메뉴 건너뛰기




Volumn 14, Issue 11, 2012, Pages 2901-2910

Biofilm shows spatially stratified metabolic responses to contaminant exposure

Author keywords

[No Author keywords available]

Indexed keywords

CHROMIC ACID; WATER;

EID: 84867989521     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/j.1462-2920.2012.02850.x     Document Type: Article
Times cited : (42)

References (46)
  • 2
    • 77956255668 scopus 로고    scopus 로고
    • Using non-invasive magnetic resonance imaging (MRI) to assess the reduction of Cr(VI) using a biofilm-palladium catalyst
    • Beauregard, D., Yong, P., Macaskie, L., and Johns, M. (2010) Using non-invasive magnetic resonance imaging (MRI) to assess the reduction of Cr(VI) using a biofilm-palladium catalyst. Biotechnol Bioeng 107: 11-20.
    • (2010) Biotechnol Bioeng , vol.107 , pp. 11-20
    • Beauregard, D.1    Yong, P.2    Macaskie, L.3    Johns, M.4
  • 3
    • 79960098417 scopus 로고    scopus 로고
    • Extracellular reduction of hexavalent chromium by cytochromes MtrC and OmcA of Shewanella oneidensis MR-1
    • Belchik, S.M., Kennedy, D.W., Dohnalkova, A.C., Wang, Y.M., Sevinc, P.C., Wu, H., etal. (2011) Extracellular reduction of hexavalent chromium by cytochromes MtrC and OmcA of Shewanella oneidensis MR-1. Appl Environ Microbiol 77: 4035-4041.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 4035-4041
    • Belchik, S.M.1    Kennedy, D.W.2    Dohnalkova, A.C.3    Wang, Y.M.4    Sevinc, P.C.5    Wu, H.6
  • 5
    • 76649144493 scopus 로고    scopus 로고
    • Metabolic differentiation in biofilms as indicated by carbon dioxide production rates
    • Bester, E., Kroukamp, O., Wolfaardt, G., Boonzaaier, L., and Liss, S. (2010) Metabolic differentiation in biofilms as indicated by carbon dioxide production rates. Appl Environ Microbiol 76: 1189-1197.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 1189-1197
    • Bester, E.1    Kroukamp, O.2    Wolfaardt, G.3    Boonzaaier, L.4    Liss, S.5
  • 7
  • 8
    • 9344269395 scopus 로고    scopus 로고
    • Self-generated diversity produces 'insurance effects' in biofilm communities
    • Boles, B., Thoendel, M., and Singh, P. (2004) Self-generated diversity produces 'insurance effects' in biofilm communities. Proc Natl Acad Sci USA 101: 16630-16635.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 16630-16635
    • Boles, B.1    Thoendel, M.2    Singh, P.3
  • 10
    • 79953277727 scopus 로고    scopus 로고
    • Extracellular polymeric substances from Shewanella sp. HRCR-1 biofilms: characterization by infrared spectroscopy and proteomics
    • Cao, B., Shi, L., Brown, R.N., Xiong, Y.J., Fredrickson, J.K., Romine, M.F., etal. (2011a) Extracellular polymeric substances from Shewanella sp. HRCR-1 biofilms: characterization by infrared spectroscopy and proteomics. Environ Microbiol 13: 1018-1031.
    • (2011) Environ Microbiol , vol.13 , pp. 1018-1031
    • Cao, B.1    Shi, L.2    Brown, R.N.3    Xiong, Y.J.4    Fredrickson, J.K.5    Romine, M.F.6
  • 11
    • 79959901624 scopus 로고    scopus 로고
    • Contribution of extracellular polymeric substances from Shewanella sp. HRCR-1 biofilms to U(VI) immobilization
    • Cao, B., Ahmed, B., Kennedy, D.W., Wang, Z.M., Shi, L., Marshall, M.J., etal. (2011b) Contribution of extracellular polymeric substances from Shewanella sp. HRCR-1 biofilms to U(VI) immobilization. Environ Sci Technol 45: 5483-5490.
    • (2011) Environ Sci Technol , vol.45 , pp. 5483-5490
    • Cao, B.1    Ahmed, B.2    Kennedy, D.W.3    Wang, Z.M.4    Shi, L.5    Marshall, M.J.6
  • 12
    • 69049089814 scopus 로고    scopus 로고
