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Volumn 4, Issue 156, 2012, Pages

Methylation subtypes and large-scale epigenetic alterations in gastric cancer

(19)  Zouridis, Hermioni a,j   Deng, Niantao a,b   Ivanova, Tatiana a   Zhu, Yansong a   Wong, Bernice c   Huang, Dan d   Wu, Yong Hui a,c   Wu, Yingting a,e   Tan, Iain Beehuat b,c   Liem, Natalia f   Gopalakrishnan, Veena a   Luo, Qin a   Wu, Jeanie c   Lee, Minghui c   Yong, Wei Peng f,g   Goh, Liang Kee a   Teh, Bin Tean a,c,d   Rozen, Steve a,h   Tan, Patrick a,c,f,i  


Author keywords

[No Author keywords available]

Indexed keywords

5 AZA 2' DEOXYCYTIDINE; CISPLATIN; DNA;

EID: 84867820420     PISSN: 19466234     EISSN: 19466242     Source Type: Journal    
DOI: 10.1126/scitranslmed.3004504     Document Type: Article
Times cited : (149)

References (54)
  • 2
    • 9544237136 scopus 로고    scopus 로고
    • Palliative chemotherapy for advanced gastric cancer
    • S. S. Wöhrer, M. Raderer, M. Hejna, Palliative chemotherapy for advanced gastric cancer. Ann. Oncol. 15, 1585-1595 (2004).
    • (2004) Ann. Oncol. , vol.15 , pp. 1585-1595
    • Wöhrer, S.S.1    Raderer, M.2    Hejna, M.3
  • 5
    • 0028169368 scopus 로고
    • P53 mutations and microsatellite instability in sporadic gastric cancer: When guardians fail
    • J. G. Strickler, J. Zheng, Q. Shu, L. J. Burgart, S. R. Alberts, D. Shibata, p53 mutations and microsatellite instability in sporadic gastric cancer: When guardians fail. Cancer Res. 54, 4750-4755 (1994).
    • (1994) Cancer Res. , vol.54 , pp. 4750-4755
    • Strickler, J.G.1    Zheng, J.2    Shu, Q.3    Burgart, L.J.4    Alberts, S.R.5    Shibata, D.6
  • 6
    • 8144230684 scopus 로고    scopus 로고
    • Genetic alterations in 102 primary gastric cancers by comparative genomic hybridization: Gain of 20q and loss of 18q are associated with tumor progression
    • Y. Kimura, T. Noguchi, K. Kawahara, K. Kashima, T. Daa, S. Yokoyama, Genetic alterations in 102 primary gastric cancers by comparative genomic hybridization: Gain of 20q and loss of 18q are associated with tumor progression. Mod. Pathol. 17, 1328-1337 (2004).
    • (2004) Mod. Pathol. , vol.17 , pp. 1328-1337
    • Kimura, Y.1    Noguchi, T.2    Kawahara, K.3    Kashima, K.4    Daa, T.5    Yokoyama, S.6
  • 7
    • 33847065486 scopus 로고    scopus 로고
    • The epigenomics of cancer
    • P. A. Jones, S. B. Baylin, The epigenomics of cancer. Cell 128, 683-692 (2007).
    • (2007) Cell , vol.128 , pp. 683-692
    • Jones, P.A.1    Baylin, S.B.2
  • 8
    • 0020699979 scopus 로고
    • Hypomethylation distinguishes genes of some human cancers from their normal counterparts
    • A. P. Feinberg, B. Vogelstein, Hypomethylation distinguishes genes of some human cancers from their normal counterparts. Nature 301, 89-92 (1983).
    • (1983) Nature , vol.301 , pp. 89-92
    • Feinberg, A.P.1    Vogelstein, B.2
  • 10
    • 33644825262 scopus 로고    scopus 로고
    • Global DNA demethylation in gastrointestinal cancer is age dependent and precedes genomic damage
    • K. Suzuki, I. Suzuki, A. Leodolter, S. Alonso, S. Horiuchi, K. Yamashita, M. Perucho, Global DNA demethylation in gastrointestinal cancer is age dependent and precedes genomic damage. Cancer Cell 9, 199-207 (2006).
    • (2006) Cancer Cell , vol.9 , pp. 199-207
