메뉴 건너뛰기




Volumn 18, Issue 32, 2012, Pages 4404-4411

Comparison of bacterial quantities in left and right colon biopsies and faeces

Author keywords

Faeces; Gastrointestinal microbiota; Mucosa; Real time quantitative polymerase chain reaction; Sampling

Indexed keywords

DNA; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; RNA 16S;

EID: 84867706567     PISSN: 10079327     EISSN: 22192840     Source Type: Journal    
DOI: 10.3748/wjg.v18.i32.4404     Document Type: Article
Times cited : (49)

References (29)
  • 1
    • 0036300743 scopus 로고    scopus 로고
    • Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces
    • Zoetendal EG, von Wright A, Vilpponen-Salmela T, Ben-Amor K, Akkermans AD, de Vos WM. Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces. Appl Environ Microbiol 2002; 68: 3401-3407
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3401-3407
    • Zoetendal, E.G.1    von Wright, A.2    Vilpponen-Salmela, T.3    Ben-Amor, K.4    Akkermans, A.D.5    de Vos, W.M.6
  • 2
    • 77952771845 scopus 로고    scopus 로고
    • Quantitative assessment of the human gut microbiome using multitag pyrosequencing
    • Gillevet P, Sikaroodi M, Keshavarzian A, Mutlu EA. Quantitative assessment of the human gut microbiome using multitag pyrosequencing. Chem Biodivers 2010; 7: 1065-1075
    • (2010) Chem Biodivers , vol.7 , pp. 1065-1075
    • Gillevet, P.1    Sikaroodi, M.2    Keshavarzian, A.3    Mutlu, E.A.4
  • 3
    • 79952117762 scopus 로고    scopus 로고
    • Host-bacteria interactions in the intestine: Homeostasis to chronic inflammation
    • Barbosa T, Rescigno M. Host-bacteria interactions in the intestine: homeostasis to chronic inflammation. Wiley Interdiscip Rev Syst Biol Med 2010; 2: 80-97
    • (2010) Wiley Interdiscip Rev Syst Biol Med , vol.2 , pp. 80-97
    • Barbosa, T.1    Rescigno, M.2
  • 4
    • 79958056338 scopus 로고    scopus 로고
    • The host selects mucosal and luminal associations of coevolved gut microorganisms: A novel concept
    • Van den Abbeele P, Van de Wiele T, Verstraete W, Possemiers S. The host selects mucosal and luminal associations of coevolved gut microorganisms: a novel concept. FEMS Microbiol Rev 2011; 35: 681-704
    • (2011) FEMS Microbiol Rev , vol.35 , pp. 681-704
    • van den Abbeele, P.1    van de Wiele, T.2    Verstraete, W.3    Possemiers, S.4
  • 5
    • 80053057748 scopus 로고    scopus 로고
    • Pyrosequencing-based analysis of the mucosal microbiota in healthy individuals reveals ubiquitous bacterial groups and micro-heterogeneity
    • Hong PY, Croix JA, Greenberg E, Gaskins HR, Mackie RI. Pyrosequencing-based analysis of the mucosal microbiota in healthy individuals reveals ubiquitous bacterial groups and micro-heterogeneity. PLoS One 2011; 6: e25042
    • (2011) PLoS One , vol.6
    • Hong, P.Y.1    Croix, J.A.2    Greenberg, E.3    Gaskins, H.R.4    McKie, R.I.5
  • 7
    • 79960854386 scopus 로고    scopus 로고
    • Intestinal microbiota in healthy adults: Temporal analysis reveals individual and common core and relation to intestinal symptoms
    • Jalanka-Tuovinen J, Salonen A, Nikkilä J, Immonen O, Kekkonen R, Lahti L, Palva A, de Vos WM. Intestinal microbiota in healthy adults: temporal analysis reveals individual and common core and relation to intestinal symptoms. PLoS One 2011; 6: e23035
