메뉴 건너뛰기




Volumn 7, Issue 10, 2012, Pages

Automatic Assignment of Prokaryotic Genes to Functional Categories Using Literature Profiling

Author keywords

[No Author keywords available]

Indexed keywords

ACCESS TO INFORMATION; ACCURACY; BACTERIAL GENE; BIOINFORMATICS; CLASSIFIER; CLIENT SERVER APPLICATION; GENE FUNCTION; GENETIC ANALYSIS; INTERNET; MEDICAL LITERATURE; MEDLINE; PREDICTION; PROKARYOTE; REVIEW; SEQUENCE HOMOLOGY;

EID: 84867569857     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0047436     Document Type: Review
Times cited : (6)

References (12)
  • 1
    • 25644458211 scopus 로고    scopus 로고
    • The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
    • Overbeek R, Begley T, Butler RM, Choudhuri JV, Chuang HY, et al. (2005) The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes. Nucleic Acids Res 33: 5691-5702.
    • (2005) Nucleic Acids Res , vol.33 , pp. 5691-5702
    • Overbeek, R.1    Begley, T.2    Butler, R.M.3    Choudhuri, J.V.4    Chuang, H.Y.5
  • 2
    • 79952705856 scopus 로고    scopus 로고
    • Mining high-throughput experimental data to link gene and function
    • Blaby-Haas CE, de Crécy-Lagard V, (2011) Mining high-throughput experimental data to link gene and function. Trends Biotechnol 29: 174-182.
    • (2011) Trends Biotechnol , vol.29 , pp. 174-182
    • Blaby-Haas, C.E.1    de Crécy-Lagard, V.2
  • 3
    • 77954611275 scopus 로고    scopus 로고
    • Using comparative genome analysis to identify problems in annotated microbial genomes
    • Poptsova MS, Gogarten JP, (2010) Using comparative genome analysis to identify problems in annotated microbial genomes. Microbiology 156: 1909-1917.
    • (2010) Microbiology , vol.156 , pp. 1909-1917
    • Poptsova, M.S.1    Gogarten, J.P.2
  • 4
    • 74549221383 scopus 로고    scopus 로고
    • Annotation error in public databases: misannotation of molecular function in enzyme superfamilies
    • Schnoes AM, Brown SD, Dodevski I, Babbitt PC, (2009) Annotation error in public databases: misannotation of molecular function in enzyme superfamilies. PLoS Comput Biol 5: e1000605.
    • (2009) PLoS Comput Biol , vol.5
    • Schnoes, A.M.1    Brown, S.D.2    Dodevski, I.3    Babbitt, P.C.4
  • 5
    • 33344465511 scopus 로고    scopus 로고
    • Biomedical language processing: what's beyond PubMed?
    • Hunter L, Cohen KB, (2006) Biomedical language processing: what's beyond PubMed? Mol Cell 21: 589-594.
    • (2006) Mol Cell , vol.21 , pp. 589-594
    • Hunter, L.1    Cohen, K.B.2
  • 6
    • 34249906427 scopus 로고    scopus 로고
    • Gene functional annotation by statistical analysis of biomedical articles
    • Theodosiou T, Angelis L, Vakali A, Thomopoulos GN, (2007) Gene functional annotation by statistical analysis of biomedical articles. Int J Med Inform 76: 601-613.
    • (2007) Int J Med Inform , vol.76 , pp. 601-613
    • Theodosiou, T.1    Angelis, L.2    Vakali, A.3    Thomopoulos, G.N.4
  • 7
    • 0036144742 scopus 로고    scopus 로고
    • Associating genes with gene ontology codes using a maximum entropy analysis of biomedical literature
    • Raychaudhuri S, Chang JT, Sutphin PD, Altman RB, (2002) Associating genes with gene ontology codes using a maximum entropy analysis of biomedical literature. Genome Res 12: 203-214.
    • (2002) Genome Res , vol.12 , pp. 203-214
    • Raychaudhuri, S.1    Chang, J.T.2    Sutphin, P.D.3    Altman, R.B.4
  • 8
    • 70349467761 scopus 로고    scopus 로고
    • Feature generation and representations for protein-protein interaction classification
    • Lan M, Tan CL, Su J, (2009) Feature generation and representations for protein-protein interaction classification. J Biomed Inform 42: 866-872.
    • (2009) J Biomed Inform , vol.42 , pp. 866-872
    • Lan, M.1    Tan, C.L.2    Su, J.3
  • 9
    • 0038017587 scopus 로고    scopus 로고
    • Mining microarray expression data by literature profiling
    • Chaussabel D, Sher A, (2002) Mining microarray expression data by literature profiling. Genome Biol 3: RESEARCH0055.
    • (2002) Genome Biol , vol.3
    • Chaussabel, D.1    Sher, A.2
  • 10
    • 33746633893 scopus 로고    scopus 로고
    • Gene expression in cortex and hippocampus during acute pneumococcal meningitis
    • Coimbra RS, Voisin V, de Saizieu AB, Lindberg RL, Wittwer M, et al. (2006) Gene expression in cortex and hippocampus during acute pneumococcal meningitis. BMC Biol 4: 15.
    • (2006) BMC Biol , vol.4 , pp. 15
    • Coimbra, R.S.1    Voisin, V.2    de Saizieu, A.B.3    Lindberg, R.L.4    Wittwer, M.5
  • 11
    • 78650810699 scopus 로고    scopus 로고
    • Disclosing ambiguous gene aliases by automatic literature profiling
    • Coimbra RS, Vanderwall DE, Oliveira GC, (2010) Disclosing ambiguous gene aliases by automatic literature profiling. BMC Genomics 11 (Suppl 5): S3.
    • (2010) BMC Genomics , vol.11 , Issue.SUPPL. 5
    • Coimbra, R.S.1    Vanderwall, D.E.2    Oliveira, G.C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.