Complete genome sequences of Corynebacterium pseudotuberculosis strains 3/99-5 and 42/02-A, isolated from sheep in scotland and Australia, respectively

Journal of Bacteriology

Volumn 194, Issue 17, 2012, Pages 4736-4737

  Pethick, Florence E ^a,b   Lainson, Alex F ^a   Yaga, Raja ^a   Flockhart, Allen ^a   Smith, David G E ^a,b   Donachie, Willie ^a   Cerdeira, Louise T ^c   Silva, Artur ^c   Bol, Erik ^c   Lopes, Thiago S ^c   Barbosa, Maria S ^c   Pinto, Anne C ^d   dos Santos, Anderson R ^d   Soares, Siomar C ^d   Almeida, Sintia S ^d   Guimaraes, Luis C ^d   Aburjaile, Flavia F ^d   Abreu, Vinicius A C ^d   Ribeiro, Dayana ^d   Fiaux, Karina K ^d   Diniz, Carlos A A ^d   Barbosa, Eudes G V ^d   Pereira, Ulisses P ^e   Hassan, Syed S ^d   Ali, Amjad ^d   Bakhtiar, Syeda M ^d   Dorella, Fernanda A ^d   Carneiro, Adriana R ^c   Ramos, Rommel T J ^c   Rocha, Flavia S ^d   Schneider, Maria P C ^c   Miyoshi, Anderson ^d   Azevedo, Vasco ^d   Fontaine, Michael C ^a   more..

^a MOREDUN RESEARCH INSTITUTE   (United Kingdom)

^b UNIVERSITY OF GLASGOW   (United Kingdom)

^c Instituto de Ciencias Biologicas   (Brazil)

^d FEDERAL UNIVERSITY OF MINAS GERAIS   (Brazil)

^e FEDERAL UNIVERSITY OF LAVRAS   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA; TRANSFER RNA;

AUSTRALIA; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIUM ISOLATION; CHROMOSOME; CORYNEBACTERIUM PSEUDOTUBERCULOSIS; EPIDEMIC; GENE IDENTIFICATION; GENE SEQUENCE; GEOGRAPHIC DISTRIBUTION; NONHUMAN; NOTE; NUCLEOTIDE SEQUENCE; OPERON; PRIORITY JOURNAL; PSEUDOGENE; SHEEP; UNITED KINGDOM;

ANIMALS; AUSTRALIA; BASE SEQUENCE; CHROMOSOME MAPPING; CORYNEBACTERIUM INFECTIONS; CORYNEBACTERIUM PSEUDOTUBERCULOSIS; GENOME, BACTERIAL; LYMPHADENITIS; MOLECULAR SEQUENCE DATA; SCOTLAND; SEQUENCE ANALYSIS, DNA; SHEEP; SHEEP DISEASES;

BACTERIA (MICROORGANISMS); CORYNEBACTERIUM PSEUDOTUBERCULOSIS; OVIS; OVIS ARIES;

EID: 84866333506     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.00918-12     Document Type: Note

References (8)

1. Baird GJ, Fontaine MC. 2007. Corynebacterium pseudotuberculosis and its role in ovine caseous lymphadenitis. J. Comp. Pathol. 137:179-210.
2. Conner KM, Fontaine MC, Rudge K, Baird GJ, Donachie W. 2007. Molecular genotyping of multinational ovine and caprine Corynebacterium pseudotuberculosis isolates using pulsed-field gel electrophoresis. Vet. Res. 38:613-623.
3. Lagesen K, et al. 2007. RNAmmer:consistent annotation of rRNA genes in genomic sequences. Nucleic Acids Res. 35:3100-3108.
4. Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25: 955-964.
5. Miller JR, et al. 2008. Aggressive assembly of pyrosequencing reads with mates. Bioinformatics 24:2818-2824.
6. Rutherford K, et al. 2000. Artemis: sequence visualization and annotation. Bioinformatics 16:944-945.
7. Zdobnov EM, Apweiler R. 2001. InterProScan-an integration platform for the signature-recognition methods in InterPro. Bioinformatics 17:847-848.
8. Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829.