-
1
-
-
48949109663
-
Why sex is good: On fungi and beyond
-
Heitman J, Taylor JW, Casselton LA, editors Washington, DC: ASM Press
-
Aanen DK, Hoekstra RF. 2007. Why sex is good: on fungi and beyond. In: Heitman J, Taylor JW, Casselton LA, editors. Sex in fungi: molecular determination and evolutionary implications. Washington, DC: ASM Press. p. 527-534.
-
(2007)
Sex in Fungi: Molecular Determination and Evolutionary Implications
, pp. 527-534
-
-
Aanen, D.K.1
Hoekstra, R.F.2
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul SF, Madden TL, Schaeffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402. (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0029186929
-
Skippy, a retrotransposon from the fungal plant pathogen Fusarium oxysporum
-
Anaya N, Roncero MIG. 1995. Skippy, a retrotransposon from the fungal plant pathogen Fusarium oxysporum. Mol Gen Genet. 249:637-647.
-
(1995)
Mol Gen Genet
, vol.249
, pp. 637-647
-
-
Anaya, N.1
Roncero, M.I.G.2
-
4
-
-
25844504316
-
Sex chromosome evolution: Molecular aspects of y chromosome degeneration in Drosophila
-
Bachtrog B. 2005. Sex chromosome evolution: molecular aspects of Y chromosome degeneration in Drosophila. Genome Res. 15: 1393-1401.
-
(2005)
Genome Res
, vol.15
, pp. 1393-1401
-
-
Bachtrog, B.1
-
5
-
-
0028121321
-
Molecular characterization of mating-type loci in selected homothallic species of Neurospora, Gelasinospora and Anixiella
-
Beatty NP, Smith ML, Glass LN. 1994. Molecular characterization of mating-type loci in selected homothallic species of Neurospora, Gelasinospora and Anixiella. Mycol Res. 98:1309-1316. (Pubitemid 2154078)
-
(1994)
Mycological Research
, vol.98
, Issue.11
, pp. 1309-1316
-
-
Beatty, N.P.1
Smith, M.L.2
Glass, N.L.3
-
6
-
-
0031865033
-
DAB1: A degenerate retrotransposon-like element from Neurospora crassa
-
DOI 10.1007/s004380050752
-
Bibbins M, Cummings NJ, Connerton IF. 1998. DAB1: a degenerate retrotransposon-like element from Neurospora crassa. Mol Gen Genet. 258:431-436. (Pubitemid 28279761)
-
(1998)
Molecular and General Genetics
, vol.258
, Issue.4
, pp. 431-436
-
-
Bibbins, M.1
Cummings, N.J.2
Connerton, I.F.3
-
7
-
-
0022409106
-
Association of crossover points with topoisomerase I cleavage sites: A model for nonhomologous recombination
-
Bullock P, Champoux JJ, Botchan M. 1985. Association of crossover points with topoisomerase-I cleavage sites-a model for nonhomologous recombination. Science 230:954-958. (Pubitemid 16193994)
-
(1985)
Science
, vol.230
, Issue.4728
, pp. 954-958
-
-
Bullock, P.1
Champoux, J.J.2
Botchan, M.3
-
8
-
-
33747348467
-
Evolutionary history of vegetative reproduction in Porpidia s. l. (lichen-forming ascomycota)
-
Buschbom J, Barker D. 2006. Evolutionary history of vegetative reproduction in Porpidia s. l. (lichen-forming ascomycota). Syst Biol. 55: 471-484.
-
(2006)
Syst Biol
, vol.55
, pp. 471-484
-
-
Buschbom, J.1
Barker, D.2
-
9
-
-
40149090884
-
The evolution of MAT: The Ascomycetes
-
Heitman J, Taylor JW, Casselton LA, editors Washington, DC: ASM Press
-
Butler G. 2007. The evolution of MAT: the Ascomycetes. In: Heitman J, Taylor JW, Casselton LA, editors. Sex in fungi: molecular determination and evolutionary implications. Washington, DC: ASM Press. p. 3-18.
-
(2007)
Sex in Fungi: Molecular Determination and Evolutionary Implications
, pp. 3-18
-
-
Butler, G.1
-
10
-
-
1242319544
-
Evolution of the MAT locus and its Ho endonuclease in yeast species
-
DOI 10.1073/pnas.0304170101
-
Butler G, Kenny C, Fagan A, Kurischko C, Gaillardin C, Wolfe KH. 2004. Evolution of the MAT locus and its Ho endonuclease in yeast species. Proc Natl Acad Sci USA. 101:1632-1637. (Pubitemid 38234206)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.6
, pp. 1632-1637
-
-
Butler, G.1
Kenny, C.2
Fagan, A.3
Kurischko, C.4
Gaillardin, C.5
Wolfe, K.H.6
-
11
-
-
38049057159
-
MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes
-
Cantarel BL, Korf I, Robb SM, Parra G, Ross E, Moore B, Holt C, Sanchez Alvarado A, Yandell M. 2008. MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes. Genome Res. 18:188-196.
