-
1
-
-
0025924487
-
Genetic evidence for the spread of agriculture in Europe by demic diffusion
-
Sokal RR, Oden NL, Wilson C, (1991) Genetic evidence for the spread of agriculture in Europe by demic diffusion. Nature 351: 143-145.
-
(1991)
Nature
, vol.351
, pp. 143-145
-
-
Sokal, R.R.1
Oden, N.L.2
Wilson, C.3
-
3
-
-
0034143490
-
Geographic patterns: how to identify them and why
-
Barbujani G, (2000) Geographic patterns: how to identify them and why. Hum Biol 72: 133-153.
-
(2000)
Hum Biol
, vol.72
, pp. 133-153
-
-
Barbujani, G.1
-
4
-
-
0037370384
-
The application of molecular genetic approaches to the study of human evolution
-
Cavalli-Sforza LL, Feldman MW, (2003) The application of molecular genetic approaches to the study of human evolution. Nat Genet 33 (Suppl):: 266-275.
-
(2003)
Nat Genet
, vol.33
, Issue.SUPPL.
, pp. 266-275
-
-
Cavalli-Sforza, L.L.1
Feldman, M.W.2
-
5
-
-
80052748466
-
Perspectives on human population structure at the cusp of the sequencing era
-
Novembre J, Ramachandran S, (2011) Perspectives on human population structure at the cusp of the sequencing era. Annu Rev Genomics Hum Genet 12: 245-274.
-
(2011)
Annu Rev Genomics Hum Genet
, vol.12
, pp. 245-274
-
-
Novembre, J.1
Ramachandran, S.2
-
6
-
-
27644509150
-
Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa
-
Ramachandran S, Deshpande O, Roseman CC, Rosenberg NA, Feldman MW, et al. (2005) Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa. Proc Natl Acad Sci USA 102: 15942-15947.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 15942-15947
-
-
Ramachandran, S.1
Deshpande, O.2
Roseman, C.C.3
Rosenberg, N.A.4
Feldman, M.W.5
-
7
-
-
39749181521
-
Worldwide human relationships inferred from genome-wide patterns of variation
-
Li JZ, Absher DM, Tang H, Southwick AM, Casto AM, et al. (2008) Worldwide human relationships inferred from genome-wide patterns of variation. Science 319: 1100-1104.
-
(2008)
Science
, vol.319
, pp. 1100-1104
-
-
Li, J.Z.1
Absher, D.M.2
Tang, H.3
Southwick, A.M.4
Casto, A.M.5
-
8
-
-
39749197456
-
Genotype, haplotype and copy-number variation in worldwide human populations
-
Jakobsson M, Scholz SW, Scheet P, Gibbs JR, VanLiere JM, et al. (2008) Genotype, haplotype and copy-number variation in worldwide human populations. Nature 451: 998-1003.
-
(2008)
Nature
, vol.451
, pp. 998-1003
-
-
Jakobsson, M.1
Scholz, S.W.2
Scheet, P.3
Gibbs, J.R.4
VanLiere, J.M.5
-
9
-
-
55549115654
-
Genes mirror geography within Europe
-
Novembre J, Johnson T, Bryc K, Kutalik Z, Boyko AR, et al. (2008) Genes mirror geography within Europe. Nature 456: 98-101.
-
(2008)
Nature
, vol.456
, pp. 98-101
-
-
Novembre, J.1
Johnson, T.2
Bryc, K.3
Kutalik, Z.4
Boyko, A.R.5
-
10
-
-
65149089174
-
Genome-wide insights into the patterns and determinants of fine-scale population structure in humans
-
Biswas S, Scheinfeldt LB, Akey JM, (2009) Genome-wide insights into the patterns and determinants of fine-scale population structure in humans. Am J Hum Genet 84: 641-650.
-
(2009)
Am J Hum Genet
, vol.84
, pp. 641-650
-
-
Biswas, S.1
Scheinfeldt, L.B.2
Akey, J.M.3
-
11
-
-
0018080152
-
Synthetic maps of human gene frequencies in Europeans
-
Menozzi P, Piazza A, Cavalli-Sforza L, (1978) Synthetic maps of human gene frequencies in Europeans. Science 201: 786-792.
-
(1978)
Science
, vol.201
, pp. 786-792
-
-
Menozzi, P.1
Piazza, A.2
Cavalli-Sforza, L.3
-
12
-
-
33846006923
-
Population structure and eigenanalysis
-
Patterson N, Price AL, Reich D, (2006) Population structure and eigenanalysis. PLoS Genet 2: e190 doi:10.1371/journal.pgen.0020190.
