메뉴 건너뛰기




Volumn 22, Issue 10, 2012, Pages 1845-1854

Copy number variation leads to considerable diversity for B but not A haplotypes of the human KIR genes encoding NK cell receptors

Author keywords

[No Author keywords available]

Indexed keywords

NATURAL KILLER CELL RECEPTOR;

EID: 84867182170     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.137976.112     Document Type: Article
Times cited : (150)

References (32)
  • 1
    • 0036338150 scopus 로고    scopus 로고
    • Merlin - Rapid analysis of dense genetic maps using sparse gene flow trees
    • Abecasis GR, Cherny SS, Cookson WO, Cardon LR. 2002. Merlin - rapid analysis of dense genetic maps using sparse gene flow trees. Nat Genet 30: 97-101.
    • (2002) Nat Genet , vol.30 , pp. 97-101
    • Abecasis, G.R.1    Cherny, S.S.2    Cookson, W.O.3    Cardon, L.R.4
  • 2
    • 73249146908 scopus 로고    scopus 로고
    • Co-evolution of KIR2DL3 with HLA-C in a human population retaining minimal essential diversity of KIR and HLA class i ligands
    • Gendzekhadze K, Norman PJ, Abi-Rached L, Graef T, Moesta AK, Layrisse Z, Parham P. 2009. Co-evolution of KIR2DL3 with HLA-C in a human population retaining minimal essential diversity of KIR and HLA class I ligands. Proc Natl Acad Sci 106: 18692-18697.
    • (2009) Proc Natl Acad Sci , vol.106 , pp. 18692-18697
    • Gendzekhadze, K.1    Norman, P.J.2    Abi-Rached, L.3    Graef, T.4    Moesta, A.K.5    Layrisse, Z.6    Parham, P.7
  • 3
    • 0036375408 scopus 로고    scopus 로고
    • Some human KIR haplotypes contain two KIR2DL5 genes: KIR2DL5A and KIR2DL5B
    • DOI 10.1007/s00251-002-0476-2
    • Gomez-Lozano N, Gardiner CM, Parham P, Vilches C. 2002. Some human KIR haplotypes contain two KIR2DL5 genes: KIR2DL5A and KIR2DL5B. Immunogenetics 54: 314-319. (Pubitemid 34983949)
    • (2002) Immunogenetics , vol.54 , Issue.5 , pp. 314-319
    • Gomez-Lozano, N.1    Gardiner, C.M.2    Parham, P.3    Vilches, C.4
  • 4
    • 0037350401 scopus 로고    scopus 로고
    • Recognition of HLA-G by the NK cell receptor KIR2DL4 is not essential for human reproduction
    • DOI 10.1002/eji.200323741
    • Gomez-Lozano N, de Pablo R, Puente S, Vilches C. 2003. Recognition of HLA-G by the NK cell receptor KIR2DL4 is not essential for human reproduction. Eur J Immunol 33: 639-644. (Pubitemid 36367667)
    • (2003) European Journal of Immunology , vol.33 , Issue.3 , pp. 639-644
    • Gomez-Lozano, N.1    De Pablo, R.2    Puente, S.3    Vilches, C.4
  • 5
    • 12344251783 scopus 로고    scopus 로고
    • The silent KIR3DP1 gene (CD158c) is transcribed and might encode a secreted receptor in a minority of humans, in whom the KIR3DP1, KIR2DL4 and KIR3DL1/KIR3DS1 genes are duplicated
    • DOI 10.1002/eji.200425493
    • Gomez-LozanoN, Estefania E,Williams F,Halfpenny I, MiddletonD, Solis R, Vilches C. 2005. The silent KIR3DP1 gene (CD158c) is transcribed and might encode a secreted receptor in a minority of humans, in whom the KIR3DP1, KIR2DL4 and KIR3DL1/KIR3DS1 genes are duplicated. Eur J Immunol 35: 16-24. (Pubitemid 40123847)
    • (2005) European Journal of Immunology , vol.35 , Issue.1 , pp. 16-24
    • Gomez-Lozano, N.1    Estefania, E.2    Williams, F.3    Halfpenny, I.4    Middleton, D.5    Solis, R.6    Vilches, C.7
  • 8
    • 84855934406 scopus 로고    scopus 로고
    • Conserved KIR allele-level haplotypes are altered by microvariation in individuals with European ancestry
    • Hou L, Chen M, Ng J, Hurley CK. 2012. Conserved KIR allele-level haplotypes are altered by microvariation in individuals with European ancestry. Genes Immun 13: 47-58.
    • (2012) Genes Immun , vol.13 , pp. 47-58
    • Hou, L.1    Chen, M.2    Ng, J.3    Hurley, C.K.4
  • 9
    • 0036839601 scopus 로고    scopus 로고
    • Killer Ig-like receptor haplotype analysis by gene content: Evidence for genomic diversity with a minimum of six basic framework haplotypes, each with multiple subsets
