Phenanthrene biodegradation by halophilic Martelella sp. AD-3

Journal of Applied Microbiology

Volumn 113, Issue 4, 2012, Pages 779-789

  Feng, T C ^a   Cui, C Z ^a   Dong, F ^a   Feng, Y Y ^a   Liu, Y D ^a   Yang, X M ^a  

^a EAST CHINA UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

Author keywords

Biodegradation; Halophilic micro organism; Metabolic pathway; Phenanthrene; Toxicity

Indexed keywords

ANTHRACENE; BIOASSAY; BIODEGRADABILITY; BIODEGRADATION; BIOMOLECULES; METABOLISM; SALICYLIC ACID; TOXICITY;

CONDITION; DIOXYGENATION; ENZYMES ACTIVITY; HALOPHILIC MICRO-ORGANISM; HALOPHILIC STRAINS; METABOLIC PATHWAYS; MICRO-ORGANISMS; PHENANTHRENE; PROPERTY; VIBRIO FISCHERI;

METABOLITES;

9 PHENANTHROL; ANTHRACENE; BENZO[A]PYRENE; GENTISIC ACID; NAPHTHALENE; PHENANTHRENE; PHENANTHRENEQUINONE; POLYCYCLIC AROMATIC HYDROCARBON DERIVATIVE; PYRENE; SALICYLIC ACID; UNCLASSIFIED DRUG;

ALCOHOL; BACTERIUM; BIODEGRADATION; BIOREMEDIATION; CONCENTRATION (COMPOSITION); ENZYME ACTIVITY; METABOLISM; METABOLITE; PAH; PH; PHENANTHRENE; TOXICITY;

ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; BIODEGRADABILITY; BIODEGRADATION; CELL DENSITY; CONCENTRATION (PARAMETERS); ENZYME ACTIVITY; HALOPHILIC BACTERIUM; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; MARTELELLA; MASS FRAGMENTOGRAPHY; NONHUMAN; PH; SALINITY; VIBRIO FISCHERI;

BACTERIA (MICROORGANISMS); MARTELELLA; VIBRIO FISCHERI;

EID: 84866304168     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2012.05386.x     Document Type: Article

References (44)

