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Volumn 489, Issue 7417, 2012, Pages 585-589

Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae

Author keywords

[No Author keywords available]

Indexed keywords

ACYLTRANSFERASE; CLATHRIN; DETERGENT; MEMBRANE PROTEIN; MULTIPROTEIN COMPLEX; SACCHAROMYCES CEREVISIAE PROTEIN;

EID: 84866930696     PISSN: 00280836     EISSN: 14764687     Source Type: Journal    
DOI: 10.1038/nature11354     Document Type: Review
Times cited : (193)

References (37)
  • 2
    • 24744436626 scopus 로고    scopus 로고
    • Large-scale identification of yeast integral membrane protein interactions
    • Miller, J. P. et al. Large-scale identification of yeast integral membrane protein interactions. Proc. Natl Acad. Sci. USA 102, 12123-12128 (2005).
    • (2005) Proc. Natl Acad. Sci. USA , vol.102 , pp. 12123-12128
    • Miller, J.P.1
  • 3
    • 45849110261 scopus 로고    scopus 로고
    • An in vivo map of the yeast protein interactome
    • Tarassov, K. et al. An in vivo map of the yeast protein interactome. Science 320, 1465-1470 (2008).
    • (2008) Science , vol.320 , pp. 1465-1470
    • Tarassov, K.1
  • 4
    • 75649111192 scopus 로고    scopus 로고
    • The genetic landscape of a cell
    • Costanzo, M. et al. The genetic landscape of a cell. Science 327, 425-431 (2010).
    • (2010) Science , vol.327 , pp. 425-431
    • Costanzo, M.1
  • 5
    • 79952052352 scopus 로고    scopus 로고
    • IRefWeb: Interactive analysis of consolidated protein interaction data and their supporting evidence
    • Turner, B. et al. iRefWeb: interactive analysis of consolidated protein interaction data and their supporting evidence. Database (Oxford) 2010, baq023 (2010).
    • (2010) Database (Oxford) , vol.2010
    • Turner, B.1
  • 6
    • 33644555054 scopus 로고    scopus 로고
    • Proteome survey reveals modularity of the yeast cell machinery
    • Gavin, A. C. et al. Proteome survey reveals modularity of the yeast cell machinery. Nature 440, 631-636 (2006).
    • (2006) Nature , vol.440 , pp. 631-636
    • Gavin, A.C.1
  • 7
    • 33645453254 scopus 로고    scopus 로고
    • Global landscape of protein complexes in the yeast Saccharomyces cerevisiae
    • Krogan, N. J. et al. Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature 440, 637-643 (2006).
    • (2006) Nature , vol.440 , pp. 637-643
    • Krogan, N.J.1
  • 8
    • 0142215475 scopus 로고    scopus 로고
    • Global analysis of protein expression in yeast
    • Ghaemmaghami, S. et al. Global analysis of protein expression in yeast. Nature 425, 737-741 (2003).
    • (2003) Nature , vol.425 , pp. 737-741
    • Ghaemmaghami, S.1
  • 9
    • 67849086774 scopus 로고    scopus 로고
    • Systematic characterization of the protein interaction network and protein complexes in Saccharomyces cerevisiae using tandem affinity purification and mass spectrometry
    • Babu, M., Krogan, N. J., Awrey, D. E., Emili, A. & Greenblatt, J. F. Systematic characterization of the protein interaction network and protein complexes in Saccharomyces cerevisiae using tandem affinity purification and mass spectrometry. Methods Mol. Biol. 548, 187-207 (2009).
    • (2009) Methods Mol. Biol. , vol.548 , pp. 187-207
    • Babu, M.1    Krogan, N.J.2    Awrey, D.E.3    Emili, A.4    Greenblatt, J.F.5
  • 10
    • 34147121646 scopus 로고    scopus 로고
    • Toward a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae
    • Collins, S. R. et al. Toward a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae. Mol. Cell. Proteomics 6, 439-450 (2007).
    • (2007) Mol. Cell. Proteomics , vol.6 , pp. 439-450
    • Collins, S.R.1
  • 12
    • 55249096894 scopus 로고    scopus 로고
    • Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast
    • de Godoy, L. M. et al. Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast. Nature 455, 1251-1254 (2008).
    • (2008) Nature , vol.455 , pp. 1251-1254
    • De Godoy, L.M.1
  • 13
    • 75549086594 scopus 로고    scopus 로고
    • In Paranoid 7: New algorithms and tools for eukaryotic orthology analysis
    • Ostlund, G. et al. In Paranoid 7: new algorithms and tools for eukaryotic orthology analysis. Nucleic Acids Res. 38, D196-D203 (2010).
    • (2010) Nucleic Acids Res. , vol.38
