Volatile organic compound analysis by ion molecule reaction mass spectrometry for Gram-positive bacteria differentiation

European Journal of Clinical Microbiology and Infectious Diseases

Volumn 31, Issue 11, 2012, Pages 3007-3013

  Dolch, M E ^a   Hornuss, C ^a   Klocke, C ^a   Praun, S ^b   Villinger, J ^b   Denzer, W ^c   Schelling, G ^a   Schubert, S ^d  

^a LUDWIG MAXIMILIANS UNIVERSITY   (Germany)

^b V and F Medical Development GmbH   (Austria)

^c UNIVERSITY OF OXFORD   (United Kingdom)

^d UNIVERSITY OF MUNICH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

VOLATILE ORGANIC COMPOUND;

ARTICLE; BACTERIUM CULTURE; BACTERIUM DETECTION; BACTERIUM ISOLATE; BLOOD CULTURE; CHEMICAL ANALYSIS; COLONY FORMING UNIT; ENTEROCOCCUS FAECALIS; ENTEROCOCCUS FAECIUM; FEASIBILITY STUDY; GRAM POSITIVE BACTERIUM; IN VITRO STUDY; ION MOLECULE REACTION MASS SPECTROMETRY; MASS SPECTROMETER; MASS SPECTROMETRY; MICROBIAL GROWTH; NONHUMAN; PRINCIPAL COMPONENT ANALYSIS; PRIORITY JOURNAL; SPECIES DIFFERENTIATION; SPECIES DOMINANCE; STAPHYLOCOCCUS AUREUS; STAPHYLOCOCCUS EPIDERMIDIS;

BACTERIOLOGICAL TECHNIQUES; GRAM-POSITIVE BACTERIA; MASS SPECTROMETRY; TIME FACTORS; VOLATILE ORGANIC COMPOUNDS;

EID: 84867994473     PISSN: 09349723     EISSN: 14354373     Source Type: Journal    
DOI: 10.1007/s10096-012-1654-2     Document Type: Article

References (28)

