp. 14113-14120
-
-
Soøgaard, T.M.1
Svejstrup, J.Q.2
Svejstrup, J.Q.3
-
14
-
-
0030947346
-
Evidence for a mediator cycle at the initiation of transcription
-
Svejstrup JQ, et al. (1997) Evidence for a mediator cycle at the initiation of transcription. Proc Natl Acad Sci USA 94:6075-6078.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 6075-6078
-
-
Svejstrup, J.Q.1
-
15
-
-
79960442655
-
Structural insights to how mammalian capping enzyme reads the CTD code
-
Ghosh A, Shuman S, Lima CD (2011) Structural insights to how mammalian capping enzyme reads the CTD code. Mol Cell 43:299-310.
-
(2011)
Mol Cell
, vol.43
, pp. 299-310
-
-
Ghosh, A.1
Shuman, S.2
Lima, C.D.3
-
16
-
-
0029865796
-
A three-step pathway of transcription initiation leading to promoter clearance at an activation RNA polymerase II promoter
-
Jiang Y, Yan M, Gralla JD (1996) A three-step pathway of transcription initiation leading to promoter clearance at an activation RNA polymerase II promoter. Mol Cell Biol 16:1614-1621.
-
(1996)
Mol Cell Biol
, vol.16
, pp. 1614-1621
-
-
Jiang, Y.1
Yan, M.2
Gralla, J.D.3
-
17
-
-
0842347413
-
Two cyclin-dependent kinases promote RNA polymerase II transcription and formation of the scaffold complex
-
Liu Y, et al. (2004) Two cyclin-dependent kinases promote RNA polymerase II transcription and formation of the scaffold complex. Mol Cell Biol 24:1721-1735.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 1721-1735
-
-
Liu, Y.1
-
18
-
-
80555125095
-
RNAP II CTD phosphorylated on threonine-4 is required for histone mRNA 3′ end processing
-
Hsin JP, Sheth A, Manley JL (2011) RNAP II CTD phosphorylated on threonine-4 is required for histone mRNA 3′ end processing. Science 334:683-686.
-
(2011)
Science
, vol.334
, pp. 683-686
-
-
Hsin, J.P.1
Sheth, A.2
Manley, J.L.3
-
19
-
-
84862977456
-
CTD tyrosine phosphorylation impairs termination factor recruitment to RNA polymerase II
-
Mayer A, et al. (2012) CTD tyrosine phosphorylation impairs termination factor recruitment to RNA polymerase II. Science 336:1723-1725.
-
(2012)
Science
, vol.336
, pp. 1723-1725
-
-
Mayer, A.1
-
20
-
-
0038832859
-
Conserved structures of mediator and RNA polymerase II holoenzyme
-
Asturias FJ, Jiang YW, Myers LC, Gustafsson CM, Kornberg RD (1999) Conserved structures of mediator and RNA polymerase II holoenzyme. Science 283:985-987.
-
(1999)
Science
, vol.283
, pp. 985-987
-
-
Asturias, F.J.1
Jiang, Y.W.2
Myers, L.C.3
Gustafsson, C.M.4
Kornberg, R.D.5
-
21
-
-
0031881688
-
The Med proteins of yeast and their function through the RNA polymerase II carboxy-terminal domain
-
Myers LC, et al. (1998) The Med proteins of yeast and their function through the RNA polymerase II carboxy-terminal domain. Genes Dev 12:45-54.
-
(1998)
Genes Dev
, vol.12
, pp. 45-54
-
-
Myers, L.C.1
-
22
-
-
0035834772
-
The structural and functional organization of the yeast mediator complex
-
Kang JS, et al. (2001) The structural and functional organization of the yeast mediator complex. J Biol Chem 276:42003-42010.
-
(2001)
J Biol Chem
, vol.276
, pp. 42003-42010
-
-
Kang, J.S.1
-
23
-
-
79960434142
-
Architecture of the Mediator head module
-
Imasaki T, et al. (2011) Architecture of the Mediator head module. Nature 475:240-243.
-
(2011)
Nature
, vol.475
, pp. 240-243
-
-
Imasaki, T.1
-
24
-
-
76649135167
-
Finding chimeras: A bioinformatics strategy for identification of cross-linked peptides
-
Chu F, Baker PR, Burlingame AL, Chalkley RJ (2010) Finding chimeras: A bioinformatics strategy for identification of cross-linked peptides. Mol Cell Proteomics 9:25-31.
-
(2010)
Mol Cell Proteomics
, vol.9
, pp. 25-31
-
-
Chu, F.1
Baker, P.R.2
Burlingame, A.L.3
Chalkley, R.J.4
-
25
-
-
53049102663
-
Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the carboxyl-terminal domain of RNA polymerase II
-
Becker R, Loll B, Meinhart A (2008) Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the carboxyl-terminal domain of RNA polymerase II. J Biol Chem 283:22659-22669.