    • Interactions between uronic acids and chromium(III)
    • Cetin, Z., Kantar, C., and Alpaslan, M. (2009) Interactions between uronic acids and chromium(III). Environ Toxicol Chem 28: 1599-1608.
    • (2009) Environ Toxicol Chem , vol.28 , pp. 1599-1608
    • Cetin, Z.1    Kantar, C.2    Alpaslan, M.3
  • 14
    • 0032502811 scopus 로고    scopus 로고
    • The involvement of cell-to-cell signals in the development of a bacterial biofilm
    • Davies, D., Parsek, M., Pearson, J., Iglewski, B., Costerton, J., and Greenberg, E. (1998) The involvement of cell-to-cell signals in the development of a bacterial biofilm. Science 280: 295-298.
    • (1998) Science , vol.280 , pp. 295-298
    • Davies, D.1    Parsek, M.2    Pearson, J.3    Iglewski, B.4    Costerton, J.5    Greenberg, E.6
  • 16
    • 77950064082 scopus 로고    scopus 로고
    • Microtoming coupled to microarray analysis to evaluate the spatial metabolic status of Geobacter sulfurreducens biofilms
    • Franks, A., Nevin, K., Glaven, R., and Lovley, D. (2010) Microtoming coupled to microarray analysis to evaluate the spatial metabolic status of Geobacter sulfurreducens biofilms. ISME J 4: 509-519.
    • (2010) ISME J , vol.4 , pp. 509-519
    • Franks, A.1    Nevin, K.2    Glaven, R.3    Lovley, D.4
  • 17
    • 79959864043 scopus 로고    scopus 로고
    • Bacterial formation of extracellular U(VI) nanowires
    • Jiang, S., Kim, M.-G., Kim, S.-J., Suk, H., Lee, S., Noh, D., etal. (2011) Bacterial formation of extracellular U(VI) nanowires. Chem Commun 47: 8076-8078.
    • (2011) Chem Commun , vol.47 , pp. 8076-8078
    • Jiang, S.1    Kim, M.-G.2    Kim, S.-J.3    Suk, H.4    Lee, S.5    Noh, D.6
  • 18
    • 77956043616 scopus 로고    scopus 로고
    • Studies on uranium removal by the extracellular polysaccharide of a Pseudomonas aeruginosa strain
    • Kazy, S., Sar, P., and D'Souza, S. (2008) Studies on uranium removal by the extracellular polysaccharide of a Pseudomonas aeruginosa strain. Bioremediation J 12: 47-57.
    • (2008) Bioremediation J , vol.12 , pp. 47-57
    • Kazy, S.1    Sar, P.2    D'Souza, S.3
  • 19
    • 53249100199 scopus 로고    scopus 로고
    • Influence of uranium(VI) on the metabolic activity of stable multispecies biofilms studied by oxygen microsensors and fluorescence microscopy
    • Krawczyk-Barsch, E., Grossmann, K., Arnold, T., Hofmann, S., and Wobus, A. (2008) Influence of uranium(VI) on the metabolic activity of stable multispecies biofilms studied by oxygen microsensors and fluorescence microscopy. Geochim Cosmochim Acta 72: 5251-5265.
    • (2008) Geochim Cosmochim Acta , vol.72 , pp. 5251-5265
    • Krawczyk-Barsch, E.1    Grossmann, K.2    Arnold, T.3    Hofmann, S.4    Wobus, A.5
  • 22
    • 0026447749 scopus 로고
    • NMR imaging of hydrodynamics near microbially colonized surfaces
    • Lewandowski, Z., Altobelli, S., Majors, P., and Fukushima, E. (1992) NMR imaging of hydrodynamics near microbially colonized surfaces. Water Sci Technol 26: 577-584.
    • (1992) Water Sci Technol , vol.26 , pp. 577-584
    • Lewandowski, Z.1    Altobelli, S.2    Majors, P.3    Fukushima, E.4
  • 23
    • 0027341840 scopus 로고
    • NMR and microelectrode studies of hydrodynamics and kinetics in biofilms
    • Lewandowski, Z., Altobelli, S., and Fukushima, E. (1993) NMR and microelectrode studies of hydrodynamics and kinetics in biofilms. Biotechnol Prog 9: 40-45.
    • (1993) Biotechnol Prog , vol.9 , pp. 40-45
    • Lewandowski, Z.1    Altobelli, S.2    Fukushima, E.3
  • 24
    • 13244255197 scopus 로고    scopus 로고