-
(2008)
Genome Res
, vol.18
, pp. 188-196
-
-
Cantarel, B.L.1
Korf, I.2
Robb, S.M.3
Parra, G.4
Ross, E.5
Moore, B.6
Holt, C.7
Sanchez Alvarado, A.8
Yandell, M.9
-
12
-
-
77956193448
-
ProgressiveMauve: Multiple genome alignment with gene gain, loss and rearrangement
-
Darling AE, Mau B, Perna NT. 2010. progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement. PLoS One 5: e11147.
-
(2010)
PLoS One
, vol.5
-
-
Darling, A.E.1
Mau, B.2
Perna, N.T.3
-
14
-
-
33846084519
-
Mating-type structure, evolution, and function in Euascomycetes
-
Kues F, editor Heidelberg (Germany): Springer
-
Debuchy R, Turgeon BG. 2006. Mating-type structure, evolution, and function in Euascomycetes. In: Kues F, editor. The Mycota I: growth, differentiation and sexuality. Heidelberg (Germany): Springer. p. 293-323.
-
(2006)
The Mycota I: Growth, Differentiation and Sexuality
, pp. 293-323
-
-
Debuchy, R.1
Turgeon, B.G.2
-
15
-
-
0035573071
-
Ascospore morphology is a poor predictor of the phylogenetic relationships of Neurospora and Gelasinospora
-
DOI 10.1006/fgbi.2001.1289
-
Dettman JR, Harbinski FM, Taylor JW. 2001. Ascospore morphology is a poor predictor of the phylogenetic relationships of Neurospora and Gelasinospora. Fungal Genet Biol. 34:49-61. (Pubitemid 34235039)
-
(2001)
Fungal Genetics and Biology
, vol.34
, Issue.1
, pp. 49-61
-
-
Dettman, J.R.1
Harbinski, F.M.2
Taylor, J.W.3
-
16
-
-
0028855428
-
Boty, a long-terminal-repeat retroelement in the phytopathogenic fungus Botrytis cinerea
-
Diolez A, Marches F, Fortini D, Brygoo Y. 1995. Boty, a long-terminal-repeat retroelement in the phytopathogenic fungus Botrytis cinerea. Appl Environ Microbiol. 61:103-108.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 103-108
-
-
Diolez, A.1
Marches, F.2
Fortini, D.3
Brygoo, Y.4
-
17
-
-
47749121116
-
The limitations of ancestral state reconstruction and the evolution of the ascus in the Lecanorales (Lichenized ascomycota)
-
Ekman S, Andersen HL, Wedin M. 2008. The limitations of ancestral state reconstruction and the evolution of the ascus in the Lecanorales (Lichenized ascomycota). Syst Biol. 57:141-156.
-
(2008)
Syst Biol
, vol.57
, pp. 141-156
-
-
Ekman, S.1
Andersen, H.L.2
Wedin, M.3
-
18
-
-
39749179047
-
LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons
-
Ellinghaus D, Kurtz S, Willhoeft U. 2008. LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons. BMC Bioinformatics 9:18.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 18
-
-
Ellinghaus, D.1
Kurtz, S.2
Willhoeft, U.3
-
19
-
-
0037464589
-
The genome sequence of the filamentous fungus Neurospora crassa
-
DOI 10.1038/nature01554
-
Galagan JE, Calvo SE, Borkovich KA, et al. 2003. The genome sequence of the filamentous fungus Neurospora crassa. Nature 422: 859-868. (Pubitemid 36520034)
-
(2003)
Nature
, vol.422
, Issue.6934
, pp. 859-868
-
-
Galagan, J.E.1
Calvo, S.E.2
Borkovich, K.A.3
Selker, E.U.4
Read, N.O.5
Jaffe, D.6
FitzHugh, W.7
Ma, L.-J.8
Smirnov, S.9
Purcell, S.10
Rehman, B.11
Elkins, T.12
Engels, R.13
Wang, S.14
Nielsen, C.B.15
Butler, J.16
Endrizzi, M.17
Qui, D.18
Ianakiev, P.19
Bell-Pedersen, D.20
Nelson, M.A.21
Werner-Washburne, M.22
Selitrennikoff, C.P.23
Kinsey, J.A.24
Braun, E.L.25
Zelter, A.26
Schulte, U.27
Kothe, G.O.28
Jedd, G.29
Mewes, W.30
Staben, C.31
Marcotte, E.32
Greenberg, D.33
Roy, A.34
Foley, K.35
Naylor, J.36
Stange-Thomann, N.37
Barrett, R.38
Gnerre, S.39
Kamal, M.40
Kamvysselis, M.41
Mauceli, E.42
Bielke, C.43
Rudd, S.44
Frishman, D.45
Krystofova, S.46
Rasmussen, C.47
Metzenberg, R.L.48
Perkins, D.D.49
Kroken, S.50
Cogoni, C.51
Macino, G.52
Catcheside, D.53
Li, W.54
Pratt, R.J.55
Osmani, S.A.56
DeSouza, C.P.C.57
Glass, L.58
Orbach, M.J.59
Berglund, J.A.60
Voelker, R.61
Yarden, O.62
Plamann, M.63
Seiler, S.64
Dunlap, J.65
Radford, A.66
Aramayo, R.67
Natvig, D.O.68
Alex, L.A.69
Mannhaupt, G.70
Ebbole, D.J.71
Freitag, M.72
Paulsen, I.73
Sachs, M.S.74
Lander, E.S.75
Nusbaum, C.76
Birren, B.77
more..