    • Ostlund, G.1
  • 14
    • 33644875537 scopus 로고    scopus 로고
    • MIPS: Analysis and annotationofproteins from whole genomes in 2005
    • Mewes, H. W. et al. MIPS: analysis and annotationofproteins from whole genomes in 2005. Nucleic Acids Res. 34, D169-D172 (2006).
    • (2006) Nucleic Acids Res. , vol.34
    • Mewes, H.W.1
  • 15
    • 33847064282 scopus 로고    scopus 로고
    • Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae
    • Reguly, T. et al. Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae. J. Biol. 5, 11 (2006).
    • (2006) J. Biol. , vol.5 , pp. 11
    • Reguly, T.1
  • 16
    • 53349117774 scopus 로고    scopus 로고
    • High-quality binary protein interaction map of the yeast interactome network
    • Yu, H. et al. High-quality binary protein interaction map of the yeast interactome network. Science 322, 104-110 (2008).
    • (2008) Science , vol.322 , pp. 104-110
    • Yu, H.1
  • 17
    • 33947730844 scopus 로고    scopus 로고
    • Identifying functional modules in the physical interactome of Saccharomyces cerevisiae
    • Pu, S., Vlasblom, J., Emili, A., Greenblatt, J. & Wodak, S. J. Identifying functional modules in the physical interactome of Saccharomyces cerevisiae. Proteomics 7, 944-960 (2007).
    • (2007) Proteomics , vol.7 , pp. 944-960
    • Pu, S.1    Vlasblom, J.2    Emili, A.3    Greenblatt, J.4    Wodak, S.J.5
  • 18
    • 77954385031 scopus 로고    scopus 로고
    • A plasma-membrane E-MAP reveals links of the eisosome with sphingolipid metabolism and endosomal trafficking
    • Aguilar, P. S. et al. A plasma-membrane E-MAP reveals links of the eisosome with sphingolipid metabolism and endosomal trafficking. Nature Struct. Mol. Biol. 17, 901-908 (2010).
    • (2010) Nature Struct. Mol. Biol. , vol.17 , pp. 901-908
    • Aguilar, P.S.1
  • 19
    • 26844489762 scopus 로고    scopus 로고
    • Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile
    • Schuldiner, M. et al. Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile. Cell 123, 507-519 (2005).
    • (2005) Cell , vol.123 , pp. 507-519
    • Schuldiner, M.1
  • 20
    • 34147217542 scopus 로고    scopus 로고
    • Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map
    • Collins, S. R. et al. Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map. Nature 446, 806-810 (2007).
    • (2007) Nature , vol.446 , pp. 806-810
    • Collins, S.R.1
  • 21
    • 0036529479 scopus 로고    scopus 로고
    • An efficient algorithm for large-scale detection of protein families
    • Enright, A. J., Van Dongen, S. & Ouzounis, C. A. An efficient algorithm for large-scale detection of protein families. Nucleic Acids Res. 30, 1575-1584 (2002).
    • (2002) Nucleic Acids Res. , vol.30 , pp. 1575-1584
    • Enright, A.J.1    Van Dongen, S.2    Ouzounis, C.A.3
  • 22
    • 77953644638 scopus 로고    scopus 로고
    • MTORC1 signals from late endosomes: Taking a TOR of the endocytic system
    • Flinn, R. J. & Backer, J. M. mTORC1 signals from late endosomes: taking a TOR of the endocytic system. Cell Cycle 9, 1869-1870 (2010).
    • (2010) Cell Cycle , vol.9 , pp. 1869-1870
    • Flinn, R.J.1    Backer, J.M.2
  • 23
    • 34147167177 scopus 로고    scopus 로고
    • Mapping protein-protein interactions for the yeast ABC transporter Ycf1p by integrated split-ubiquitin membrane yeast two-hybrid analysis
    • Paumi, C. M. et al. Mapping protein-protein interactions for the yeast ABC transporter Ycf1p by integrated split-ubiquitin membrane yeast two-hybrid analysis. Mol. Cell 26, 15-25 (2007).
    • (2007) Mol. Cell , vol.26 , pp. 15-25
    • Paumi, C.M.1
  • 24
    • 77954710571 scopus 로고    scopus 로고
    • Efficient ER exit and vacuole targeting of yeast Sna2p require two tyrosine-based sorting motifs
    • Renard, H. F., Demaegd, D., Guerriat, B. & Morsomme, P. Efficient ER exit and vacuole targeting of yeast Sna2p require two tyrosine-based sorting motifs. Traffic 11, 931-946 (2010).
    • (2010) Traffic , vol.11 , pp. 931-946
    • Renard, H.F.1    Demaegd, D.2    Guerriat, B.3    Morsomme, P.4
  • 25
    • 0032845769 scopus 로고    scopus 로고
    • C-synergin: An EH domain-containing protein that interacts with c-adaptin