    • (2011) PLoS One , vol.6
    • Jalanka-Tuovinen, J.1    Salonen, A.2    Nikkilä, J.3    Immonen, O.4    Kekkonen, R.5    Lahti, L.6    Palva, A.7    de Vos, W.M.8
  • 8
    • 79960904343 scopus 로고    scopus 로고
    • Comparative analysis of Korean human gut microbiota by barcoded pyrosequencing
    • Nam YD, Jung MJ, Roh SW, Kim MS, Bae JW. Comparative analysis of Korean human gut microbiota by barcoded pyrosequencing. PLoS One 2011; 6: e22109
    • (2011) PLoS One , vol.6
    • Nam, Y.D.1    Jung, M.J.2    Roh, S.W.3    Kim, M.S.4    Bae, J.W.5
  • 15
    • 34547989132 scopus 로고    scopus 로고
    • Qualitative and quantitative analyses of the bifidobacterial microbiota in the colonic mucosa of patients with colorectal cancer, diverticulitis and inflammatory bowel disease
    • Gueimonde M, Ouwehand A, Huhtinen H, Salminen E, Salminen S. Qualitative and quantitative analyses of the bifidobacterial microbiota in the colonic mucosa of patients with colorectal cancer, diverticulitis and inflammatory bowel disease. World J Gastroenterol 2007; 13: 3985-3989
    • (2007) World J Gastroenterol , vol.13 , pp. 3985-3989
    • Gueimonde, M.1    Ouwehand, A.2    Huhtinen, H.3    Salminen, E.4    Salminen, S.5
  • 16
    • 9644268216 scopus 로고    scopus 로고
    • Development of an extensive set of 16S rDNA-targeted primers for quantification of pathogenic and indigenous bacteria in faecal samples by real-time PCR
    • Rinttilä T, Kassinen A, Malinen E, Krogius L, Palva A. Development of an extensive set of 16S rDNA-targeted primers for quantification of pathogenic and indigenous bacteria in faecal samples by real-time PCR. J Appl Microbiol 2004; 97: 1166-1177
    • (2004) J Appl Microbiol , vol.97 , pp. 1166-1177
    • Rinttilä, T.1    Kassinen, A.2    Malinen, E.3    Krogius, L.4    Palva, A.5
  • 19
    • 26444504934 scopus 로고    scopus 로고
    • Bacterial population analysis of human colon and terminal ileum biopsies with 16S rRNA-based fluorescent probes: Commensal bacteria live in suspension and have no direct contact with epithelial cells
    • van der Waaij LA, Harmsen HJ, Madjipour M, Kroese FG, Zwiers M, van Dullemen HM, de Boer NK, Welling GW, Jansen PL. Bacterial population analysis of human colon and terminal ileum biopsies with 16S rRNA-based fluorescent probes: commensal bacteria live in suspension and have no direct contact with epithelial cells. Inflamm Bowel Dis 2005; 11: 865-871
    • (2005) Inflamm Bowel Dis , vol.11 , pp. 865-871
    • van der Waaij, L.A.1    Harmsen, H.J.2    Madjipour, M.3    Kroese, F.G.4    Zwiers, M.5    van Dullemen, H.M.6    de Boer, N.K.7    Welling, G.W.8    Jansen, P.L.9
  • 22
    • 24144439785 scopus 로고    scopus 로고
    • In vitro effects on polydextrose by colonic bacteria and caco-2 cell cyclooxygenase gene expression
    • Mäkivuokko H, Nurmi J, Nurminen P, Stowell J, Rautonen N. In vitro effects on polydextrose by colonic bacteria and caco-2 cell cyclooxygenase gene expression. Nutr Cancer 2005; 52: 94-104
    • (2005) Nutr Cancer , vol.52 , pp. 94-104