1. Arulazhagan, P. and Vasudevan, N. (2009) Role of a moderately halophilic bacterial consortium in the biodegradation of polyaromatic hydrocarbons. Mar Pollut Bull 58, 256-262.
2. Arulazhagan, P. and Vasudevan, N. (2011) Biodegradation of polycyclic aromatic hydrocarbons by a halotolerant bacterial strain Ochrobactrum sp. VA1. Mar Pollut Bull 62, 388-394.
3. Bradford, M.M. (1976) Arapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal biochem 72, 248-254.
4. Capotorti, G., Cesti, P., Lombardi, A. and Guglielmetti, G. (2005) Formation of sulfate conjugates metabolites in the degradation of phenanthrene, anthracene, pyrene and benzo[a]pyrene by the ascomycete aspergillus terreus. Polycycl Aromatic Compd 25, 197-213.
5. Cui, C.Z., Feng, T.C., Yu, Y.Q., Dong, F., Feng, Y.Y. and Liu, Y.D. (2012) Isolation, characterization of a anthracene degrading bacterium Martelella sp. AD-3 and cloning of dioxygenase gene. Environ Sci (Chinese) 10, in press.
6. Deveryshetty, J. and Phale, P.S. (2009) Biodegradation of phenanthrene by Pseudomonas sp. strain PPD: purification and characterization of 1-hydroxy-2-naphthoic acid dioxygenase. Microbiology 155, 3083-3091.
7. Deveryshetty, J. and Phale, P.S. (2010) Biodegradation of phenanthrene by Alcaligenes sp. strain PPH: partial purification and characterization of 1-hydroxy-2-naphthoic acid hydroxylase. FEMS Microbiol Lett 311, 93-101.
8. Doddamani, H.P. and Ninnekar, H.Z. (2000) Biodegradation of Phenanthrene by a Bacillus Species. Curr Microbiol 41, 11-14.
9. Elgh-Dalgren, K., Arwidsson, Z., Ribé, V., Waara, S., von Kronhelm, T. and van Hees, P.A.W. (2011) Bioremediation of a soil industrially contaminated by wood preservatives - degradation of polycyclic aromatic hydrocarbons and monitoring of coupled arsenic translocation. Water Air Soil Pollut 214, 275-285.
10. Fu, W. and Oriel, P. (1998) Gentisate 1, 2-dioxygenase from Haloferax sp. D1227. Extremophiles, 2, 439-446.
11. Guerin, W.F. and Jones, G.E. (1988) Two-stage mineralisation of phenanthrene by estuarine enrichment cultures. Appl Environ Microbiol 54, 929-936.
12. Haritash, A.K. and Kaushik, C.P. (2009) Biodegradation aspects of Polycyclic Aromatic Hydrocarbons (PAHs): a review. J Hazard Mater 16, 1-15.
13. Hedlund, B.P., Geiselbrecht, A.D., Bair, T.J. and Staley, J.T. (1999) Polycyclic aromatic hydrocarbon degradation by a new marine bacterium, Neptunomonas naphthovorans gen. nov., sp. nov. Appl Environ Microbiol 65, 251-259.
14. van Herwijnen, R., Wattiau, P., Bastiaens, L., Springael, D., Daal, L., Jonker, L., Springael, D., Govers, H.A.J. et al. (2003) Elucidation of the metabolic pathway of fluorene and cometabolic pathways of phenanthrene, fluoranthene, anthracene and dibenzothiophene by Sphingomonas sp. LB126. Res Microbiol 154, 199-206.
15. Houghton, J.E. and Shanley, M.S. (1994) Catabolic potential of Pseudomonads: a regulatory perspective. In: Biological Degradation and Bioremediation of Toxic Chemicals ed. Rasul Chaudhry, G. pp. 11-32. London: Chapman & Hall.
16. Ishiyama, D., Vujaklija, D. and Davies, J. (2004) Novel pathway of salicylate degradation by Streptomyces sp. strain WA46. Appl Environ Microbiol 70, 1297-1306.
17. Kasai, Y., Shindo, K., Harayama, S. and Misawa, N. (2003) Molecular characterization and substrate preference of a polycyclic aromatic hydrocarbon dioxygenase from Cycloclasticus sp. strain A5. Appl Environ Microbiol 69, 6688-6697.
18. Kazunga, C., Aitken, M.D., Gold, A. and Sangaiah, R. (2001) Fluoranthene-2, 3-and -1, 5-diones are novel products from the bacterial transformation of fluoranthene. Environ Sci Technol 35, 917-922.
19. Kim, Y.H., Freeman, J.P., Moody, J.D., Engesser, K.H. and Cerniglia, C.E. (2005) Effects of pH on the degradation of phenanthrene and pyrene by Mycobacterium vanbaalenii PYR-1. Appl Microbiol Biotechnol 67, 275-285.
20. Li, J. and Bai, R. (2005) Effect of a commercial alcohol ethoxylate surfactant (C11-15E7) on biodegradation of phenanthrene in a saline water medium by Neptunomonas naphthovorans. Biodegradation 16, 57-65.
21. Ling, J.Y., Zhang, G.Y., Sun, H.B., Fan, Y.Y., Ju, J.H. and Zhang, C.K. (2011) Isolation and characterization of a novel pyrene-degrading Bacillus vallismortis strain JY3A. Sci Total Environ 409, 1994-2000.
22. McConkey, B.J., Duxbury, C.L., Dixon, D.G. and Greenberg, B.M. (1997) Toxicity of PAH photooxidation product to the bacteria Photobacterium phosphoreum and the duckweed Lemna gibba: effects of phenanthrene and its primary photoproduct, phenanthrenequinone. Environ Toxicol Chem 16, 892-899.