    • Time course observation of nitrifying biofilm development using microelectrodes
    • Li, J., and Bishop, P. (2004) Time course observation of nitrifying biofilm development using microelectrodes. J Environ Eng Sci 3: 523-528.
    • (2004) J Environ Eng Sci , vol.3 , pp. 523-528
    • Li, J.1    Bishop, P.2
  • 25
    • 38949156935 scopus 로고    scopus 로고
    • Correlated biofilm imaging, transport and metabolism measurements via combined nuclear magnetic resonance and confocal microscopy
    • McLean, J., Ona, O., and Majors, P. (2008a) Correlated biofilm imaging, transport and metabolism measurements via combined nuclear magnetic resonance and confocal microscopy. ISME J 2: 121-131.
    • (2008) ISME J , vol.2 , pp. 121-131
    • McLean, J.1    Ona, O.2    Majors, P.3
  • 27
    • 28244496460 scopus 로고    scopus 로고
    • NMR methods for in-situ biofilm metabolism studies: spatial and temporal resolved measurements
    • Majors, P.D., McLean, J.S., Fredrickson, J.K., and Wind, R.A. (2005a) NMR methods for in-situ biofilm metabolism studies: spatial and temporal resolved measurements. Water Sci Technol 52: 7-12.
    • (2005) Water Sci Technol , vol.52 , pp. 7-12
    • Majors, P.D.1    McLean, J.S.2    Fredrickson, J.K.3    Wind, R.A.4
  • 29
    • 33747343634 scopus 로고    scopus 로고
    • c-Type cytochrome-dependent formation of U(IV) nanoparticles by Shewanella oneidensis
    • Marshall, M., Beliaev, A., Dohnalkova, A., Kennedy, D., Shi, L., Wang, Z., etal. (2006) c-Type cytochrome-dependent formation of U(IV) nanoparticles by Shewanella oneidensis. PLoS Biol 4: 1324-1333.
    • (2006) PLoS Biol , vol.4 , pp. 1324-1333
    • Marshall, M.1    Beliaev, A.2    Dohnalkova, A.3    Kennedy, D.4    Shi, L.5    Wang, Z.6
  • 30
    • 0034547593 scopus 로고    scopus 로고
    • Role of commensal relationships on the spatial structure of a surface-attached microbial consortium
    • Nielsen, A.T., Tolker-Nielsen, T., Barken, K.B., and Molin, S. (2000) Role of commensal relationships on the spatial structure of a surface-attached microbial consortium. Environ Microbiol 2: 59-68.
    • (2000) Environ Microbiol , vol.2 , pp. 59-68
    • Nielsen, A.T.1    Tolker-Nielsen, T.2    Barken, K.B.3    Molin, S.4
  • 31
    • 40549126258 scopus 로고    scopus 로고
    • Tolerance to the antimicrobial peptide colistin in Pseudomonas aeruginosa biofilms is linked to metabolically active cells, and depends on the pmr and mexAB-oprM genes
    • Pamp, S.J., Gjermansen, M., Johansen, H.K., and Tolker-Nielsen, T. (2008) Tolerance to the antimicrobial peptide colistin in Pseudomonas aeruginosa biofilms is linked to metabolically active cells, and depends on the pmr and mexAB-oprM genes. Mol Microbiol 68: 223-240.
    • (2008) Mol Microbiol , vol.68 , pp. 223-240
    • Pamp, S.J.1    Gjermansen, M.2    Johansen, H.K.3    Tolker-Nielsen, T.4
  • 32
    • 0024053538 scopus 로고
    • A constant-depth laboratory model film fermentor
    • Peters, A.C., and Wimpenny, J.W.T. (1988) A constant-depth laboratory model film fermentor. Biotechnol Bioeng 32: 263-270.
    • (1988) Biotechnol Bioeng , vol.32 , pp. 263-270
    • Peters, A.C.1    Wimpenny, J.W.T.2
  • 33
    • 49449116099 scopus 로고    scopus 로고
    • Magnetic resonance imaging of structure, diffusivity, and copper immobilization in a phototrophic biofilm
    • Phoenix, V., and Holmes, W. (2008) Magnetic resonance imaging of structure, diffusivity, and copper immobilization in a phototrophic biofilm. Appl Environ Microbiol 74: 4934-4943.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 4934-4943
    • Phoenix, V.1    Holmes, W.2