    • Mäkivuokko, H.1    Nurmi, J.2    Nurminen, P.3    Stowell, J.4    Rautonen, N.5
  • 23
    • 10444226583 scopus 로고    scopus 로고
    • Use of 16S rRNA gene-targeted group-specific primers for real-time PCR analysis of predominant bacteria in human feces
    • Matsuki T, Watanabe K, Fujimoto J, Takada T, Tanaka R. Use of 16S rRNA gene-targeted group-specific primers for real-time PCR analysis of predominant bacteria in human feces. Appl Environ Microbiol 2004; 70: 7220-7228
    • (2004) Appl Environ Microbiol , vol.70 , pp. 7220-7228
    • Matsuki, T.1    Watanabe, K.2    Fujimoto, J.3    Takada, T.4    Tanaka, R.5
  • 24
    • 8744264007 scopus 로고    scopus 로고
    • Real-time PCR quantitation of clostridia in feces of autistic children
    • Song Y, Liu C, Finegold SM. Real-time PCR quantitation of clostridia in feces of autistic children. Appl Environ Microbiol 2004; 70: 6459-6465
    • (2004) Appl Environ Microbiol , vol.70 , pp. 6459-6465
    • Song, Y.1    Liu, C.2    Finegold, S.M.3
  • 25
    • 84862338872 scopus 로고    scopus 로고
    • Probiotic cheese containing Lactobacillus rhamnosus HN001 and Lactobacillus acidophilus NCFM® modifies subpopulations of fecal lactobacilli and Clostridium difficile in the elderly
    • Lahtinen SJ, Forssten S, Aakko J, Granlund L, Rautonen N, Salminen S, Viitanen M, Ouwehand AC. Probiotic cheese containing Lactobacillus rhamnosus HN001 and Lactobacillus acidophilus NCFM® modifies subpopulations of fecal lactobacilli and Clostridium difficile in the elderly. Age (Dordr) 2012; 34: 133-143
    • (2012) Age (Dordr) , vol.34 , pp. 133-143
    • Lahtinen, S.J.1    Forssten, S.2    Aakko, J.3    Granlund, L.4    Rautonen, N.5    Salminen, S.6    Viitanen, M.7    Ouwehand, A.C.8
  • 27
    • 33846136980 scopus 로고    scopus 로고
    • Sensitive quantitative detection of commensal bacteria by rRNAtargeted reverse transcription-PCR
    • Matsuda K, Tsuji H, Asahara T, Kado Y, Nomoto K. Sensitive quantitative detection of commensal bacteria by rRNAtargeted reverse transcription-PCR. Appl Environ Microbiol 2007; 73: 32-39
    • (2007) Appl Environ Microbiol , vol.73 , pp. 32-39
    • Matsuda, K.1    Tsuji, H.2    Asahara, T.3    Kado, Y.4    Nomoto, K.5
  • 28
    • 22644436623 scopus 로고    scopus 로고
    • Quantification of Escherichia coli by kinetic 5'-nuclease polymerase chain reaction (real-time PCR) oriented to sfmD gene
    • Kaclíková E, Pangallo D, Oravcová K, Drahovská H, Kuchta T. Quantification of Escherichia coli by kinetic 5'-nuclease polymerase chain reaction (real-time PCR) oriented to sfmD gene. Lett Appl Microbiol 2005; 41: 132-135
    • (2005) Lett Appl Microbiol , vol.41 , pp. 132-135
    • Kaclíková, E.1    Pangallo, D.2    Oravcová, K.3    Drahovská, H.4    Kuchta, T.5
  • 29
    • 0026704612 scopus 로고
    • Detection of Staphylococcus aureus by polymerase chain reaction amplification of the nuc gene
    • Brakstad OG, Aasbakk K, Maeland JA. Detection of Staphylococcus aureus by polymerase chain reaction amplification of the nuc gene. J Clin Microbiol 1992; 30: 1654-1660
    • (1992) J Clin Microbiol , vol.30 , pp. 1654-1660
    • Brakstad, O.G.1    Aasbakk, K.2    Maeland, J.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.