    • Hsu KC, Liu XR, Selvakumar A, Mickelson E, O'Reilly RJ, Dupont B. 2002. Killer Ig-like receptor haplotype analysis by gene content: Evidence for genomic diversity with a minimum of six basic framework haplotypes, each with multiple subsets. J Immunol 169: 5118-5129. (Pubitemid 35217181)
    • (2002) Journal of Immunology , vol.169 , Issue.9 , pp. 5118-5129
    • Hsu, K.C.1    Liu, X.-R.2    Selvakumar, A.3    Mickelson, E.4    O'Reilly, R.J.5    Dupont, B.6
  • 10
    • 0036649022 scopus 로고    scopus 로고
    • Reciprocal crossover asymmetry and meiotic drive in a human recombination hot spot
    • Jeffreys AJ, Neumann R. 2002. Reciprocal crossover asymmetry and meiotic drive in a human recombination hot spot. Nat Genet 31: 267-271.
    • (2002) Nat Genet , vol.31 , pp. 267-271
    • Jeffreys, A.J.1    Neumann, R.2
  • 11
    • 0034795550 scopus 로고    scopus 로고
    • Intensely punctate meiotic recombination in the class II region of the major histocompatibility complex
    • DOI 10.1038/ng1001-217
    • Jeffreys AJ, Kauppi L, Neumann R. 2001. Intensely punctate meiotic recombination in the class II region of the major histocompatibility complex. Nat Genet 29: 217-222. (Pubitemid 32952662)
    • (2001) Nature Genetics , vol.29 , Issue.2 , pp. 217-222
    • Jeffreys, A.J.1    Kauppi, L.2    Neumann, R.3
  • 12
    • 33750723103 scopus 로고    scopus 로고
    • KIR and disease: A model system or system of models?
    • DOI 10.1111/j.1600-065X.2006.00459.x
    • Khakoo SI, Carrington M. 2006. KIR and disease: A model system or system of models? Immunol Rev 214: 186-201. (Pubitemid 44707911)
    • (2006) Immunological Reviews , vol.214 , Issue.1 , pp. 186-201
    • Khakoo, S.I.1    Carrington, M.2
  • 14
    • 38749115455 scopus 로고    scopus 로고
    • A Statistical Method for Predicting Classical HLA Alleles from SNP Data
    • DOI 10.1016/j.ajhg.2007.09.001, PII S0002929707000079
    • Leslie S, Donnelly P, McVean G. 2008. A statistical method for predicting classical HLA alleles from SNP data. Am J Hum Genet 82: 48-56. (Pubitemid 351726079)
    • (2008) American Journal of Human Genetics , vol.82 , Issue.1 , pp. 48-56
    • Leslie, S.1    Donnelly, P.2    McVean, G.3
  • 15
    • 57149115768 scopus 로고    scopus 로고
    • Genetic control of variegated KIR gene expression: Polymorphisms of the bi-directional KIR3DL1 promoter are associated with distinct frequencies of gene expression
    • doi: 10.1371/journal.pgen.1000254
    • Li H, Pascal V, Martin MP, Carrington M, Anderson SK. 2008. Genetic control of variegated KIR gene expression: Polymorphisms of the bi-directional KIR3DL1 promoter are associated with distinct frequencies of gene expression. PLoS Genet 4: e1000254. doi: 10.1371/journal.pgen.1000254.
    • (2008) PLoS Genet , vol.4
    • Li, H.1    Pascal, V.2    Martin, M.P.3    Carrington, M.4    Anderson, S.K.5
  • 16
    • 0034033130 scopus 로고    scopus 로고
    • The genomic organization and evolution of the natural killer immunoglobulin-like receptor (KIR) gene cluster
    • Martin AM, Freitas EM, Witt CS, Christiansen FT. 2000. The genomic organization and evolution of the natural killer immunoglobulin-like receptor (KIR) gene cluster. Immunogenetics 51: 268-280. (Pubitemid 30198881)
    • (2000) Immunogenetics , vol.51 , Issue.4-5 , pp. 268-280
    • Martin, A.M.1    Freitas, E.M.2    Witt, C.S.3    Christiansen, F.T.4
  • 18
    • 57749198434 scopus 로고    scopus 로고
    • KIR haplotypes defined by segregation analysis in 59 Centre d'Etude Polymorphisme Humain (CEPH) families
    • Martin MP, Single RM, Wilson MJ, Trowsdale J, Carrington M. 2008. KIR haplotypes defined by segregation analysis in 59 Centre d'Etude Polymorphisme Humain (CEPH) families. Immunogenetics 60: 767-774.
    • (2008) Immunogenetics , vol.60 , pp. 767-774