-
(2006)
PLoS Genet
, vol.2
-
-
Patterson, N.1
Price, A.L.2
Reich, D.3
-
14
-
-
34848879778
-
PCA-correlated SNPs for structure identification in worldwide human populations
-
Paschou P, Ziv E, Burchard EG, Choudhry S, Rodriguez-Cintron W, et al. (2007) PCA-correlated SNPs for structure identification in worldwide human populations. PLoS Genet 3: e160 doi:10.1371/journal.pgen.0030160.
-
(2007)
PLoS Genet
, vol.3
-
-
Paschou, P.1
Ziv, E.2
Burchard, E.G.3
Choudhry, S.4
Rodriguez-Cintron, W.5
-
15
-
-
77249170740
-
Comparing spatial maps of human population-genetic variation using Procrustes analysis
-
Article 13
-
Wang C, Szpiech ZA, Degnan JH, Jakobsson M, Pemberton TJ, et al. (2010) Comparing spatial maps of human population-genetic variation using Procrustes analysis. Stat Appl Genet Mol Biol 9: Article 13.
-
(2010)
Stat Appl Genet Mol Biol
, vol.9
-
-
Wang, C.1
Szpiech, Z.A.2
Degnan, J.H.3
Jakobsson, M.4
Pemberton, T.J.5
-
16
-
-
49649084390
-
Correlation between genetic and geographic structure in Europe
-
Lao O, Lu TT, Nothnagel M, Junge O, Freitag-Wolf S, et al. (2008) Correlation between genetic and geographic structure in Europe. Curr Biol 18: 1241-1248.
-
(2008)
Curr Biol
, vol.18
, pp. 1241-1248
-
-
Lao, O.1
Lu, T.T.2
Nothnagel, M.3
Junge, O.4
Freitag-Wolf, S.5
-
17
-
-
56749169214
-
Investigation of the fine structure of European populations with applications to disease association studies
-
Heath SC, Gut IG, Brennan P, McKay JD, Bencko V, et al. (2008) Investigation of the fine structure of European populations with applications to disease association studies. Eur J Hum Genet 16: 1413-1429.
-
(2008)
Eur J Hum Genet
, vol.16
, pp. 1413-1429
-
-
Heath, S.C.1
Gut, I.G.2
Brennan, P.3
McKay, J.D.4
Bencko, V.5
-
18
-
-
57649098768
-
The genome-wide patterns of variation expose significant substructure in a founder population
-
Jakkula E, Rehnström K, Varilo T, Pietiläinen OPH, Paunio T, et al. (2008) The genome-wide patterns of variation expose significant substructure in a founder population. Am J Hum Genet 83: 787-794.
-
(2008)
Am J Hum Genet
, vol.83
, pp. 787-794
-
-
Jakkula, E.1
Rehnström, K.2
Varilo, T.3
Pietiläinen, O.P.H.4
Paunio, T.5
-
19
-
-
84863136294
-
Fine-scale estimation of location of birth from genome-wide single-nucleotide polymorphism data
-
Hoggart CJ, O'Reilly PF, Kaakinen M, Zhang W, Chambers JC, et al. (2012) Fine-scale estimation of location of birth from genome-wide single-nucleotide polymorphism data. Genetics 190: 669-677.
-
(2012)
Genetics
, vol.190
, pp. 669-677
-
-
Hoggart, C.J.1
O'Reilly, P.F.2
Kaakinen, M.3
Zhang, W.4
Chambers, J.C.5
-
20
-
-
67651028392
-
The impact of divergence time on the nature of population structure: an example from Iceland
-
Price AL, Helgason A, Palsson S, Stefansson H, St Clair D, et al. (2009) The impact of divergence time on the nature of population structure: an example from Iceland. PLoS Genet 5: e1000505 doi:10.1371/journal.pgen.1000505.
-
(2009)
PLoS Genet
, vol.5
-
-
Price, A.L.1
Helgason, A.2
Palsson, S.3
Stefansson, H.4
St Clair, D.5
-
21
-
-
79951787289
-
Swedish population substructure revealed by genome-wide single nucleotide polymorphism data
-
Salmela E, Lappalainen T, Liu J, Sistonen P, Andersen PM, et al. (2011) Swedish population substructure revealed by genome-wide single nucleotide polymorphism data. PLoS ONE 6: e16747 doi:10.1371/journal.pone.0016747.