    • Suzuki, K.1    Suzuki, I.2    Leodolter, A.3    Alonso, S.4    Horiuchi, S.5    Yamashita, K.6    Perucho, M.7
  • 11
    • 77958008996 scopus 로고    scopus 로고
    • CpG island hypermethylator phenotype in gastric carcinoma and its clinicopathological features
    • S. Y. Park, M. C. Kook, Y. W. Kim, N. Y. Cho, N. Jung, H. J. Kwon, T. Y. Kim, G. H. Kang, CpG island hypermethylator phenotype in gastric carcinoma and its clinicopathological features. Virchows Arch. 457, 415-422 (2010).
    • (2010) Virchows Arch. , vol.457 , pp. 415-422
    • Park, S.Y.1    Kook, M.C.2    Kim, Y.W.3    Cho, N.Y.4    Jung, N.5    Kwon, H.J.6    Kim, T.Y.7    Kang, G.H.8
  • 26
    • 56149086395 scopus 로고    scopus 로고
    • Overlapping gene expression profiles of cell migration and tumor invasion in human bladder cancer identify metallothionein 1E and nicotinamide N-methyltransferase as novel regulators of cell migration
    • Y. Wu, M. S. Siadaty, M. E. Berens, G. M. Hampton, D. Theodorescu, Overlapping gene expression profiles of cell migration and tumor invasion in human bladder cancer identify metallothionein 1E and nicotinamide N-methyltransferase as novel regulators of cell migration. Oncogene 27, 6679-6689 (2008).
    • (2008) Oncogene , vol.27 , pp. 6679-6689
    • Wu, Y.1    Siadaty, M.S.2    Berens, M.E.3    Hampton, G.M.4    Theodorescu, D.5
  • 29
    • 0037565368 scopus 로고    scopus 로고
    • Concurrent hypermethylation of gene promoters is associated with a MSI-H phenotype and diploidy in gastric carcinomas
    • Downloaded from stm.sciencemag.org on October 17
    • B. Carvalho, M. Pinto, L. Cirnes, C. Oliveira, J. C. Machado, G. Suriano, R. Hamelin, F. Carneiro, R. Seruca, Concurrent hypermethylation of gene promoters is associated with a MSI-H phenotype and diploidy in gastric carcinomas. Eur. J. Cancer 39, 1222-1227 (2003). Downloaded from stm.sciencemag.org on October 17, 2012
    • (2003) Eur. J. Cancer , vol.39 , pp. 1222-1227
    • Carvalho, B.1    Pinto, M.2    Cirnes, L.3    Oliveira, C.4    Machado, J.C.5    Suriano, G.6    Hamelin, R.7    Carneiro, F.8    Seruca, R.9
  • 31
    • 0242525122 scopus 로고    scopus 로고
    • DNA methylation of multiple genes in gastric carcinoma: Association with histological type and CpG island methylator phenotype
    • N. Oue, Y. Oshimo, H. Nakayama, R. Ito, K. Yoshida, K. Matsusaki, W. Yasui, DNA methylation of multiple genes in gastric carcinoma: Association with histological type and CpG island methylator phenotype. Cancer Sci. 94, 901-905 (2003).
    • (2003) Cancer Sci. , vol.94 , pp. 901-905
    • Oue, N.1    Oshimo, Y.2    Nakayama, H.3    Ito, R.4    Yoshida, K.5    Matsusaki, K.6    Yasui, W.7
  • 33
    • 33744975264 scopus 로고    scopus 로고
    • L2L: A simple tool for discovering the hidden significance in microarray expression data
    • J. C. Newman, A. M. Weiner, L2L: A simple tool for discovering the hidden significance in microarray expression data. Genome Biol. 6, R81 (2005).
    • (2005) Genome Biol. , vol.6
    • Newman, J.C.1    Weiner, A.M.2
  • 34
    • 42649112047 scopus 로고    scopus 로고
    • An embryonic stem cell-like gene expression signature in poorly differentiated aggressive human tumors
    • I. Ben-Porath, M. W. Thomson, V. J. Carey, R. Ge, G. W. Bell, A. Regev, R. A. Weinberg, An embryonic stem cell-like gene expression signature in poorly differentiated aggressive human tumors. Nat. Genet. 40, 499-507 (2008).