  • 34
    • 54749103194 scopus 로고    scopus 로고
    • Growing oral biofilms in a constant depth film fermenter (CDFF)
    • Pratten, J. (2007) Growing oral biofilms in a constant depth film fermenter (CDFF). Curr Protoc Microbiol 6: 1B.5.1-1B.5.18.
    • (2007) Curr Protoc Microbiol , vol.6
    • Pratten, J.1
  • 35
    • 0032486744 scopus 로고    scopus 로고
    • Microelectrode measurements of local mass transport rates in heterogeneous biofilms
    • Rasmussen, K., and Lewandowski, Z. (1998) Microelectrode measurements of local mass transport rates in heterogeneous biofilms. Biotechnol Bioeng 59: 302-309.
    • (1998) Biotechnol Bioeng , vol.59 , pp. 302-309
    • Rasmussen, K.1    Lewandowski, Z.2
  • 36
    • 77955675188 scopus 로고    scopus 로고
    • In situ effective diffusion coefficient profiles in live biofilms using pulsed-field gradient nuclear magnetic resonance
    • Renslow, R.S., Majors, P.D., McLean, J.S., Fredrickson, J.K., Ahmed, B., and Beyenal, H. (2010) In situ effective diffusion coefficient profiles in live biofilms using pulsed-field gradient nuclear magnetic resonance. Biotechnol Bioeng 106: 928-937.
    • (2010) Biotechnol Bioeng , vol.106 , pp. 928-937
    • Renslow, R.S.1    Majors, P.D.2    McLean, J.S.3    Fredrickson, J.K.4    Ahmed, B.5    Beyenal, H.6
  • 37
    • 77953175665 scopus 로고    scopus 로고
    • Spatiotemporal activity of the mshA gene system in Shewanella oneidensis MR-1 biofilms
    • Saville, R., Dieckmann, N., and Spormann, A. (2010) Spatiotemporal activity of the mshA gene system in Shewanella oneidensis MR-1 biofilms. FEMS Microbiol Lett 308: 76-83.
    • (2010) FEMS Microbiol Lett , vol.308 , pp. 76-83
    • Saville, R.1    Dieckmann, N.2    Spormann, A.3
  • 39
    • 33846561094 scopus 로고    scopus 로고
    • Anaerobic central metabolic pathways in Shewanella oneidensis MR-1 reinterpreted in the light of isotopic metabolite labeling
    • Tang, Y.J., Meadows, A.L., Kirby, J., and Keasling, J.D. (2007a) Anaerobic central metabolic pathways in Shewanella oneidensis MR-1 reinterpreted in the light of isotopic metabolite labeling. J Bacteriol 189: 894-901.
    • (2007) J Bacteriol , vol.189 , pp. 894-901
    • Tang, Y.J.1    Meadows, A.L.2    Kirby, J.3    Keasling, J.D.4
  • 40
    • 33846912964 scopus 로고    scopus 로고
    • Shewanella oneidensis MR-1 fluxome under various oxygen conditions
    • Tang, Y.J., Hwang, J.S., Wemmer, D.E., and Keasling, J.D. (2007b) Shewanella oneidensis MR-1 fluxome under various oxygen conditions. Appl Environ Microbiol 73: 718-729.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 718-729
    • Tang, Y.J.1    Hwang, J.S.2    Wemmer, D.E.3    Keasling, J.D.4
  • 41
    • 33751003257 scopus 로고    scopus 로고
    • Spatiometabolic stratification of Shewanella oneidensis biofilms
    • Teal, T., Lies, D., Wold, B., and Newman, D. (2006) Spatiometabolic stratification of Shewanella oneidensis biofilms. Appl Environ Microbiol 72: 7324-7330.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 7324-7330
    • Teal, T.1    Lies, D.2    Wold, B.3    Newman, D.4
  • 45
    • 0031804537 scopus 로고    scopus 로고
    • Stratification of microbial metabolic processes and redox potential change in an aerobic biofilm studied using microelectrodes
    • Yu, T., and Bishop, P. (1998) Stratification of microbial metabolic processes and redox potential change in an aerobic biofilm studied using microelectrodes. Water Sci Technol 37: 195-198.
    • (1998) Water Sci Technol , vol.37 , pp. 195-198
    • Yu, T.1    Bishop, P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.