    • Page, L. J., Sowerby, P. J., Lui, W. W. & Robinson, M. S. c-synergin: an EH domain-containing protein that interacts with c-adaptin. J. Cell Biol. 146, 993-1004 (1999).
    • (1999) J. Cell Biol. , vol.146 , pp. 993-1004
    • Page, L.J.1    Sowerby, P.J.2    Lui, W.W.3    Robinson, M.S.4
  • 26
    • 78651290702 scopus 로고    scopus 로고
    • ModBase, a database of annotated comparative protein structure models, and associated resources
    • Pieper, U. et al. ModBase, a database of annotated comparative protein structure models, and associated resources. Nucleic Acids Res. 39, D465-D474 (2011).
    • (2011) Nucleic Acids Res. , vol.39
    • Pieper, U.1
  • 27
    • 0036329213 scopus 로고    scopus 로고
    • Emp47p and its close homolog Emp46p have a tyrosine-containing endoplasmic reticulum exit signal and function in glycoprotein secretion in Saccharomyces cerevisiae
    • Sato, K. & Nakano, A. Emp47p and its close homolog Emp46p have a tyrosine-containing endoplasmic reticulum exit signal and function in glycoprotein secretion in Saccharomyces cerevisiae. Mol. Biol. Cell 13, 2518-2532 (2002).
    • (2002) Mol. Biol. Cell , vol.13 , pp. 2518-2532
    • Sato, K.1    Nakano, A.2
  • 28
    • 0026041520 scopus 로고
    • Selection of secretory protein-encoding genes by fusion with PHO5 in Saccharomyces cerevisiae
    • Sidhu, R. S., Mathewes, S. & Bollon, A. P. Selection of secretory protein-encoding genes by fusion with PHO5 in Saccharomyces cerevisiae. Gene 107, 111-118 (1991).
    • (1991) Gene , vol.107 , pp. 111-118
    • Sidhu, R.S.1    Mathewes, S.2    Bollon, A.P.3
  • 29
    • 61849174315 scopus 로고    scopus 로고
    • Recent developments inthe understanding of the combined deficiency of FV and FVIII
    • Zhang, B. Recent developments inthe understanding of the combined deficiency of FV and FVIII. Br. J. Haematol. 145, 15-23 (2009).
    • (2009) Br. J. Haematol. , vol.145 , pp. 15-23
    • Zhang, B.1
  • 32
    • 79953845487 scopus 로고    scopus 로고
    • Systematic exploration of essential yeast gene function with temperature-sensitive mutants
    • Li, Z. et al. Systematic exploration of essential yeast gene function with temperature-sensitive mutants. Nature Biotechnol. 29, 361-367 (2011).
    • (2011) Nature Biotechnol. , vol.29 , pp. 361-367
    • Li, Z.1
  • 33
    • 28444478789 scopus 로고    scopus 로고
    • Biochemical and genetic analysis of the yeast proteome with a movable ORF collection
    • Gelperin, D. M. et al. Biochemical and genetic analysis of the yeast proteome with a movable ORF collection. Genes Dev. 19, 2816-2826 (2005).
    • (2005) Genes Dev. , vol.19 , pp. 2816-2826
    • Gelperin, D.M.1
  • 34
    • 0042838332 scopus 로고    scopus 로고
    • The yeasts Rho1p and Pkc1p regulate the transport of chitin synthase III (Chs3p) from internal stores to the plasma membrane
    • Valdivia, R. H. & Schekman, R. The yeasts Rho1p and Pkc1p regulate the transport of chitin synthase III (Chs3p) from internal stores to the plasma membrane. Proc. Natl Acad. Sci. USA 100, 10287-10292 (2003).
    • (2003) Proc. Natl Acad. Sci. USA , vol.100 , pp. 10287-10292
    • Valdivia, R.H.1    Schekman, R.2
  • 35
    • 33745623380 scopus 로고    scopus 로고
    • Palmitoylation bythe DHHC protein Pfa4 regulates the ERexit of Chs3
    • Lam, K. K. et al. Palmitoylation bythe DHHC protein Pfa4 regulates the ERexit of Chs3. J. Cell Biol. 174, 19-25 (2006).
    • (2006) J. Cell Biol. , vol.174 , pp. 19-25
    • Lam, K.K.1
  • 36
    • 0030455820 scopus 로고    scopus 로고
    • Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast
    • James, P., Halladay, J. & Craig, E. A. Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast. Genetics 144, 1425-1436 (1996).
    • (1996) Genetics , vol.144 , pp. 1425-1436
    • James, P.1    Halladay, J.2    Craig, E.A.3
  • 37
    • 77954249974 scopus 로고    scopus 로고
    • Detecting interactions with membrane proteins using a membrane two-hybrid assay in yeast
    • Snider, J. et al. Detecting interactions with membrane proteins using a membrane two-hybrid assay in yeast. Nature Protocols 5, 1281-1293 (2010).
    • (2010) Nature Protocols , vol.5 , pp. 1281-1293
    • Snider, J.1


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