A Statistical Framework for Accurate Taxonomic Assignment of Metagenomic Sequencing Reads

PLoS ONE

Volumn 7, Issue 10, 2012, Pages

  Jiang, Hongmei ^a   An, Lingling ^b,c   Lin, Simon M ^d,e   Feng, Gang ^a   Qiu, Yuqing ^a  

^a NORTHWESTERN UNIVERSITY   (United States)

^b University of Arizona   (United States)

^c UNIVERSITY OF ARIZONA   (United States)

^d MARSHFIELD CLINIC   (United States)

^e UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ARTICLE; BACTERIUM IDENTIFICATION; COMPUTER SIMULATION; CONTROLLED STUDY; GENE ASSIGNMENT; GENETIC ALGORITHM; INTERNET; METAGENOMICS; NONHUMAN; POPULATION ABUNDANCE; PROBABILITY; SEQUENCE ALIGNMENT; SEQUENCE DATABASE; SPECIES DIFFERENCE; STATISTICAL ANALYSIS; STATISTICAL DISTRIBUTION; STATISTICAL MODEL; TAXONOMIC ASSIGNMENT OF METAGENOMIC SEQUENCING READS; TAXONOMIC RANK; TAXONOMY;

ALGORITHMS; CLASSIFICATION; COMPUTATIONAL BIOLOGY; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; METAGENOMICS; MODELS, GENETIC; SOFTWARE; SPECIES SPECIFICITY;

EID: 84867025864     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0046450     Document Type: Article

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