23. Melcher, R.J., Apitz, S.E. and Hemmingsen, B.B. (2002) Impact of irradiation and polycyclic aromatic hydrocarbon spiking on microbial populations in marine sediment for future aging and biodegradability studies. Appl Environ Microbiol 68, 2858-2868.
24. Mohan, S.V., Kisa, T., Ohkuma, T., Kanaly, R.A. and Shimizu, Y. (2006) Bioremediation technologies for treatment of PAH-contaminated soil and strategies to enhance process efficiency. Rev Environ Sci Biotechnol 5, 347-374.
25. Molina, M.C., Gonza′lez, N., Bautista, L.F., Sanz, R., Simarro, R., Sa′nchez, I. and Sanz, J.L. (2009) Isolation and genetic identification of PAH degrading bacteria from a microbial consortium. Biodegradation 20, 789-800.
26. Moody, J.D., Freeman, J.P., Fu, P.P. and Cerniglia, C.E. (2004) Degradation of benzo[a]pyrene by Mycobacterium vanbaalenii PYR-1. Appl Environ Microbiol 70, 340-345.
27. Pagnout, C., Rast, C., Veber, A.M., Poupin, P. and Fe′rard, J.F. (2006) Ecotoxicological assessment of PAHs and their dead-end metabolites after degradation by Mycobacterium sp. strain SNP11. Ecotoxicol Environ Saf 65, 151-158.
28. Parikh, S.J., Chorover, J. and Burgos, W.D. (2004) Interaction of phenanthrene and its primary metabolite (1-hydroxy-2-naphthoic acid) with estuarine sediment and humic fractions. J Contam Hydrol 72, 1-22.
29. Prabhu, Y. and Phale, P.S. (2003) Biodegradation of phenanthrene by Pseudomonas sp. strain PP2: novel metabolic pathway, role of biosurfactant and cell surface hydrophobicity in hydrocarbon assimilation. Appl Microbiol Biotechnol 61, 342-351.
30. Samanta, S.K., Chakraborti, A.K. and Jain, R.K. (1999) Degradation of phenanthrene by different bacteria: evidence for novel transformation sequences involving the formation of 1-naphthol. Appl Microbiol Biotechnol 53, 98-107.
31. Seo, J.S., Keum, Y.S., Hu, Y., Lee, S.E. and Li, Q.X. (2007) Degradation of phenanthrene by Burkholderia sp. C3: initial 1, 2- and 3, 4-dioxygenation and meta- and ortho-cleavage of naphthalene-1, 2-diol. Biodegradation 18, 123-131.
32. Shin, K.H., Kim, K.W. and Seagren, E.A. (2004) Combined effects of pH and biosurfactant addition on solubilization and biodegradation of phenanthrene. Appl Microbiol Biotechnol 65, 336-343.
33. Simarro, R., González, N., Bautista, L.F., Sanz, R. and Molina, M.C. (2011) Optimisation of key abiotic factors of PAH (naphthalene, phenanthrene and anthracene) biodegradation process by a bacterial consortium. Water Air Soil Pollut 217, 365-374.
34. Song, Y.F., Gong, P., Wilke, B.M., Zhang, W., Song, X.Y., Sun, T.H. and Ackland, M.L. (2007) Genotoxicity assessment of soils from wastewater irrigation areas and bioremediation sites using the Vicia faba root tip micronucleus assay. J Environ Monit 9, 182-186.
35. Swetha, V.P., Basu, A. and Phale, P.S. (2007) Purification and characterization of 1-naphthol-2-hydroxylase from carbaryl-degrading Pseudomonas strain C4. J Bacteriol 189, 2660-2666.
36. Tam, N.F.Y., Guo, C.L., Yau, W.Y. and Wong, Y.S. (2002) Preliminary study on biodegradation of phenantherene by bacteria isolated from mangrove sediments in Hong kong. Mar Pollut Bull 45, 316-324.
37. Tang, Y.J., Qi, L.H. and Krieger-Brockett, B. (2005) Evaluating factors that influence microbial phenanthrene biodegradation rates by regression with categorical variables. Chemosphere 59, 729-741.
38. Tao, X.Q., Lu, G.N., Dang, Z., Yang, C. and Yi, X.Y. (2007) A phenanthrene-degrading strain Sphingomonas sp. GY2B isolated from contaminated soils. Process Biochem 42, 401-408.
39. Tongpim, S. and Pickard, M.A. (1999) Cometabolic oxidation of phenanthrene to phenanthrene trans-9, 10-dihydrodiol by Mycobacterium strain S1 growing on anthracene in the presence of phenanthrene. Can J Microbiol 45, 369-376.
40. Woo, S.H. and Park, J.M. (2004) Microbial degradation and enhanced bioremediation of polycyclic aromatic hydrocarbons. J Ind Eng Chem 10, 16-23.
41. Zhao, B.S., Wang, H., Mao, X.W. and Li, R.R. (2009) Biodegradation of phenanthrene by a halophilic bacterial consortium under aerobic conditions. Curr Microbiol 58, 205-210.
42. Zhong, Y., Luan, T.G., Lin, L., Liu, H. and Tam, N.F.Y. (2011) Production of metabolites in the biodegradation of phenanthrene, fluoranthene and pyrene by the mixed culture of Mycobacterium sp. and Sphingomonas sp. Bioresour Technol 102, 2965-2972.
43. Zhou, N.Y., Al-Dulayymi, J., Baird, M.S. and Williams, P.A. (2002) Salicylate 5-hydroxylase from Ralstonia sp. strain U2: a monooxygenase with close relationships to and shared electron transport proteins with naphthalene dioxygenase. J Bacteriol 184, 1547-1555.
44. Zhuang, X.L., Han, Z., Bai, Z.H., Zhuang, G.Q. and Shim, H. (2010) Progress in decontamination by halophilic microorganisms in saline wastewater and soil. Environ Pollut 158, 1119-1126.