Genome sequence of Methylobacterium sp. strain GXF4, a xylem- associated bacterium isolated from Vitis vinifera L. grapevine

Journal of Bacteriology

Volumn 194, Issue 18, 2012, Pages 5157-5158

  Gan, Han Ming ^a   Chew, Teong Han ^b   Hudson, André O ^c   Savka, Michael A ^c  

^a ScienceVision SB   (Malaysia)

^b UNIVERSITI TEKNOLOGI MALAYSIA   (Malaysia)

^c ROCHESTER INSTITUTE OF TECHNOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CONTIG; RIBOSOME RNA;

BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIUM ISOLATE; GENE SEQUENCE; METHYLOBACTERIUM; NONHUMAN; NOTE; OPEN READING FRAME; PRIORITY JOURNAL; VITIS; XYLEM;

BACTERIA (MICROORGANISMS); METHYLOBACTERIUM; METHYLOBACTERIUM SP.; VITIS; VITIS VINIFERA;

EID: 84866357904     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.01201-12     Document Type: Note

References (11)

1. Bisztray GD, et al. 2011. Grapevine pathogens spreading with propagating plant stock: detection and methods for elimination, p 1-88. In Szabo PV, Shojania J (ed), Grapevines: varieties, cultivation, and management. Nova Science Publishers, Hauppauge, NY.
2. In Szabo PV, Shojania J (ed), Grapevines: varieties, cultivation, and management. Nova Science Publishers, Hauppauge, NY.
3. Chistoserdova L, Chen SW, Lapidus A, Lidstrom ME. 2003. Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view. J. Bacteriol. 185:2980-2987.
4. Conesa A, et al. 2005. Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21:3674-3676.
5. Hudson AO, Ahmad NH, Van Buren R, Savka MA. 2010. Sugarcane and grapevine endophytic bacteria: isolation, detection of quorum sensing signals and identification by 16S v3 rDNAsequence analysis, p 801-806. In Vilas AM (ed), Current research, technology and education topics in applied microbiology and microbial biotechnology, vol 2. Formatex Research Center, Badajoz, Spain,
6. Vilas AM (ed), Current research, technology and education topics in applied microbiology and microbial biotechnology, vol 2. Formatex Research Center, Badajoz, Spain,
7. Hyatt D, et al. 2010. Prodigal: prokaryotic gene recognition and translation initiation site identification. BMC Bioinformatics 11:119.
8. Lagesen K, et al. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
9. Lee KJD, Marcus SE, Knox JP. 2011. Cell wall biology: perspectives from cell wall imaging. Mol. Plant 4:212-219.
10. Lowe TM, Eddy SR. 1997. tRNA-scan-SE: a program for improved detection of transfer RNAgenes in genomic sequence. Nucleic Acids Res. 25: 955-964.
11. Purcell AH, Hopkins DL. 1996. Fastidious xylem-limited bacterial plant pathogens. Annu. Rev. Phytopathol. 34:131-151.