    • (2008) Nat. Genet. , vol.40 , pp. 499-507
    • Ben-Porath, I.1    Thomson, M.W.2    Carey, V.J.3    Ge, R.4    Bell, G.W.5    Regev, A.6    Weinberg, R.A.7
  • 35
    • 16244400457 scopus 로고    scopus 로고
    • FDA drug approval summary: Azacitidine (5-azacytidine, Vidaza) for injectable suspension
    • E. Kaminskas, A. T. Farrell, Y. C. Wang, R. Sridhara, R. Pazdur, FDA drug approval summary: Azacitidine (5-azacytidine, Vidaza) for injectable suspension. Oncologist 10, 176-182 (2005).
    • (2005) Oncologist , vol.10 , pp. 176-182
    • Kaminskas, E.1    Farrell, A.T.2    Wang, Y.C.3    Sridhara, R.4    Pazdur, R.5
  • 37
    • 0037118586 scopus 로고    scopus 로고
    • HOX gene clusters are hotspots of de novo methylation in CpG islands of human lung adenocarcinomas
    • M. Shiraishi, A. Sekiguchi, A. J. Oates, M. J. Terry, Y. Miyamoto, HOX gene clusters are hotspots of de novo methylation in CpG islands of human lung adenocarcinomas. Oncogene 21, 3659-3662 (2002).
    • (2002) Oncogene , vol.21 , pp. 3659-3662
    • Shiraishi, M.1    Sekiguchi, A.2    Oates, A.J.3    Terry, M.J.4    Miyamoto, Y.5
  • 40
    • 77951819378 scopus 로고    scopus 로고
    • Methylation of a single intronic CpG mediates expression silencing of the PMP24 gene in prostate cancer
    • X. Zhang, M. Wu, H. Xiao, M. T. Lee, L. Levin, Y. K. Leung, S. M. Ho, Methylation of a single intronic CpG mediates expression silencing of the PMP24 gene in prostate cancer. Prostate 70, 765-776 (2010).
    • (2010) Prostate , vol.70 , pp. 765-776
    • Zhang, X.1    Wu, M.2    Xiao, H.3    Lee, M.T.4    Levin, L.5    Leung, Y.K.6    Ho, S.M.7
  • 41
    • 33847070442 scopus 로고    scopus 로고
    • The role of chromatin during transcription
    • B. Li, M. Carey, J. L. Workman, The role of chromatin during transcription. Cell 128, 707-719 (2007).
    • (2007) Cell , vol.128 , pp. 707-719
    • Li, B.1    Carey, M.2    Workman, J.L.3
  • 44
    • 35548974227 scopus 로고    scopus 로고
    • Lack of association between CpG island methylator phenotype in human gastric cancers and methylation in their background non-cancerous gastric mucosae
    • S. Enomoto, T. Maekita, T. Tsukamoto, T. Nakajima, K. Nakazawa, M. Tatematsu, M. Ichinose, T. Ushijima, Lack of association between CpG island methylator phenotype in human gastric cancers and methylation in their background non-cancerous gastric mucosae. Cancer Sci . 98, 1853-1861 (2007).
    • (2007) Cancer Sci. , vol.98 , pp. 1853-1861
    • Enomoto, S.1    Maekita, T.2    Tsukamoto, T.3    Nakajima, T.4    Nakazawa, K.5    Tatematsu, M.6    Ichinose, M.7    Ushijima, T.8
  • 45
    • 84855495604 scopus 로고    scopus 로고
    • High CpG island methylator phenotype is associated with lymph node metastasis and prognosis in gastric cancer
    • H. Y. Chen, B. H. Zhu, C. H. Zhang, D. J. Yang, J. J. Peng, J. H. Chen, F. K. Liu, Y. L. He, High CpG island methylator phenotype is associated with lymph node metastasis and prognosis in gastric cancer. Cancer Sci. 103, 73-79 (2012).
    • (2012) Cancer Sci. , vol.103 , pp. 73-79
    • Chen, H.Y.1    Zhu, B.H.2    Zhang, C.H.3    Yang, D.J.4    Peng, J.J.5    Chen, J.H.6    Liu, F.K.7    He, Y.L.8
  • 47
    • 79961137937 scopus 로고    scopus 로고