-
20
-
-
28844461287
-
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae
-
DOI 10.1038/nature04341
-
Galagan JE, Calvo SE, Cuomo C, et al. 2005. Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature 438:1105-1115. (Pubitemid 41831674)
-
(2005)
Nature
, vol.438
, Issue.7071
, pp. 1105-1115
-
-
Galagan, J.E.1
Calvo, S.E.2
Cuomo, C.3
Ma, L.-J.4
Wortman, J.R.5
Batzoglou, S.6
Lee, S.-I.7
Basturkmen, M.8
Spevak, C.C.9
Clutterbuck, J.10
Kapitonov, V.11
Jurka, J.12
Scazzocchio, C.13
Farman, M.14
Butler, J.15
Purcell, S.16
Harris, S.17
Braus, G.H.18
Draht, O.19
Busch, S.20
D'Enfert, C.21
Bouchier, C.22
Goldman, G.H.23
Bell-Pedersen, D.24
Griffiths-Jones, S.25
Doonan, J.H.26
Yu, J.27
Vienken, K.28
Pain, A.29
Freitag, M.30
Selker, E.U.31
Archer, D.B.32
Penalva, M.A.33
Oakley, B.R.34
Momany, M.35
Tanaka, T.36
Kumagai, T.37
Asai, K.38
Machida, M.39
Nierman, W.C.40
Denning, D.W.41
Caddick, M.42
Hynes, M.43
Paoletti, M.44
Fischer, R.45
Miller, B.46
Dyer, P.47
Sachs, M.S.48
Osmani, S.A.49
Birren, B.W.50
more..
-
21
-
-
6344255038
-
A synopsis and re-circumscription of Neurospora (syn. Gelasinospora) based on ultrastructural and 28S rDNA sequence data
-
DOI 10.1017/S0953756204000218
-
Garcia D, Stchigel AM, Cano J, Guarro J, Hawksworth DL. 2004. A synopsis and re-circumscription of Neurospora (syn. Gelasinospora) based on ultrastructural and 28S rDNA sequence data. Mycol Res. 108:1119-1142. (Pubitemid 39384754)
-
(2004)
Mycological Research
, vol.108
, Issue.10
, pp. 1119-1142
-
-
Garcia, D.1
Stchigel, A.M.2
Cano, J.3
Guarro, J.4
Hawksworth, D.L.5
-
23
-
-
0025042830
-
Homothallic sordariaceae from nature: The absence of strains containing only the a mating type sequence
-
DOI 10.1016/0147-5975(90)90025-O
-
Glass NL, Metzenberg RL, Raju NB. 1990. Homothallic Sordariaceae from nature: the absence of strains containing only the a mating type sequence. Exp Mycol. 14:274-289. (Pubitemid 20303161)
-
(1990)
Experimental Mycology
, vol.14
, Issue.3
, pp. 274-289
-
-
Glass, N.L.1
Metzenberg, R.L.2
Raju, N.B.3
-
24
-
-
0028049553
-
Structure and function of a mating-type gene from the homothallic species Neurospora africana
-
Glass NL, Smith ML. 1994. Structure and function of a mating-type gene from the homothallic species Neurospora africana. Mol Gen Genet. 244:401-409. (Pubitemid 24266099)
-
(1994)
Molecular and General Genetics
, vol.244
, Issue.4
, pp. 401-409
-
-
Glass, N.L.1
Smith, M.L.2
-
25
-
-
0024299519
-
DNAs of the two mating-type alleles of Neurospora crassa are highly dissimilar
-
Glass NL, Vollmer SJ, Staben C, Grotelueschen J, Metzenberg RL, Yanofsky C. 1988. DNAs of the two mating-type alleles of Neurospora crassa are highly dissimilar. Science 241:570-573.
-
(1988)
Science
, vol.241
, pp. 570-573
-
-
Glass, N.L.1
Vollmer, S.J.2
Staben, C.3
Grotelueschen, J.4
Metzenberg, R.L.5
Yanofsky, C.6
-
26
-
-
65249092034
-
Recent speciation of Capsella rubella from Capsella grandiflora, associated with loss of self-incompatibility and an extreme bottleneck
-
Guo Y-L, Bechsgaard JS, Slotte T, Neuffer B, Lascoux M, Weigel D, Schierup MH. 2009. Recent speciation of Capsella rubella from Capsella grandiflora, associated with loss of self-incompatibility and an extreme bottleneck. Proc Natl Acad Sci USA. 106: 5246-5251.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 5246-5251
-
-
Guo, Y.-L.1
Bechsgaard, J.S.2
Slotte, T.3
Neuffer, B.4
Lascoux, M.5
Weigel, D.6
Schierup, M.H.7
-
28
-
-
79955476404
-
Nonconidiation in the new homothallic species, Neurospora terricola
-
Howe JHB, Page JE. 1963. Nonconidiation in the new homothallic species, Neurospora terricola. Neurospora Newsletter 4:7.