1. Angus DC, Linde-Zwirble WT, Lidicker J, Clermont G, Carcillo J, Pinsky MR (2001) Epidemiology of severe sepsis in the United States: analysis of incidence, outcome, and associated costs of care. Crit Care Med 29(7):1303-1310
2. Brun-Buisson C, Meshaka P, Pinton P, Vallet B; EPISEPSIS Study Group (2004) EPISEPSIS: a reappraisal of the epidemiology and outcome of severe sepsis in French intensive care units. Intensive Care Med 30(4):580-588
3. Engel C, Brunkhorst FM, Bone HG, Brunkhorst R, Gerlach H, Grond S, Gruendling M, Huhle G, Jaschinski U, John S, Mayer K, Oppert M, Olthoff D, Quintel M, Ragaller M, Rossaint R, Stuber F, Weiler N, Welte T, Bogatsch H, Hartog C, Loeffler M, Reinhart K (2007) Epidemiology of sepsis in Germany: results from a national prospective multicenter study. Intensive Care Med 33(4):606-618
4. Martin GS, Mannino DM, Eaton S, Moss M (2003) The epidemiology of sepsis in the United States from 1979 through 2000. N Engl J Med 348(16):1546-1554
5. Retamar P, Portillo MM, López-Prieto MD, Rodríguez- López F, de Cueto M, García MV, Gómez MJ, Del Arco A, Muñoz A, Sánchez-Porto A, Torres-Tortosa M, Martín-Aspas A, Arroyo A, García-Figueras C, Acosta F, Corzo JE, León-Ruiz L, Escobar-Lara T, Rodríguez-Baño J; SAEI/SAMPAC Bacteremia Group (2012) Impact of inadequate empirical therapy on the mortality of patients with bloodstream infections: a propensity score-based analysis. Antimicrob Agents Chemother 56(1):472-478
6. Kumar A, Ellis P, Arabi Y, Roberts D, Light B, Parrillo JE, Dodek P, Wood G, Kumar A, Simon D, Peters C, Ahsan M, Chateau D; Cooperative Antimicrobial Therapy of Septic Shock Database Research Group (2009) Initiation of inappropriate antimicrobial therapy results in a fivefold reduction of survival in human septic shock. Chest 136(5):1237-1248
7. Bassetti M, Ginocchio F, Giacobbe DR (2011) New approaches for empiric therapy in Gram-positive sepsis. Minerva Anestesiol 77(8):821-827
8. Schulz S, Dickschat JS (2007) Bacterial volatiles: the smell of small organisms. Nat Prod Rep 24(4):814-842
9. Mann S (1966) Über den Geruchsstoff von Pseudomonas aeruginosa. Arch Mikrobiol 54(2):184-190
10. Cox CD, Parker J (1979) Use of 2-aminoacetophenone production in identification of Pseudomonas aeruginosa. J Clin Microbiol 9(4):479-484
11. Labows JN, McGinley KJ, Webster GF, Leyden JJ (1980) Headspace analysis of volatile metabolites of Pseudomonas aeruginosa and related species by gas chromatography-mass spectrometry. J Clin Microbiol 12(4):521-526
12. Julák J, Stránská E, Procházková- Francisci E, Rosová V (2000) Blood cultures evaluation by gas chromatography of volatile fatty acids. Med Sci Monit 6(3):605-610
13. Probert CS, Jones PR, Ratcliffe NM (2004) A novel method for rapidly diagnosing the causes of diarrhoea. Gut 53(1):58-61
14. Allardyce RA, Langford VS, Hill AL, Murdoch DR (2006) Detection of volatile metabolites produced by bacterial growth in blood culture media by selected ion flow tube mass spectrometry (SIFT-MS). J Microbiol Methods 65(2):361-365
15. Bunge M, Araghipour N, Mikoviny T, Dunkl J, Schnitzhofer R, Hansel A, Schinner F, Wisthaler A, Margesin R, Märk TD (2008) On-line monitoring of microbial volatile metabolites by proton transfer reaction-mass spectrometry. Appl Environ Microbiol 74(7):2179-2186
16. Chippendale TW, Španěl P, Smith D (2011) Time-resolved selected ion flow tube mass spectrometric quantification of the volatile compounds generated by E. coli JM109 cultured in two different media. Rapid Commun Mass Spectrom 25(15):2163-2172
17. O'Hara M, Mayhew CA (2009) A preliminary comparison of volatile organic compounds in the headspace of cultures of Staphylococcus aureus grown in nutrient, dextrose and brain heart bovine broths measured using a proton transfer reaction mass spectrometer. J Breath Res 3(2):027001
18. Thorn RM, Reynolds DM, Greenman J (2011) Multivariate analysis of bacterial volatile compound profiles for discrimination between selected species and strains in vitro. J Microbiol Methods 84(2):258-264
19. Zhu J, Bean HD, Kuo YM, Hill JE (2010) Fast detection of volatile organic compounds from bacterial cultures by secondary electrospray ionization-mass spectrometry. J Clin Microbiol 48(12):4426-4431
20. Critchley A, Elliott TS, Harrison G, Mayhew CA, Thompson JM, Worthington T (2004) The proton transfer reaction mass spectrometer and its use in medical science: applications to drug assays and the monitoring of bacteria. Int J Mass Spectrom 239(2-3):235-241
21. 2-controlled alveolar gas monitoring. J Breath Res 2(3):037010
22. Hornuss C, Praun S, Villinger J, Dornauer A, Moehnle P, Dolch M, Weninger E, Chouker A, Feil C, Briegel J, Thiel M, Schelling G (2007) Real-time monitoring of propofol in expired air in humans undergoing total intravenous anesthesia. Anesthesiology 106(4):665-674
23. Netzer M, Millonig G, Osl M, Pfeifer B, Praun S, Villinger J, Vogel W, Baumgartner C (2009) A new ensemble-based algorithm for identifying breath gas marker candidates in liver disease using ion molecule reaction mass spectrometry. Bioinformatics 25(7):941-947
24. R Development Core Team (2010) R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0, http://www.R-project.org/.
25. Bruins M, Bos A, Petit PL, Eadie K, Rog A, Bos R, van Ramshorst GH, van Belkum A (2009) Device-independent, real-time identification of bacterial pathogens with a metal oxide-based olfactory sensor. Eur J Clin Microbiol Infect Dis 28(7):775-780
26. Scotter JM, Allardyce RA, Langford VS, Hill A, Murdoch DR (2006) The rapid evaluation of bacterial growth in blood cultures by selected ion flow tube-mass spectrometry (SIFT-MS) and comparison with the BacT/ALERT automated blood culture system. J Microbiol Methods 65(3):628-631
27. Schulz S, Fuhlendorff J, Reichenbach H (2004) Identification and synthesis of volatiles released by the myxobacterium Chondromyces crocatus. Tetrahedron 60(17):3863-3872
28. Amann A, Spanal P, Smith D (2007) Breath analysis: the approach towards clinical applications. Mini Rev Med Chem 7(2):115-129