    • The CpG island methylator phenotype may confer a survival benefit in patients with stage II or III colorectal carcinomas receiving fluoropyrimidine-based adjuvant chemotherapy
    • B. H. Min, J. M. Bae, E. J. Lee, H. S. Yu, Y. H. Kim, D. K. Chang, H. C. Kim, C. K. Park, S. H. Lee, K. M. Kim, G. H. Kang, The CpG island methylator phenotype may confer a survival benefit in patients with stage II or III colorectal carcinomas receiving fluoropyrimidine-based adjuvant chemotherapy. BMC Cancer 11, 344 (2011).
    • (2011) BMC Cancer , vol.11 , pp. 344
    • Min, B.H.1    Bae, J.M.2    Lee, E.J.3    Yu, H.S.4    Kim, Y.H.5    Chang, D.K.6    Kim, H.C.7    Park, C.K.8    Lee, S.H.9    Kim, K.M.10    Kang, G.H.11
  • 48
    • 79951670780 scopus 로고    scopus 로고
    • ALKBH3, a human AlkB homologue, contributes to cell survival in human non-small-cell lung cancer
    • M. Tasaki, K. Shimada, H. Kimura, K. Tsujikawa, N. Konishi, ALKBH3, a human AlkB homologue, contributes to cell survival in human non-small-cell lung cancer. Br. J. Cancer 104, 700-706 (2011).
    • (2011) Br. J. Cancer , vol.104 , pp. 700-706
    • Tasaki, M.1    Shimada, K.2    Kimura, H.3    Tsujikawa, K.4    Konishi, N.5
  • 49
    • 43449100079 scopus 로고    scopus 로고
    • Comparative genome profiling across subtypes of low-grade B-cell lymphoma identifies type-specific and common aberrations that target genes with a role in B-cell neoplasia
    • B. I. Ferreira, J. F. García, J. Suela, M. Mollejo, F. I. Camacho, A. Carro, S. Montes, M. A. Piris, J. C. Cigudosa, Comparative genome profiling across subtypes of low-grade B-cell lymphoma identifies type-specific and common aberrations that target genes with a role in B-cell neoplasia. Haematologica 93, 670-679 (2008).
    • (2008) Haematologica , vol.93 , pp. 670-679
    • Ferreira, B.I.1    García, J.F.2    Suela, J.3    Mollejo, M.4    Camacho, F.I.5    Carro, A.6    Montes, S.7    Piris, M.A.8    Cigudosa, J.C.9
  • 50
    • 77957350610 scopus 로고    scopus 로고
    • Identification of driver and passenger DNA methylation in cancer by epigenomic analysis
    • S. Kalari, G. P. Pfeifer, Identification of driver and passenger DNA methylation in cancer by epigenomic analysis. Adv. Genet. 70, 277-308 (2010).
    • (2010) Adv. Genet. , vol.70 , pp. 277-308
    • Kalari, S.1    Pfeifer, G.P.2
  • 51
    • 34047190317 scopus 로고    scopus 로고
    • Epigenetic field for cancerization
    • T. Ushijima, Epigenetic field for cancerization. J. Biochem. Mol. Biol. 40, 142-150 (2007).
    • (2007) J. Biochem. Mol. Biol. , vol.40 , pp. 142-150
    • Ushijima, T.1
  • 52
    • 3543105225 scopus 로고    scopus 로고
    • Circular binary segmentation for the analysis of array-based DNA copy number data
    • A. B. Olshen, E. S. Venkatraman, R. Lucito, M. Wigler, Circular binary segmentation for the analysis of array-based DNA copy number data. Biostatistics 5, 557-572 (2004).
    • (2004) Biostatistics , vol.5 , pp. 557-572
    • Olshen, A.B.1    Venkatraman, E.S.2    Lucito, R.3    Wigler, M.4
  • 53
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Y. Benjamini, Y. Hochberg, Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. R. Statist. Soc. B 57, 289-300 (1995).
    • (1995) J. R. Statist. Soc. B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.