Estimating functional groups in human gut microbiome with probabilistic topic models

IEEE Transactions on Nanobioscience

Volumn 11, Issue 3, 2012, Pages 203-215

  Chen, Xin ^a   He, Tingting ^b   Hu, Xiaohua ^a   Zhou, Yanhong ^c   An, Yuan ^a   Wu, Xindong ^d  

^a DREXEL UNIVERSITY   (United States)

^b CENTRAL CHINA NORMAL UNIVERSITY   (China)

^c HUAZHONG UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

^d University of Vermont ^*  (United States)

Author keywords

Bioinformatics databases; biological data mining; metagenomics; probabilistic topic model

Indexed keywords

BAYESIAN METHODS; BIOINFORMATICS DATABASE; BIOLOGICAL DATA MINING; CDS; FUNCTIONAL ELEMENTS; HUMAN GUTS; METAGENOMICS; PATHWAY MAPPING; PROBABILISTIC TOPIC MODELS; RELATIVE ABUNDANCE; UNLABELED DATA;

BAYESIAN NETWORKS; BIOINFORMATICS; GENES;

FUNCTIONAL GROUPS;

ARTICLE; BACTERIAL GENE; BACTERIUM; BIOLOGICAL MODEL; BIOLOGY; DATA MINING; GENETIC DATABASE; GENETICS; HUMAN; INTESTINE; METAGENOME; METAGENOMICS; METHODOLOGY; MICROBIOLOGY; STATISTICAL MODEL;

BACTERIA; COMPUTATIONAL BIOLOGY; DATA MINING; DATABASES, GENETIC; GENES, BACTERIAL; HUMANS; INTESTINES; METAGENOME; METAGENOMICS; MODELS, GENETIC; MODELS, STATISTICAL;

EID: 84866510970     PISSN: 15361241     EISSN: None     Source Type: Journal    
DOI: 10.1109/TNB.2012.2212204     Document Type: Article

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