-
(1963)
Neurospora Newsletter
, vol.4
, pp. 7
-
-
Howe, J.H.B.1
Page, J.E.2
-
29
-
-
80055112148
-
Sex determination in the first-described sexual fungus
-
Idnurm A. 2011. Sex determination in the first-described sexual fungus. Eukaryotic Cell 10:1485-1491.
-
(2011)
Eukaryotic Cell
, vol.10
, pp. 1485-1491
-
-
Idnurm, A.1
-
30
-
-
23844507464
-
Lateral transfer of mating system in Stemphylium
-
DOI 10.1073/pnas.0501918102
-
Inderbitzin P, Harkness J, Turgeon BG, Berbee ML. 2005. Lateral transfer of mating system in Stemphylium. Proc Natl Acad Sci USA. 102: 11390-11395. (Pubitemid 41153830)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.32
, pp. 11390-11395
-
-
Inderbitzin, P.1
Harkness, J.2
Turgeon, B.G.3
Berbee, M.L.4
-
31
-
-
0003151910
-
The evolution of inbreeding in plants
-
Jain SK. 1976. The evolution of inbreeding in plants. Ann Rev Ecol Syst. 7: 469-495.
-
(1976)
Ann Rev Ecol Syst
, vol.7
, pp. 469-495
-
-
Jain, S.K.1
-
32
-
-
0033594243
-
Molecular identification of wood-inhabiting fungi in an unmanaged Picea abies forest in Sweden
-
DOI 10.1016/S0378-1127(98)00399-5, PII S0378112798003995
-
Johannesson H, Stenlid J. 1999. Molecular identification of wood-inhabiting fungi in an unmanaged Picea abies forest in Sweden. Forest Ecol Manag. 115:203-211. (Pubitemid 29130937)
-
(1999)
Forest Ecology and Management
, vol.115
, Issue.2-3
, pp. 203-211
-
-
Johannesson, H.1
Stenlid, J.2
-
33
-
-
23844525077
-
Repbase Update, a database of eukaryotic repetitive elements
-
DOI 10.1159/000084979
-
Jurka J, Kapitonov VV, Pavlicek A, Klonowski P, Kohany O, Walichiewicz J. 2005. Repbase Update, a database of eukaryotic repetitive elements. Cytogenet Genome Res. 110:462-467. (Pubitemid 41159923)
-
(2005)
Cytogenetic and Genome Research
, vol.110
, Issue.1-4
, pp. 462-467
-
-
Jurka, J.1
Kapitonov, V.V.2
Pavlicek, A.3
Klonowski, P.4
Kohany, O.5
Walichiewicz, J.6
-
34
-
-
84855286458
-
Interspecific sex in grass smuts and the genetic diversity of their pheromone-receptor system
-
Kellner R, Vollmeister E, Feldbrügge M, Begerow D. 2011. Interspecific sex in grass smuts and the genetic diversity of their pheromone-receptor system. PLoS Genet. 7:e1002436.
-
(2011)
PLoS Genet
, vol.7
-
-
Kellner, R.1
Vollmeister, E.2
Feldbrügge, M.3
Begerow, D.4
-
35
-
-
0031453252
-
Mating type in filamentous fungi
-
DOI 10.1146/annurev.genet.31.1.245
-
Kronstad JW, Staben C. 1997. Mating type in filamentous fungi. Ann Rev Genet. 31:245-276. (Pubitemid 28023708)
-
(1997)
Annual Review of Genetics
, vol.31
, pp. 245-276
-
-
Kronstad, J.W.1
Staben, C.2
-
36
-
-
0035056575
-
Self-incompatibility in the genus Arabidopsis: Characterization of the S locus in the outcrossing A. lyrata and its autogamous relative A. thaliana
-
DOI 10.1105/tpc.13.3.627
-
Kusaba M, Dwyer K, Hendershot J, Vrebalov J, Nasrallah JB, NasrallahME. 2001. Self-incompatibility in the genus Arabidopsis: characterization of the S locus in the outcrossing A. lyrata and its autogamous relative A. thaliana. Plant Cell 13:627-643. (Pubitemid 32265380)
-
(2001)
Plant Cell
, vol.13
, Issue.3
, pp. 627-643
-
-
Kusaba, M.1
Dwyer, K.2
Hendershot, J.3
Vrebalov, J.4
Nasrallah, J.B.5
Nasrallah, M.E.6
-
37
-
-
77952946376
-
The evolution of sex: A perspective from the fungal kingdom
-
Lee SC, Ni M, Li W, Shertz C, Heitman J. 2010. The evolution of sex: a perspective from the fungal kingdom. Microbiol Mol Biol Rev. 74: 298-340.
