Background estimation of biomedical raman spectra using a geometric approach

Spectroscopy (New York)

Volumn 27, Issue 5-6, 2012, Pages 441-447

  Kourkoumelis, Nikolaos ^a   Polymeros, Alexandros ^b   Tzaphlidou, Margaret ^a  

^a UNIVERSITY OF IOANNINA   (Greece)

^b UNIVERSITY OF IOANNINA   (Greece)

Author keywords

[No Author keywords available]

Indexed keywords

BACKGROUND ESTIMATION; BACKGROUND SIGNALS; BIOLOGICAL SAMPLES; BIOMEDICAL APPLICATIONS; CONVEX HULL; GEOMETRIC APPROACHES; INTRINSIC FLUORESCENCE; ORGANIC MOLECULES; RAMAN SIGNAL; SEMI-AUTOMATED; SPECTRAL DATA; USER INTERVENTION;

COMPUTATIONAL GEOMETRY; CURVE FITTING; MEDICAL APPLICATIONS; RAMAN SPECTROSCOPY;

RAMAN SCATTERING;

ALGORITHM; ARTICLE; AUTOMATION; BIOMEDICINE; CONCEPTUAL FRAMEWORK; CONTROLLED STUDY; FLUORESCENCE; GEOMETRY; PRINCIPAL COMPONENT ANALYSIS; RAMAN SPECTROMETRY; SIGNAL TRANSDUCTION; WAVEFORM;

EID: 84866262313     PISSN: 07124813     EISSN: 1875922X     Source Type: Journal    
DOI: 10.1155/2012/530791     Document Type: Article

References (20)

1. Lieber C. A., Mahadevan-Jansen A., Automated method for subtraction of fluorescence from biological Raman spectra. Applied Spectroscopy 2003 57 11 1363 1367 2-s2.0-0242498775 10.1366/000370203322554518
2. Beier B. D., Berger A. J., Method for automated background subtraction from Raman spectra containing known contaminants. Analyst 2009 134 6 1198 1202 2-s2.0-67149108592 10.1039/b821856k
3. Jirasek A., Schulze G., Yu M. M. L., Blades M. W., Turner R. F. B., Accuracy and precision of manual baseline determination. Applied Spectroscopy 2004 58 12 1488 1499 2-s2.0-10644221320 10.1366/0003702042641236
4. Mazet V., Carteret C., Brie D., Idier J., Humbert B., Background removal from spectra by designing and minimising a non-quadratic cost function. Chemometrics and Intelligent Laboratory Systems 2005 76 2 121 133 2-s2.0-15744371907 10.1016/j.chemolab.2004.10.003 (Pubitemid 40410570)
5. Leger M. N., Ryder A. G., Comparison of derivative preprocessing and automated polynomial baseline correction method for classification and quantification of narcotics in solid mixtures. Applied Spectroscopy 2006 60 2 182 193 2-s2.0-33644778589 10.1366/000370206776023304 (Pubitemid 43341859)
6. Zhao J., Lui H., Mclean D. I., Zeng H., Automated autofluorescence background subtraction algorithm for biomedical raman spectroscopy. Applied Spectroscopy 2007 61 11 1225 1232 2-s2.0-36049009054 10.1366/000370207782597003 (Pubitemid 350096645)
7. Vickers T. J., Wambles R. E., Mann C. K., Curve fitting and linearity: data processing in Raman spectroscopy. Applied Spectroscopy 2001 55 4 389 393 2-s2.0-0035303422 10.1366/0003702011952127 (Pubitemid 32471491)
8. Zhang D., Ben-Amotz D., Enhanced chemical classification of raman images in the presence of strong fluorescence interference. Applied Spectroscopy 2000 54 9 1379 1383 2-s2.0-0034269610
9. O'Grady A., Dennis A. C., Denvir D., McGarvey J. J., Bell S. E. J., Quantitative Raman spectroscopy of highly fluorescent samples using pseudosecond derivatives and multivariate analysis. Analytical Chemistry 2001 73 9 2058 2065 2-s2.0-0035326262 10.1021/ac0010072
10. Cai T. T., Zhang D., Ben-Amotz D., Enhanced chemical classification of Raman images using multiresolution wavelet transformation. Applied Spectroscopy 2001 55 9 1124 1130 2-s2.0-0035438605 10.1366/0003702011953289 (Pubitemid 33025102)
11. Camerlingo C., Zenone F., Gaeta G. M., Riccio R., Lepore M., Wavelet data processing of micro-Raman spectra of biological samples. Measurement Science and Technology 2006 17 2 298 303 2-s2.0-31144451384 10.1088/0957-0233/17/2/010 (Pubitemid 43131587)
12. Hu Y., Jiang T., Shen A., Li W., Wang X., Hu J., A background elimination method based on wavelet transform for Raman spectra. Chemometrics and Intelligent Laboratory Systems 2007 85 1 94 101 2-s2.0-33845492621 10.1016/j.chemolab.2006.05.004 (Pubitemid 44918161)
13. Ramos P. M., Ruisánchez I., Noise and background removal in Raman spectra of ancient pigments using wavelet transform. Journal of Raman Spectroscopy 2005 36 9 848 856 2-s2.0-25144433231 10.1002/jrs.1370 (Pubitemid 41345509)
14. Li J., Choo-Smith L. P., Tang Z., Sowa M. G., Background removal from polarized Raman spectra of tooth enamel using the wavelet transform. Journal of Raman Spectroscopy 2011 42 4 580 585 2-s2.0-79251476420 10.1002/jrs.2761
15. Zhang Z. M., Chen S., Liang Y. Z., Liu Z. X., Zhang Q. M., Ding L. X., Ye F., Zhou H., An intelligent background-correction algorithm for highly fluorescent samples in Raman spectroscopy. Journal of Raman Spectroscopy 2010 41 6 659 669 2-s2.0-77954066147 10.1002/jrs.2500
16. Mosier-Boss P. A., Lieberman S. H., Newbery R., Fluorescence rejection in Raman-spectroscopy by shifted-Spectra, edge-detection, and FFT filtering techniques. Applied Spectroscopy 1995 49 630 638
17. Hasegawa T., Nishijo J., Umemura J., Separation of Raman spectra from fluorescence emission background by principal component analysis. Chemical Physics Letters 2000 317 6 642 646 2-s2.0-0000352130
18. Weisstein E. W.,. Convex Hull, MathWorld-A Wolfram Web Resource
19. Weisstein E. W.,. Fourier Series, MathWorld-A Wolfram Web Resource
20. Weisstein E. W.,. Discrete Fourier Transform, MathWorld-A Wolfram Web Resource