메뉴 건너뛰기




Volumn 28, Issue 19, 2012, Pages 2509-2511

UniMoG-a unifying framework for genomic distance calculation: And sorting based on DCJ

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; BIOLOGICAL MODEL; BIOLOGY; COMPUTER INTERFACE; COMPUTER PROGRAM; GENOMICS; INTERNET; METHODOLOGY;

EID: 84867316116     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts440     Document Type: Article
Times cited : (35)

References (16)
  • 2
    • 33645990625 scopus 로고    scopus 로고
    • On sorting by translocations
    • Bergeron,A. et al. (2006a) On sorting by translocations. J. Comput. Biol., 13, 567-578.
    • (2006) J. Comput. Biol. , vol.13 , pp. 567-578
    • Bergeron, A.1
  • 3
    • 33750264868 scopus 로고    scopus 로고
    • Proceedings of WABI 2006. LNBI 4175. Springer Verlag, Heidelberg
    • Bergeron,A. et al. (2006b) A unifying view of genome rearrangements. In Proceedings of WABI 2006. LNBI 4175. Springer Verlag, Heidelberg, pp. 163-173.
    • (2006) A unifying view of genome rearrangements , pp. 163-173
    • Bergeron, A.1
  • 4
    • 77957561566 scopus 로고    scopus 로고
    • Balanced vertices in trees and a simpler algorithm to compute the genomic distance
    • Erdos,P.L. et al. (2011) Balanced vertices in trees and a simpler algorithm to compute the genomic distance. Appl. Math. Lett., 24, 82-86.
    • (2011) Appl. Math. Lett. , vol.24 , pp. 82-86
    • Erdos, P.L.1
  • 5
    • 0000320128 scopus 로고    scopus 로고
    • Polynomial-time algorithm for computing translocation distance between genomes
    • Hannenhalli,S. (1996) Polynomial-time algorithm for computing translocation distance between genomes. Discrete Appl. Math., 71, 137-151.
    • (1996) Discrete Appl. Math. , vol.71 , pp. 137-151
    • Hannenhalli, S.1
  • 6
    • 0029493079 scopus 로고
    • Transforming men into mice (polynomial algorithm for genomic distance problem)
    • IEEE Computer Society Press, Los Alamitos, CA
    • Hannenhalli,S. and Pevzner,P.A. (1995) Transforming men into mice (polynomial algorithm for genomic distance problem). In Proceedings of FOCS 1995. IEEE Computer Society Press, Los Alamitos, CA, pp. 581-592.
    • (1995) Proceedings of FOCS 1995 , pp. 581-592
    • Hannenhalli, S.1    Pevzner, P.A.2
  • 7
    • 0002856077 scopus 로고    scopus 로고
    • Transforming cabbage into turnip: polynomial algorithm for sorting signed permutations by reversals
    • Hannenhalli,S. and Pevzner,P.A. (1999) Transforming cabbage into turnip: polynomial algorithm for sorting signed permutations by reversals. J. ACM, 46, 1-27.
    • (1999) J. ACM , vol.46 , pp. 1-27
    • Hannenhalli, S.1    Pevzner, P.A.2
  • 8
    • 34447289460 scopus 로고    scopus 로고
    • Genome rearrangements: a correct algorithm for optimal capping
    • Jean,G. and Nikolski,M. (2007) Genome rearrangements: a correct algorithm for optimal capping. Inform. Process. Lett., 104, 14-20
    • Inform. Process. Lett. , vol.104 , pp. 14-20
    • Jean, G.1    Nikolski, M.2
  • 9
    • 80052639343 scopus 로고    scopus 로고
    • Restricted DCJ model: rearrangement problems with chromosome reincorporation
    • Kováč,J. et al. (2011) Restricted DCJ model: rearrangement problems with chromosome reincorporation. J. Comput. Biol., 18, 1231-1241.
    • (2011) J. Comput. Biol. , vol.18 , pp. 1231-1241
    • Kováč, J.1
  • 10
    • 46249101804 scopus 로고    scopus 로고
    • Estimating true evolutionary distances under the DCJ model
    • Lin,Y. and Moret,B.M.E. (2008) Estimating true evolutionary distances under the DCJ model. Bioinformatics, 24, 114-122.
    • (2008) Bioinformatics , vol.24 , pp. 114-122
    • Lin, Y.1    Moret, B.M.E.2
  • 11
    • 0037264074 scopus 로고    scopus 로고
    • Genome rearrangements in mammalian evolution: lessons from human and mouse genomes
    • Pevzner,P.A. and Tesler,G. (2003) Genome rearrangements in mammalian evolution: lessons from human and mouse genomes. Genome Res., 13, 37-45
    • (2003) Genome Res , vol.13 , pp. 37-45
    • Pevzner, P.A.1    Tesler, G.2
  • 12
    • 33846805665 scopus 로고    scopus 로고
    • Advances on sorting by reversals
    • Tannier,E. et al. (2007) Advances on sorting by reversals. Discrete Appl.Math., 155, 881-888.
    • (2007) Discrete Appl. Math. , vol.155 , pp. 881-888
    • Tannier, E.1
  • 13
    • 0038658640 scopus 로고    scopus 로고
    • Efficient algorithms for multichromosomal genome rearrangements
    • Tesler,G. (2002a) Efficient algorithms for multichromosomal genome rearrangements. J. Comput. Systems Sci., 65, 587-609.
    • (2002) J. Comput. Systems Sci. , vol.65 , pp. 587-609
    • Tesler, G.1
  • 14
    • 0036211065 scopus 로고    scopus 로고
    • GRIMM: genome rearrangements web server
    • Tesler,G. (2002b) GRIMM: genome rearrangements web server. Bioinformatics, 18, 492-493.
    • (2002) Bioinformatics , vol.18 , pp. 492-493
    • Tesler, G.1
  • 15
    • 24344500211 scopus 로고
    • The Chimpanzee Sequencing and Analysis ConsortiumInitial sequence of the chimpanzee genome and comparison with the human genome
    • The Chimpanzee Sequencing and Analysis ConsortiumInitial sequence of the chimpanzee genome and comparison with the human genome. Nature, 437, 69-87.
    • (1111) Nature , vol.437 , pp. 69-87
  • 16
    • 24044535485 scopus 로고    scopus 로고
    • Efficient sorting of genomic permutations by translocation, inversion and block interchange
    • Yancopoulos,S. et al. (2005) Efficient sorting of genomic permutations by translocation, inversion and block interchange. Bioinformatics, 21, 3340-3346.
    • (2005) Bioinformatics , vol.21 , pp. 3340-3346
    • Yancopoulos, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.