-
(2010)
Microbiol Mol Biol Rev
, vol.74
, pp. 298-340
-
-
Lee, S.C.1
Ni, M.2
Li, W.3
Shertz, C.4
Heitman, J.5
-
38
-
-
0036778017
-
Mating-type locus of Cryptococcus neoformans: A step in the evolution of sex chromosomes
-
DOI 10.1128/EC.1.5.704-718.2002
-
Lengeler KB, Fox DS, Fraser JA, Allen A, Forrester K, Dietrich FS, Heitman J. 2002. Mating-type locus of Cryptococcus neoformans: a step in the evolution of sex chromosomes. Eukaryot Cell 1:704-718. (Pubitemid 36557730)
-
(2002)
Eukaryotic Cell
, vol.1
, Issue.5
, pp. 704-718
-
-
Lengeler, K.B.1
Fox, D.S.2
Fraser, J.A.3
Allen, A.4
Forrester, K.5
Dietrich, F.S.6
Heitman, J.7
-
39
-
-
61949250367
-
Relics of repeat-induced point mutation direct heterochromatin formation in Neurospora crassa
-
Lewis ZA, Honda S, Khlafallah TK, Jeffress JK, Freitag M, Mohn F, Schuebeler D, Selker EU. 2009. Relics of repeat-induced point mutation direct heterochromatin formation in Neurospora crassa. Genome Res. 19:427-437.
-
(2009)
Genome Res
, vol.19
, pp. 427-437
-
-
Lewis, Z.A.1
Honda, S.2
Khlafallah, T.K.3
Jeffress, J.K.4
Freitag, M.5
Mohn, F.6
Schuebeler, D.7
Selker, E.U.8
-
40
-
-
75649124512
-
Organization and evolutionary trajectory of the mating type (MAT) locus in dermatophyte and dimorphic fungal pathogens
-
Li W, Metin B, White TC, Heitman J. 2010. Organization and evolutionary trajectory of the mating type (MAT) locus in dermatophyte and dimorphic fungal pathogens. Eukaryotic Cell 9:46-58.
-
(2010)
Eukaryotic Cell
, vol.9
, pp. 46-58
-
-
Li, W.1
Metin, B.2
White, T.C.3
Heitman, J.4
-
41
-
-
47049105943
-
Mechanisms of homothallism in fungi and transitions between heterothallism and homothallism
-
Heitman J, Taylor JW, Casselton LA, editors Washington, DC: ASM Press
-
Lin X, Heitman J. 2007. Mechanisms of homothallism in fungi and transitions between heterothallism and homothallism. In: Heitman J, Taylor JW, Casselton LA, editors. Sex in fungi: molecular determination and evolutionary implications. Washington, DC: ASM Press. p. 35-57.
-
(2007)
Sex in Fungi: Molecular Determination and Evolutionary Implications
, pp. 35-57
-
-
Lin, X.1
Heitman, J.2
-
42
-
-
0033057257
-
Modular evolution of the integrase domain in the Ty3/Gypsy class of LTR retrotransposons
-
Malik HS, Eickbush TH. 1999. Modular evolution of the integrase domain in the Ty3/Gypsy class of LTR retrotransposons. J Virol. 73:5186-5190. (Pubitemid 29246785)
-
(1999)
Journal of Virology
, vol.73
, Issue.6
, pp. 5186-5190
-
-
Malik, H.S.1
Eickbush, T.H.2
-
43
-
-
0343090765
-
Ty3/Gypsy retrotransposons: Description of new Arabidopsis thaliana elements and evolutionary perspectives derived from comparative genomic data
-
Marin I, Llorens C. 2000. Ty3/Gypsy retrotransposons: description of new Arabidopsis thaliana elements and evolutionary perspectives derived from comparative genomic data. Mol Biol Evol. 17: 1040-1049. (Pubitemid 30419217)
-
(2000)
Molecular Biology and Evolution
, vol.17
, Issue.7
, pp. 1040-1049
-
-
Marin, I.1
Llorens, C.2
-
44
-
-
0035910527
-
Long terminal repeats are used as alternative promoters for the endothelin B receptor and apolipoprotein C-I genes in humans
-
DOI 10.1074/jbc.M006557200
-
Medstrand P, Landry JR, Mager DL. 2001. Long terminal repeats are used as alternative promoters for the endothelin B receptor and apolipoprotein C-I genes in humans. J Biol Chem. 276:1896-1903. (Pubitemid 32109665)
-
(2001)
Journal of Biological Chemistry
, vol.276
, Issue.3
, pp. 1896-1903
-
-
Medstrand, P.1
Landry, J.-R.2
Mager, D.L.3
-
45
-
-
77953204250
-
The mating type locus (MAT) and sexual reproduction of Cryptococcus heveanensis: Insights into the evolution of sex and sex-determining chromosomal regions in fungi
-
Metin B, Findley K, Heitman J. 2010. The mating type locus (MAT) and sexual reproduction of Cryptococcus heveanensis: insights into the evolution of sex and sex-determining chromosomal regions in fungi. Plos Genet. 6(5):e1000961.
-
(2010)
Plos Genet.
