I.4 screening experimental designs for quantitative trait loci, association mapping, genotype-by environment interaction, and other investigations

Frontiers in Physiology

Volumn 3 JUN, Issue , 2012, Pages

  Federer, Walter T ^a   Crossa, Jose ^b  

^a Department of Obstetrics Gynecology   (United States)

^b INTERNATIONAL MAIZE AND WHEAT IMPROVEMENT CENTER CIMMYT   (Mexico)

Author keywords

Augmented experimental designs; Genotype x environment interaction; Multi environment trials; Quantitative trait loci (QTL)

Indexed keywords

EID: 84866362330     PISSN: None     EISSN: 1664042X     Source Type: Journal    
DOI: 10.3389/fphys.2012.00156     Document Type: Article

References (18)

1. Cullis, B. R., Smith, A. B., and Coomies, N. E. (2006). On the design of early generation variety trials with correlated data. J. Agric. Biol. Environ. Stat. 11,381-393.
2. Federer, W. T. (1956). Augmented (or hoonuiaku) designs. Hawaii. Plant. Rec. 55,191-208.
3. Federer, W. T. (1961). Augmented designs with one-way elimination of heterogeneity. Biometrics 17, 447-473.
4. Federer, W. T. (2002). Construction and analysis of an augmented lattice square design. Biom. J. 44, 251-257.
5. Federer, W. T. (2003a). Exploratory model selection for spatially designed experiments - some examples.J. DataSci. 1,231-248.
6. Federer, W. T. (2003b). "Analysis for an experiment designed as an augmented lattice square design," in Handbook of Formulas and Software for Plant Geneticists and Breeders, ed. M. S. Kang (Binghamton, NY: Food Products Press), 283-289.
7. Federer, W. T. (2005a). Augmented split block experiment design. Agron. J. 97, 578-586.
8. Federer, W. T. (2005b). Augmented split plot experiment design. J. Crop Improv. 15,81-96.
9. Federer, W. T., and King, F. (2007). Variations on Split Plot and Split Block Experiment Designs. Hobo-ken, NJ: John Wiley and Sons Inc, 270.
10. Federer, W. T., Nair, R. C., and Raghavarao, D. (1975). Some augmented row-column designs. Biometrics 31, 361-373.
11. Federer, W. T., and Raghavarao, D. (1975). On augmented designs. Biometrics 31,29-35.
12. Federer, W. T., Reynolds, M., and Crossa, J. (2001). Combining results from augmented designs over sites. Agron. J. 93, 389-395.
13. Federer, W. T., and Wolfinger, R. D. (2003). "Augmented row-column design and trend analyses," in Handbook of Formulas and SoftwareforPlantGeneticistsand Breeders, ed. M. S. Kang (Binghamton, NY: Food Products Press), 291-295.
14. Gendex. (2009). Gendex DOE Toolkit. Available at: http:// designcomputing.net/gendex/
15. Martin, R. J., Eccleston, J. A., and Chan, B. S. P. (2004). Efficient factorial experiments when data are spatially correlated. J. Stat. Plan. Inference 126, 377-395.
16. Sprague, G. F., and Federer, W. T. (1951). A comparison of variance components in corn yield trials: II. Error, year X variety, location X variety, and variety components. Agron. J. 43, 535-541.
17. Wolfinger, R. D., Federer, W T., and Cordero-Brana, O. (1997). Recovering information in augmented designs, using SAS PROC GLM and PROC MIXED. Agron. J. 89, 856-859.
18. Yates, F. (1936). A new method of arranging variety trials involving a large number of varieties. J. Agric. Sci. 26, 424-455.