-
(2011)
PLoS ONE
, vol.6
-
-
Salmela, E.1
Lappalainen, T.2
Liu, J.3
Sistonen, P.4
Andersen, P.M.5
-
22
-
-
66049121016
-
Fine-scaled human genetic structure revealed by SNP microarrays
-
Xing J, Watkins WS, Witherspoon DJ, Zhang Y, Guthery SL, et al. (2009) Fine-scaled human genetic structure revealed by SNP microarrays. Genome Res 19: 815-825.
-
(2009)
Genome Res
, vol.19
, pp. 815-825
-
-
Xing, J.1
Watkins, W.S.2
Witherspoon, D.J.3
Zhang, Y.4
Guthery, S.L.5
-
23
-
-
77956874880
-
Toward a more uniform sampling of human genetic diversity: a survey of worldwide populations by high-density genotyping
-
Xing J, Watkins WS, Shlien A, Walker E, Huff CD, et al. (2010) Toward a more uniform sampling of human genetic diversity: a survey of worldwide populations by high-density genotyping. Genomics 96: 199-210.
-
(2010)
Genomics
, vol.96
, pp. 199-210
-
-
Xing, J.1
Watkins, W.S.2
Shlien, A.3
Walker, E.4
Huff, C.D.5
-
24
-
-
72149083621
-
Mapping human genetic diversity in Asia
-
The HUGO Pan-Asian SNP Consortium
-
The HUGO Pan-Asian SNP Consortium (2009) Mapping human genetic diversity in Asia. Science 326: 1541-1545.
-
(2009)
Science
, vol.326
, pp. 1541-1545
-
-
-
25
-
-
57549105439
-
Analysis of East Asia genetic substructure using genome-wide SNP arrays
-
Tian C, Kosoy R, Lee A, Ransom M, Belmont JW, et al. (2008) Analysis of East Asia genetic substructure using genome-wide SNP arrays. PLoS ONE 3: e3862 doi:10.1371/journal.pone.0003862.
-
(2008)
PLoS ONE
, vol.3
-
-
Tian, C.1
Kosoy, R.2
Lee, A.3
Ransom, M.4
Belmont, J.W.5
-
26
-
-
76249102674
-
Genome-wide patterns of population structure and admixture in West Africans and African Americans
-
Bryc K, Auton A, Nelson MR, Oksenberg JR, Hauser SL, et al. (2010) Genome-wide patterns of population structure and admixture in West Africans and African Americans. Proc Natl Acad Sci USA 107: 786-791.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 786-791
-
-
Bryc, K.1
Auton, A.2
Nelson, M.R.3
Oksenberg, J.R.4
Hauser, S.L.5
-
27
-
-
78650059072
-
A genomic analysis identifies a novel component in the genetic structure of sub-Saharan African populations
-
Sikora M, Laayouni H, Calafell F, Comas D, Bertranpetit J, (2011) A genomic analysis identifies a novel component in the genetic structure of sub-Saharan African populations. Eur J Hum Genet 19: 84-88.
-
(2011)
Eur J Hum Genet
, vol.19
, pp. 84-88
-
-
Sikora, M.1
Laayouni, H.2
Calafell, F.3
Comas, D.4
Bertranpetit, J.5
-
28
-
-
71149105110
-
Genetic structure of the Han Chinese population revealed by genome-wide SNP variation
-
Chen J, Zheng H, Bei JX, Sun L, Jia WH, et al. (2009) Genetic structure of the Han Chinese population revealed by genome-wide SNP variation. Am J Hum Genet 85: 775-785.
-
(2009)
Am J Hum Genet
, vol.85
, pp. 775-785
-
-
Chen, J.1
Zheng, H.2
Bei, J.X.3
Sun, L.4
Jia, W.H.5
-
29
-
-
71449083275
-
Genomic dissection of population substructure of Han Chinese and its implication in association studies
-
Xu S, Yin X, Li S, Jin W, Lou H, et al. (2009) Genomic dissection of population substructure of Han Chinese and its implication in association studies. Am J Hum Genet 85: 762-774.
-
(2009)
Am J Hum Genet
, vol.85
, pp. 762-774
-
-
Xu, S.1
Yin, X.2
Li, S.3
Jin, W.4
Lou, H.5
-
30
-
-
53049090475
-
Japanese population structure, based on SNP genotypes from 7003 individuals compared to other ethnic groups: effects on population-based association studies
-
Yamaguchi-Kabata Y, Nakazono K, Takahashi A, Saito S, Hosono N, et al. (2008) Japanese population structure, based on SNP genotypes from 7003 individuals compared to other ethnic groups: effects on population-based association studies. Am J Hum Genet 83: 445-456.