, vol.6
, Issue.5
-
-
Metin, B.1
Findley, K.2
Heitman, J.3
-
46
-
-
33747882660
-
Recombination between retrotransposons as a source of chromosome rearrangements in the yeast Saccharomyces cerevisiae
-
DOI 10.1016/j.dnarep.2006.05.027, PII S1568786406001674, Mechanisms of Chromosomal Translocations
-
Mieczkowski PA, Lemoine FJ, Petes TD. 2006. Recombination between retrotransposons as a source of chromosome rearrangements in the yeast Saccharomyces cerevisiae. DNA Repair 5:1010-1020. (Pubitemid 44291618)
-
(2006)
DNA Repair
, vol.5
, Issue.9-10
, pp. 1010-1020
-
-
Mieczkowski, P.A.1
Lemoine, F.J.2
Petes, T.D.3
-
47
-
-
0035886538
-
Pyret, a Ty3/Gypsy retrotransposon in Magnaporthe grisea contains an extra domain between the nucleocapsid and protease domains
-
Nakayashiki H, Matsuo H, Chuma I, Ikeda K, Betsuyaku S, Kusaba M, Tosa Y, Mayama S. 2001. Pyret, a Ty3/Gypsy retrotransposon in Magnaporthe grisea contains an extra domain between the nucleocapsid and protease domains. Nucleic Acids Res. 29:4106-4113. (Pubitemid 33019554)
-
(2001)
Nucleic Acids Research
, vol.29
, Issue.20
, pp. 4106-4113
-
-
Nakayashiki, H.1
Matsuo, H.2
Chuma, I.3
Ikeda, K.4
Betsuyaku, S.5
Kusaba, M.6
Tosa, Y.7
Mayama, S.8
-
48
-
-
77952337288
-
De novo Assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis
-
Nowrousian M, Stajich JE, Chu M, et al. 2010. De novo Assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis. Plos Genet. 6(4): e1000891.
-
(2010)
Plos Genet.
, vol.6
, Issue.4
-
-
Nowrousian, M.1
Stajich, J.E.2
Chu, M.3
-
49
-
-
79955471591
-
A comprehensive phylogeny of Neurospora reveals a link between reproductive mode and molecular evolution in fungi
-
Nygren K, Strandberg R, Wallberg A, Nabholz B, Gustafsson T, Garcia D, Cano J, Guarro J, Johannesson H. 2011. A comprehensive phylogeny of Neurospora reveals a link between reproductive mode and molecular evolution in fungi. Mol Phylogenet Evol. 59:649-663.
-
(2011)
Mol Phylogenet Evol
, vol.59
, pp. 649-663
-
-
Nygren, K.1
Strandberg, R.2
Wallberg, A.3
Nabholz, B.4
Gustafsson, T.5
Garcia, D.6
Cano, J.7
Guarro, J.8
Johannesson, H.9
-
50
-
-
0023086165
-
Mating-type switching in filamentous ascomycetes
-
Perkins DD. 1987. Mating-type switching in filamentous ascomycetes. Genetics 115:215-216.
-
(1987)
Genetics
, vol.115
, pp. 215-216
-
-
Perkins, D.D.1
-
51
-
-
0032878010
-
Phylogenetic relationships between mating-type sequences from homothallic and heterothallic ascomycetes
-
DOI 10.1007/s002940050494
-
Poggeler S. 1999. Phylogenetic relationships between mating-type sequences from homothallic and heterothallic ascomycetes. Curr Genet. 36:222-231. (Pubitemid 29488216)
-
(1999)
Current Genetics
, vol.36
, Issue.4
, pp. 222-231
-
-
Poggeler, S.1
-
52
-
-
79959898334
-
Molecular organization of the mating-type loci in the homothallic Ascomycete Eupenicillium crustaceum
-
Poggeler S, O'Gorman CM, Hoff B, Kuck U. 2011. Molecular organization of the mating-type loci in the homothallic Ascomycete Eupenicillium crustaceum. Fungal Biol. 115:615-624.
-
(2011)
Fungal Biol
, vol.115
, pp. 615-624
-
-
Poggeler, S.1
O'Gorman, C.M.2
Hoff, B.3
Kuck, U.4
-
53
-
-
0030846843
-
Mating-type genes from the homothallic fungus Sordaria macrospora are functionally expressed in a heterothallic ascomycete
-
Poggeler S, Risch S, Kuck U, Osiewacz HD. 1997. Mating-type genes from the homothallic fungus Sordaria macrospora are functionally expressed in a heterothallic ascomycete. Genetics 147: 567-580. (Pubitemid 27418567)
-
(1997)
Genetics
, vol.147
, Issue.2
, pp. 567-580
-
-
Poggeler, S.1
Risch, S.2
Kuck, U.3
Osiewacz, H.D.4
-
54
-
-
0002978962
-
Meiotic nuclear behavior and ascospore formation in five homothallic species of Neurospora
-
Raju NB. 1978. Meiotic nuclear behavior and ascospore formation in five homothallic species of Neurospora. Can J Bot. 56:754-763.