    • Martin, M.P.1    Single, R.M.2    Wilson, M.J.3    Trowsdale, J.4    Carrington, M.5
  • 22
    • 48349127046 scopus 로고    scopus 로고
    • Duplication, mutation and recombination of the human orphan gene KIR2DS3 contribute to the diversity of KIR haplotypes
    • Ordonez D, Meenagh A, Gomez-Lozano N, Castano J, Middleton D, Vilches C. 2008. Duplication, mutation and recombination of the human orphan gene KIR2DS3 contribute to the diversity of KIR haplotypes. Genes Immun 9: 431-437.
    • (2008) Genes Immun , vol.9 , pp. 431-437
    • Ordonez, D.1    Meenagh, A.2    Gomez-Lozano, N.3    Castano, J.4    Middleton, D.5    Vilches, C.6
  • 23
    • 80054875119 scopus 로고    scopus 로고
    • Molecular characterisation of KIR2DS2*005, a fusion gene associated with a shortened KIR haplotype
    • Ordonez D, Gomez-Lozano N, Rosales L, Vilches C. 2011. Molecular characterisation of KIR2DS2*005, a fusion gene associated with a shortened KIR haplotype. Genes Immun 12: 544-551.
    • (2011) Genes Immun , vol.12 , pp. 544-551
    • Ordonez, D.1    Gomez-Lozano, N.2    Rosales, L.3    Vilches, C.4
  • 24
    • 14944355535 scopus 로고    scopus 로고
    • MHC class I molecules and KIRS in human history, health and survival
    • DOI 10.1038/nri1570
    • Parham P. 2005. MHC class I molecules and KIRs in human history, health and survival. Nat Rev Immunol 5: 201-214. (Pubitemid 40364822)
    • (2005) Nature Reviews Immunology , vol.5 , Issue.3 , pp. 201-214
    • Parham, P.1
  • 25
    • 84856630729 scopus 로고    scopus 로고
    • Human-specific evolution of killer cell immunoglobulin-like receptor recognition of major histocompatibility complex class i molecules
    • Parham P, Norman PJ, Abi-Rached L, Guethlein LA. 2012. Human-specific evolution of killer cell immunoglobulin-like receptor recognition of major histocompatibility complex class I molecules. Philos Trans R Soc Lond B Biol Sci 367: 800-811.
    • (2012) Philos Trans R Soc Lond B Biol Sci , vol.367 , pp. 800-811
    • Parham, P.1    Norman, P.J.2    Abi-Rached, L.3    Guethlein, L.A.4
  • 26
    • 58149352547 scopus 로고    scopus 로고
    • Study protocol. A prospective cohort study of unselected primiparous women: The pregnancy outcome prediction study
    • doi: 10.1186/1471-2393-8-51
    • Pasupathy D, Dacey A, Cook E, Charnock-Jones DS, White IR, Smith GC. 2008. Study protocol. A prospective cohort study of unselected primiparous women: The pregnancy outcome prediction study. BMC Pregnancy Childbirth 8: 51. doi: 10.1186/1471-2393-8-51.
    • (2008) BMC Pregnancy Childbirth , vol.8 , pp. 51
    • Pasupathy, D.1    Dacey, A.2    Cook, E.3    Charnock-Jones, D.S.4    White, I.R.5    Smith, G.C.6
  • 28
    • 78650805748 scopus 로고    scopus 로고
    • Different patterns of evolution in the centromeric and telomeric regions of group A and B haplotypes of the human killer cell Ig-like receptor locus
    • doi: 10.1371/journal.pone.0015115
    • Pyo CW, Guethlein LA, Vu Q,Wang R, Abi-Rached L, Norman PJ, Marsh SG, Miller JS, Parham P, Geraghty DE. 2010. Different patterns of evolution in the centromeric and telomeric regions of group A and B haplotypes of the human killer cell Ig-like receptor locus. PLoS ONE 5: e15115. doi: 10.1371/journal.pone.0015115.
    • (2010) PLoS ONE , vol.5
    • Pyo, C.W.1    Guethlein, L.A.2    Vu, Q.3    Wang, R.4    Abi-Rached, L.5    Norman, P.J.6    Marsh, S.G.7    Miller, J.S.8    Parham, P.9    Geraghty, D.E.10
  • 30
    • 44949231424 scopus 로고    scopus 로고
    • T method
    • DOI 10.1038/nprot.2008.73, PII NPROT.2008.73
    • Schmittgen TD, Livak KJ. 2008. Analyzing real-time PCR data by the comparative C(T) method. Nat Protoc 3: 1101-1108. (Pubitemid 351818697)
    • (2008) Nature Protocols , vol.3 , Issue.6 , pp. 1101-1108
    • Schmittgen, T.D.1    Livak, K.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.