Staphylococcal pathogenicity island interference with helper phage reproduction is a paradigm of molecular parasitism

Proceedings of the National Academy of Sciences of the United States of America

Volumn 109, Issue 40, 2012, Pages 16300-16305

  Ram, Geeta ^a   Chen, John ^a   Kumar, Krishan ^a   Ross, Hope F ^a   Ubeda, Carles ^a,d   Damle, Priyadarshan K ^b   Lane, Kristin D ^b   Penad́es, José R ^c   Christie, Gail E ^b   Novick, Richard P ^a  

^a NEW YORK UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b VIRGINIA COMMONWEALTH UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c INSTITUTO DE BIOMEDICINA DE VALENCIA   (Spain)

^d Center for Advanced Research in Public Health   (Spain)

Author keywords

Capsid morphogenesis; Small terminase; Temperate phage

Indexed keywords

BACTERIAL DNA; MESSENGER RNA;

ARTICLE; BACTERIAL INFECTION; BACTERIAL STRAIN; BACTERIOPHAGE; DELETION MUTANT; ESCHERICHIA COLI; GENE EXPRESSION; HELPER PHAGE; HORIZONTAL GENE TRANSFER; MOLECULAR CLONING; NONHUMAN; PARASITISM; PATHOGENICITY ISLAND; PLASMID; PRIORITY JOURNAL; STAPHYLOCOCCUS; VIRION;

ANTIBIOSIS; CLONING, MOLECULAR; ESCHERICHIA COLI; GENE TRANSFER, HORIZONTAL; GENOMIC ISLANDS; MICROSCOPY, ELECTRON; REAL-TIME POLYMERASE CHAIN REACTION; STAPHYLOCOCCUS AUREUS; STAPHYLOCOCCUS PHAGES; TWO-HYBRID SYSTEM TECHNIQUES; VIRAL PLAQUE ASSAY; VIRUS REPLICATION;

MIRIDAE; POSIBACTERIA; STAPHYLOCOCCUS AUREUS;

EID: 84867049470     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1204615109     Document Type: Article

References (30)

1. Novick RP, Christie GE, Penadés JR (2010) The phage-related chromosomal islands of Gram-positive bacteria. Nat Rev Microbiol 8:541-551.
2. Úbeda C, et al. (2008) SaPI mutations affecting replication and transfer and enabling autonomous replication in the absence of helper phage. Mol Microbiol 67:493-503.
3. Tormo-Más MÁ, et al. (2010) Moonlighting bacteriophage proteins derepress staphylococcal pathogenicity islands. Nature 465:779-782.
4. Úbeda C, et al. (2003) Sip, an integrase protein with excision, circularization and integration activities, defines a new family of mobile Staphylococcus aureus pathogenicity islands. Mol Microbiol 49:193-210. (Pubitemid 36792014)
5. Maiques E, et al. (2007) Role of staphylococcal phage and SaPI integrase in intra- and interspecies SaPI transfer. J Bacteriol 189:5608-5616. (Pubitemid 47206407)
6. Úbeda C, Barry P, Penadés JR, Novick RP (2007) A pathogenicity island replicon in Staphylococcus aureus replicates as an unstable plasmid. Proc Natl Acad Sci USA 104: 14182-14188. (Pubitemid 350003287)
7. Úbeda C, Tormo-Más MÁ, Penadés JR, Novick RP (2012) Structure-function analysis of the SaPIbov1 replication origin in Staphylococcus aureus. Plasmid 67:183-190.
8. Ruzin A, Lindsay J, Novick RP (2001) Molecular genetics of SaPI1 - a mobile pathogenicity island in Staphylococcus aureus. Mol Microbiol 41:365-377. (Pubitemid 32730537)
9. Úbeda C, et al. (2009) Specificity of staphylococcal phage and SaPI DNA packaging as revealed by integrase and terminase mutations. Mol Microbiol 72:98-108.
10. Chen J, Novick RP (2009) Phage-mediated intergeneric transfer of toxin genes. Science 323:139-141.
11. Lindsay JA, Ruzin A, Ross HF, Kurepina N, Novick RP (1998) The gene for toxic shock toxin is carried by a family of mobile pathogenicity islands in Staphylococcus aureus. Mol Microbiol 29:527-543. (Pubitemid 28330786)
12. Poliakov A, et al. (2008) Capsid size determination by Staphylococcus aureus pathogenicity island SaPI1 involves specific incorporation of SaPI1 proteins into procapsids. J Mol Biol 380:465-475. (Pubitemid 351815133)
13. Damle PK, et al. (2012) The roles of SaPI1 proteins gp7 (CpmA) and gp6 (CpmB) in capsid size determination and helper phage interference. Virology.
14. Morrison TG, Malamy MH (1971) T7 translational control mechanisms and their inhibiton by F factors. Nat New Biol 231:37-41.
15. Catalano CE (2000) The terminase enzyme from bacteriophage lambda: A DNA-packaging machine. Cell Mol Life Sci 57:128-148.
16. Rao VB, FeissM (2008) The bacteriophage DNA packaging motor. Annu Rev Genet 42: 647-681.
17. Casjens SR (2011) The DNA-packaging nanomotor of tailed bacteriophages. Nat Rev Microbiol 9:647-657.
18. Marchler-Bauer A, et al. (2011) CDD: A Conserved Domain Database for the functional annotation of proteins. Nucleic Acids Res 39:225-229.
19. Christie GE, et al. (2010) The complete genomes of Staphylococcus aureus bacteriophages 80 and 80α - implications for the specificity of SaPI mobilization. Virology 407:381-390.
20. Ghisotti D, Zangrossi S, Sironi G (1983) An Escherichia coli gene required for bacteriophage P2-λ interference. J Virol 48:616-626. (Pubitemid 14232272)
21. Yasbin RE, Ganesan AT, Young FE (1974) Bacteriophage interference in Bacillus subtilis 168. J Virol 13:916-921.
22. Johnson G, Widner W, Xin WN, Feiss M (1991) Interference with phage λ development by the small subunit of the phage 21 terminase, gp1. J Bacteriol 173:2733-2738.
23. Enea V, Horiuchi K, Turgeon BG, Zinder ND (1977) Physical map of defective interfering particles of bacteriophage f1. J Mol Biol 111:395-414. (Pubitemid 8090355)
24. Barrangou R, et al. (2007) CRISPR provides acquired resistance against viruses in prokaryotes. Science 315:1709-1712. (Pubitemid 46515624)
25. Deveau H, Garneau JE, Moineau S (2010) CRISPR/Cas system and its role in phagebacteria interactions. Annu Rev Microbiol 64:475-493.
26. Novick RP (1991) Genetic systems in staphylococci. Methods Enzymol 204:587-636.
27. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular Cloning: A Laboratory Manual (Cold Spring Harbor Lab Press, Cold Spring Harbor, NY), 2nd Ed.
28. Raines RT, McCormick M, Van Oosbree TR, Mierendorf RC (2000) The S.Tag fusion system for protein puri fication. Methods Enzymol 326:362-376.
29. Arnaud M, Chastanet A, Débarbouillé M (2004) New vector for efficient allelic replacement in naturally nontransformable, low-GC-content, gram-positive bacteria. Appl Environ Microbiol 70:6887-6891. (Pubitemid 39518603)
30. Pattee PA (1966) Use of tetrazolium for improved resolution of bacteriophage plaques. J Bacteriol 92:787-788.