-
(1978)
Can J Bot
, vol.56
, pp. 754-763
-
-
Raju, N.B.1
-
55
-
-
0031795137
-
The mating type locus of Neurospora crassa: Identification of an adjacent gene and characterization of transcripts surrounding the idiomorphs
-
DOI 10.1007/s004380050855
-
Randall TA, Metzenberg RL. 1998. The mating type locus of Neurospora crassa: identification of an adjacent gene and characterization of transcripts surrounding the idiomorphs. Mol Gen Genet. 259(6): 615-21. (Pubitemid 28499405)
-
(1998)
Molecular and General Genetics
, vol.259
, Issue.6
, pp. 615-621
-
-
Randall, T.A.1
Metzenberg, R.L.2
-
56
-
-
50349095793
-
Characterization and population analysis of the mating-type genes in Aspergillus flavus and Aspergillus parasiticus
-
Ramirez-Prado JH, Moore GG, Horn BW, Carbone I. 2008. Characterization and population analysis of the mating-type genes in Aspergillus flavus and Aspergillus parasiticus. Fungal Genet Biol. 45: 1292-1299.
-
(2008)
Fungal Genet Biol
, vol.45
, pp. 1292-1299
-
-
Ramirez-Prado, J.H.1
Moore, G.G.2
Horn, B.W.3
Carbone, I.4
-
57
-
-
0033990048
-
Primer 3 on the WWW for general users and for biologist programmers
-
Krawetz S, Misener S, editors Totowa, NJ: Humana Press
-
Rozen S, Skaletsky HJ. 2000. Primer 3 on the WWW for general users and for biologist programmers. In: Krawetz S, Misener S, editors. Bioinformatics methods and protocols: methods in molecular biology. Totowa, NJ: Humana Press. p. 365-386.
-
(2000)
Bioinformatics Methods and Protocols: Methods in Molecular Biology
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.J.2
-
58
-
-
0033635022
-
Artemis: Sequence visualization and annotation
-
Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, Rajandream MA, Barrell B. 2000. Artemis: sequence visualization and annotation. Bioinformatics 16:944-945.
-
(2000)
Bioinformatics
, vol.16
, pp. 944-945
-
-
Rutherford, K.1
Parkhill, J.2
Crook, J.3
Horsnell, T.4
Rice, P.5
Rajandream, M.A.6
Barrell, B.7
-
59
-
-
34249682649
-
DNA sequence characterization and molecular evolution of MAT1 and MAT2 mating-type loci of the self-compatible ascomycete mold Neosartorya fischeri
-
DOI 10.1128/EC.00319-06
-
Rydholm C, Dyer PS, Lutzoni F. 2007. DNA sequence characterization and molecular evolution of MAT1 and MAT2 mating-type loci of the self-compatible ascomycete mold Neosartorya fischeri. Eukaryotic Cell 6:868-874. (Pubitemid 46835049)
-
(2007)
Eukaryotic Cell
, vol.6
, Issue.5
, pp. 868-874
-
-
Rydholm, C.1
Dyer, P.S.2
Lutzoni, F.3
-
60
-
-
0042831010
-
Hairpin RNAs and retrotransposon LTRs effect RNAi and chromatin-based gene silencing
-
DOI 10.1126/science.1086870
-
Schramke V, Allshire R. 2003. Hairpin RNAs and retrotransposon LTRs effect RNAi and chromatin-based gene silencing. Science 301: 1069-1074. (Pubitemid 37022303)
-
(2003)
Science
, vol.301
, Issue.5636
, pp. 1069-1074
-
-
Schramke, V.1
Allshire, R.2
-
61
-
-
0025641736
-
Premeiotic instability of repeated sequences in Neurospora crassa
-
Selker EU. 1990. Premeiotic instability of repeated sequences in Neurospora crassa. Ann Rev Genet. 24:579-613. (Pubitemid 120011560)
-
(1990)
Annual Review of Genetics
, vol.24
, Issue.1
, pp. 579-613
-
-
Selker, E.U.1
-
62
-
-
79951765639
-
Neurospora
-
Selker EU. 2011. Neurospora. Curr Biol. 21:R139-R140.
-
(2011)
Curr Biol
, vol.21
-
-
Selker, E.U.1
-
63
-
-
0034031111
-
Cell and nuclear recognition mechanisms mediated by mating type in filamentous ascomycetes
-
DOI 10.1016/S1369-5274(00)00073-4
-
Shiu PKT, Glass NL. 2000. Cell and nuclear recognition mechanisms mediated by mating type in filamentous ascomycetes. Curr Opin Microbiol. 3:183-188. (Pubitemid 30180071)
-
(2000)
Current Opinion in Microbiology
, vol.3
, Issue.2
, pp. 183-188
-
-
Shiu, P.K.T.1
Glass, N.L.2
-
64
-
-
79951618472
-
Rate heterogeneity, ancestral character state reconstruction, and the evolution of limb morphology in Lerista (Scincidae, Squamata)
-
Skinner A. 2010. Rate heterogeneity, ancestral character state reconstruction, and the evolution of limb morphology in Lerista (Scincidae, Squamata). Syst Biol. 59:723-740.