-
(2008)
Am J Hum Genet
, vol.83
, pp. 445-456
-
-
Yamaguchi-Kabata, Y.1
Nakazono, K.2
Takahashi, A.3
Saito, S.4
Hosono, N.5
-
31
-
-
84876788534
-
Genomic patterns of homozygosity in worldwide human populations
-
Pemberton TJ, Absher D, Feldman MW, Myers RM, Rosenberg NA, et al. Genomic patterns of homozygosity in worldwide human populations. Am J Hum Genet (in press).
-
Am J Hum Genet
-
-
Pemberton, T.J.1
Absher, D.2
Feldman, M.W.3
Myers, R.M.4
Rosenberg, N.A.5
-
32
-
-
77954319663
-
Genetic evidence for high-altitude adaptation in Tibet
-
Simonson T, Yang Y, Huff CD, Yun H, Qin G, et al. (2010) Genetic evidence for high-altitude adaptation in Tibet. Science 329: 72-75.
-
(2010)
Science
, vol.329
, pp. 72-75
-
-
Simonson, T.1
Yang, Y.2
Huff, C.D.3
Yun, H.4
Qin, G.5
-
33
-
-
77956331627
-
Integrating common and rare genetic variation in diverse human populations
-
The International HapMap 3 Consortium
-
The International HapMap 3 Consortium (2010) Integrating common and rare genetic variation in diverse human populations. Nature 467: 52-58.
-
(2010)
Nature
, vol.467
, pp. 52-58
-
-
-
34
-
-
66049132908
-
Global distribution of genomic diversity underscores rich complex history of continental human populations
-
Auton A, Bryc K, Boyko AR, Lohmueller KE, Novembre J, et al. (2009) Global distribution of genomic diversity underscores rich complex history of continental human populations. Genome Res 19: 795-803.
-
(2009)
Genome Res
, vol.19
, pp. 795-803
-
-
Auton, A.1
Bryc, K.2
Boyko, A.R.3
Lohmueller, K.E.4
Novembre, J.5
-
35
-
-
0028184174
-
High resolution of human evolutionary trees with polymorphic microsatellites
-
Bowcock AM, Ruiz-Linares A, Tomfohrde J, Minch E, Kidd JR, et al. (1994) High resolution of human evolutionary trees with polymorphic microsatellites. Nature 368: 455-457.
-
(1994)
Nature
, vol.368
, pp. 455-457
-
-
Bowcock, A.M.1
Ruiz-Linares, A.2
Tomfohrde, J.3
Minch, E.4
Kidd, J.R.5
-
36
-
-
0037147189
-
Genetic structure of human populations
-
Rosenberg NA, Pritchard JK, Weber JL, Cann HM, Kidd KK, et al. (2002) Genetic structure of human populations. Science 298: 2381-2385.
-
(2002)
Science
, vol.298
, pp. 2381-2385
-
-
Rosenberg, N.A.1
Pritchard, J.K.2
Weber, J.L.3
Cann, H.M.4
Kidd, K.K.5
-
37
-
-
66249116333
-
The genetic structure and history of Africans and African Americans
-
Tishkoff SA, Reed FA, Friedlaender FR, Ehret C, Ranciaro A, et al. (2009) The genetic structure and history of Africans and African Americans. Science 324: 1035-1044.
-
(2009)
Science
, vol.324
, pp. 1035-1044
-
-
Tishkoff, S.A.1
Reed, F.A.2
Friedlaender, F.R.3
Ehret, C.4
Ranciaro, A.5
-
38
-
-
79955103752
-
Hunter-gatherer genomic diversity suggests a southern African origin for modern humans
-
Henn BM, Gignoux CR, Jobin M, Granka JM, Macpherson JM, et al. (2011) Hunter-gatherer genomic diversity suggests a southern African origin for modern humans. Proc Natl Acad Sci USA 108: 5154-5162.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 5154-5162
-
-
Henn, B.M.1
Gignoux, C.R.2
Jobin, M.3
Granka, J.M.4
Macpherson, J.M.5
-
41
-
-
34249024363
-
The population history of the Xibe in northern China: a comparison of autosomal, mtDNA and Y-chromosomal analyses of migration and gene ow
-
Powell GT, Yang H, Tyler-Smith C, Xue Y, (2007) The population history of the Xibe in northern China: a comparison of autosomal, mtDNA and Y-chromosomal analyses of migration and gene ow. Forensic Sci Int Genet 1: 115-119.