-
(2008)
J Biol Chem
, vol.283
, pp. 22659-22669
-
-
Becker, R.1
Loll, B.2
Meinhart, A.3
-
26
-
-
0033885803
-
Structural basis for phosphoserine- proline recognition by group IV WW domains
-
Verdecia MA, Bowman ME, Lu KP, Hunter T, Noel JP (2000) Structural basis for phosphoserine- proline recognition by group IV WW domains. Nat Struct Biol 7:639-643.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 639-643
-
-
Verdecia, M.A.1
Bowman, M.E.2
Lu, K.P.3
Hunter, T.4
Noel, J.P.5
-
27
-
-
0038094496
-
Structure of an mRNA capping enzyme bound to the phosphorylated carboxy-terminal domain of RNA polymerase II
-
Fabrega C, Shen V, Shuman S, Lima CD (2003) Structure of an mRNA capping enzyme bound to the phosphorylated carboxy-terminal domain of RNA polymerase II. Mol Cell 11:1549-1561.
-
(2003)
Mol Cell
, vol.11
, pp. 1549-1561
-
-
Fabrega, C.1
Shen, V.2
Shuman, S.3
Lima, C.D.4
-
28
-
-
0029037999
-
Construction and analysis of yeast RNA polymerase II CTD deletion and substitution mutations
-
West ML, Corden JL (1995) Construction and analysis of yeast RNA polymerase II CTD deletion and substitution mutations. Genetics 140:1223-1233.
-
(1995)
Genetics
, vol.140
, pp. 1223-1233
-
-
West, M.L.1
Corden, J.L.2
-
29
-
-
0032828715
-
A generic protein purification method for protein complex characterization and proteome exploration
-
Rigaut G, et al. (1999) A generic protein purification method for protein complex characterization and proteome exploration. Nat Biotechnol 17:1030-1032.
-
(1999)
Nat Biotechnol
, vol.17
, pp. 1030-1032
-
-
Rigaut, G.1
-
30
-
-
3242728442
-
A triad of subunits from the Gal11/tail domain of Srb mediator is an in vivo target of transcriptional activator Gcn4p
-
Zhang F, Sumibcay L, Hinnebusch AG, Swanson MJ (2004) A triad of subunits from the Gal11/tail domain of Srb mediator is an in vivo target of transcriptional activator Gcn4p. Mol Cell Biol 24:6871-6886.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 6871-6886
-
-
Zhang, F.1
Sumibcay, L.2
Hinnebusch, A.G.3
Swanson, M.J.4
-
31
-
-
0034841844
-
The tandem affinity purification (TAP) method: A general procedure of protein complex purification
-
Puig O, et al. (2001) The tandem affinity purification (TAP) method: A general procedure of protein complex purification. Methods 24:218-229.
-
(2001)
Methods
, vol.24
, pp. 218-229
-
-
Puig, O.1
-
32
-
-
0026581236
-
Isolation of two genes that encode subunits of the yeast transcription factor IIA
-
Ranish JA, Lane WS, Hahn S (1992) Isolation of two genes that encode subunits of the yeast transcription factor IIA. Science 255:1127-1129.
-
(1992)
Science
, vol.255
, pp. 1127-1129
-
-
Ranish, J.A.1
Lane, W.S.2
Hahn, S.3
-
33
-
-
74249102477
-
Structure of an RNA polymerase II-TFIIB complex and the transcription initiation mechanism
-
Liu X, Bushnell DA, Wang D, Calero G, Kornberg RD (2010) Structure of an RNA polymerase II-TFIIB complex and the transcription initiation mechanism. Science 327: 206-209.
-
(2010)
Science
, vol.327
, pp. 206-209
-
-
Liu, X.1
Bushnell, D.A.2
Wang, D.3
Calero, G.4
Kornberg, R.D.5
-
34
-
-
0035157217
-
Selenomethionine incorporation in Saccharomyces cerevisiae RNA polymerase II
-
Bushnell DA, Cramer P, Kornberg RD (2001) Selenomethionine incorporation in Saccharomyces cerevisiae RNA polymerase II. Structure 9:R11-R14.
-
(2001)
Structure
, vol.9
-
-
Bushnell, D.A.1
Cramer, P.2
Kornberg, R.D.3
-
35
-
-
0026452218
-
Reconstitution of transcription with five purified initiation factors and RNA polymerase II from Saccharomyces cerevisiae
-
Sayre MH, Tschochner H, Kornberg RD (1992) Reconstitution of transcription with five purified initiation factors and RNA polymerase II from Saccharomyces cerevisiae. J Biol Chem 267:23376-23382.
-
(1992)
J Biol Chem
, vol.267
, pp. 23376-23382
-
-
Sayre, M.H.1
Tschochner, H.2
Kornberg, R.D.3
-
36
-
-
33644852483
-
Mediator as a general transcription factor
-
Takagi Y, Kornberg RD (2006) Mediator as a general transcription factor. J Biol Chem 281:80-89.
-
(2006)
J Biol Chem
, vol.281
, pp. 80-89
-
-
Takagi, Y.1
Kornberg, R.D.2
-
37
-
-
77957975473
-
Topographic studies of the GroEL-GroES chaperonin complex by chemical cross-linking using diformyl ethynylbenzene: The power of high resolution electron transfer dissociation for determination of both peptide sequences and their attachment sites
-
Trnka MJ, Burlingame AL (2010) Topographic studies of the GroEL-GroES chaperonin complex by chemical cross-linking using diformyl ethynylbenzene: The power of high resolution electron transfer dissociation for determination of both peptide sequences and their attachment sites. Mol Cell Proteomics 9:2306-2317.
-
(2010)
Mol Cell Proteomics
, vol.9
, pp. 2306-2317
-
-
Trnka, M.J.1
Burlingame, A.L.2
|