-
(2010)
Syst Biol
, vol.59
, pp. 723-740
-
-
Skinner, A.1
-
65
-
-
0025326469
-
Neurospora crassa a mating-type region
-
Staben C, Yanofsky C. 1990. Neurospora crassa a mating-type region. Proc Natl Acad Sci USA. 87:4917-4921.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 4917-4921
-
-
Staben, C.1
Yanofsky, C.2
-
66
-
-
2942527473
-
Gene prediction with a hidden Markov model and a new intron submodel
-
DOI 10.1093/bioinformatics/btg1080
-
Stanke M, Waack S. 2003. Gene prediction with a hiddenMarkov model and a new intron submodel. Bioinformatics 19(Suppl. 2), ii215-ii225. (Pubitemid 41296659)
-
(2003)
Bioinformatics
, vol.19
, Issue.SUPPL. 2
-
-
Stanke, M.1
Waack, S.2
-
67
-
-
0000951644
-
Is self-fertilization an evolutionary dead end? Revisiting an old hypothesis with genetic theories and a macroevolutionary approach
-
Takebayashi N,Morrell PL. 2001. Is self-fertilization an evolutionary dead end? Revisiting an old hypothesis with genetic theories and a macroevolutionary approach. Am J Bot. 88:1143-1150. (Pubitemid 33645022)
-
(2001)
American Journal of Botany
, vol.88
, Issue.7
, pp. 1143-1150
-
-
Takebayashi, N.1
Morrell, P.L.2
-
68
-
-
57149099395
-
Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training
-
Ter-Hovhannisyan V, Lomsadze A, Chernoff YO, Borodovsky M. 2008. Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training. Genome Res. 18:1979-1990.
-
(2008)
Genome Res
, vol.18
, pp. 1979-1990
-
-
Ter-Hovhannisyan, V.1
Lomsadze, A.2
Chernoff, Y.O.3
Borodovsky, M.4
-
69
-
-
41049088756
-
Eukaryotic transposable elements: Teaching old genomes new tricks
-
Caporale LH, editor New York: Oxford University Press
-
Wessler SR. 2006. Eukaryotic transposable elements: teaching old genomes new tricks. In: Caporale LH, editor. The implicit genome. New York: Oxford University Press. p. 138-162.
-
(2006)
The Implicit Genome
, pp. 138-162
-
-
Wessler, S.R.1
-
70
-
-
0001355008
-
A synthetic medium favouring sexual reproduction
-
Westergaard M, Mitchell HK. 1947. A synthetic medium favouring sexual reproduction. Am J Bot. pp. 573-577.
-
(1947)
Am J Bot
, pp. 573-577
-
-
Westergaard, M.1
Mitchell, H.K.2
-
71
-
-
42549158349
-
The evolutionary trajectory of the mating-type (mat) genes in Neurospora relates to reproductive behavior of taxa
-
Wik L, Karlsson M, Johannesson H. 2008. The evolutionary trajectory of the mating-type (mat) genes in Neurospora relates to reproductive behavior of taxa. BMC Evol Biol. 8:109.
-
(2008)
BMC Evol Biol
, vol.8
, pp. 109
-
-
Wik, L.1
Karlsson, M.2
Johannesson, H.3
-
72
-
-
0034516348
-
Molecular organization of mating type loci in heterothallic, homothallic, and asexual gibberella/fusarium species
-
DOI 10.1006/fgbi.2000.1226
-
Yun SH, Arie T, Kaneko I, Yoder OC, Turgeon BG. 2000. Molecular organization of mating type loci in heterothallic, homothallic, and asexual Gibberella/Fusarium species. Fungal Genet Biol. 31:7-20. (Pubitemid 32066163)
-
(2000)
Fungal Genetics and Biology
, vol.31
, Issue.1
, pp. 7-20
-
-
Yun, S.-H.1
Arie, T.2
Kaneko, I.3
Yoder, O.C.4
Turgeon, B.G.5
-
73
-
-
0033545986
-
Evolution of the fungal self-fertile reproductive life style from self- sterile ancestors
-
DOI 10.1073/pnas.96.10.5592
-
Yun SH, Berbee ML, Yoder OC, Turgeon BG. 1999. Evolution of the fungal self-fertile reproductive life style from self-sterile ancestors. Proc Natl Acad Sci USA. 96:5592-5597. (Pubitemid 29234663)
-
(1999)
Proceedings of the National Academy of Sciences of the United States of America
, vol.96
, Issue.10
, pp. 5592-5597
-
-
Yun, S.-H.1
Berbee, M.L.2
Yoder, O.C.3
Turgeon, B.G.4
-
74
-
-
77955270130
-
Characterization of the mating type (MAT) locus in the Phialocephala fortinii s. l.-Acephala applanata species complex
-
Zaffarano PL, Duo A, Gruenig CR. 2010. Characterization of the mating type (MAT) locus in the Phialocephala fortinii s. l.-Acephala applanata species complex. Fungal Genet Biol. 47:761-772.
-
(2010)
Fungal Genet Biol
, vol.47
, pp. 761-772
-
-
Zaffarano, P.L.1
Duo, A.2
Gruenig, C.R.3
-
75
-
-
0033635259
-
A long terminal repeat retrotransposon Cgret from the phytopathogenic fungus Colletotrichum gloeosporioides on cranberry
-
Zhu PL, Oudemans PV. 2000. A long terminal repeat retrotransposon Cgret from the phytopathogenic fungus Colletotrichum gloeosporioides on cranberry. Curr Genet. 38:241-247.
-
(2000)
Curr Genet
, vol.38
, pp. 241-247
-
-
Zhu, P.L.1
Oudemans, P.V.2
|