-
(2007)
Forensic Sci Int Genet
, vol.1
, pp. 115-119
-
-
Powell, G.T.1
Yang, H.2
Tyler-Smith, C.3
Xue, Y.4
-
43
-
-
73349108482
-
A genealogical interpretation of principal components analysis
-
McVean G, (2009) A genealogical interpretation of principal components analysis. PLoS Genet 5: e1000686 doi:10.1371/journal.pgen.1000686.
-
(2009)
PLoS Genet
, vol.5
-
-
McVean, G.1
-
44
-
-
42649093791
-
Interpreting principal component analyses of spatial population genetic variation
-
Novembre J, Stephens M, (2008) Interpreting principal component analyses of spatial population genetic variation. Nature Genet 40: 646-649.
-
(2008)
Nature Genet
, vol.40
, pp. 646-649
-
-
Novembre, J.1
Stephens, M.2
-
45
-
-
84859527053
-
A population-genetic perspective on the similarities and differences among worldwide human populations
-
Rosenberg NA, (2011) A population-genetic perspective on the similarities and differences among worldwide human populations. Hum Biol 83: 659-684.
-
(2011)
Hum Biol
, vol.83
, pp. 659-684
-
-
Rosenberg, N.A.1
-
46
-
-
78049415423
-
Analysis of population structure: a unifying framework and novel methods based on sparse factor analysis
-
Engelhardt BE, Stephens M, (2010) Analysis of population structure: a unifying framework and novel methods based on sparse factor analysis. PLoS Genet 6: e1001117 doi:10.1371/journal.pgen.1001117.
-
(2010)
PLoS Genet
, vol.6
-
-
Engelhardt, B.E.1
Stephens, M.2
-
47
-
-
33750437374
-
Clines, clusters, and the effect of study design on the inference of human population structure
-
Rosenberg NA, Mahajan S, Ramachandran S, Zhao C, Pritchard JK, et al. (2005) Clines, clusters, and the effect of study design on the inference of human population structure. PLoS Genet 1doi:10.1371/journal.pgen.0010070.
-
(2005)
PLoS Genet
, vol.1
-
-
Rosenberg, N.A.1
Mahajan, S.2
Ramachandran, S.3
Zhao, C.4
Pritchard, J.K.5
-
48
-
-
84861597739
-
A model-based approach for analysis of spatial structure in genetic data
-
Yang WY, Novembre J, Eskin E, Halperin E, (2012) A model-based approach for analysis of spatial structure in genetic data. Nat Genet 44: 725-731.
-
(2012)
Nat Genet
, vol.44
, pp. 725-731
-
-
Yang, W.Y.1
Novembre, J.2
Eskin, E.3
Halperin, E.4
-
49
-
-
77957753324
-
Inference of unexpected genetic relatedness among individuals in HapMap Phase III
-
Pemberton TJ, Wang C, Li JZ, Rosenberg NA, (2010) Inference of unexpected genetic relatedness among individuals in HapMap Phase III. Am J Hum Genet 87: 457-464.
-
(2010)
Am J Hum Genet
, vol.87
, pp. 457-464
-
-
Pemberton, T.J.1
Wang, C.2
Li, J.Z.3
Rosenberg, N.A.4
-
50
-
-
50949096560
-
The Population Reference Sample, POPRES: a resource for population, disease, and pharmacological genetics research
-
Nelson MR, Bryc K, King KS, Indap A, Boyko AR, et al. (2008) The Population Reference Sample, POPRES: a resource for population, disease, and pharmacological genetics research. Am J Hum Genet 83: 347-358.
-
(2008)
Am J Hum Genet
, vol.83
, pp. 347-358
-
-
Nelson, M.R.1
Bryc, K.2
King, K.S.3
Indap, A.4
Boyko, A.R.5
-
51
-
-
34748848639
-
The NCBI dbGaP database of genotypes and phenotypes
-
Mailman MD, Feolo M, Jin Y, Kimura M, Tryka K, et al. (2007) The NCBI dbGaP database of genotypes and phenotypes. Nat Genet 39: 1181-1186.
-
(2007)
Nat Genet
, vol.39
, pp. 1181-1186
-
-
Mailman, M.D.1
Feolo, M.2
Jin, Y.3
Kimura, M.4
Tryka, K.5
-
52
-
-
33746512512
-
Principal components analysis corrects for stratification in genome-wide association studies
-
Price AL, Patterson NJ, Plenge RM, Weinblatt ME, Shadick NA, et al. (2006) Principal components analysis corrects for stratification in genome-wide association studies. Nature Genet 38: 904-909.
-
(2006)
Nature Genet
, vol.38
, pp. 904-909
-
-
Price, A.L.1
Patterson, N.J.2
Plenge, R.M.3
Weinblatt, M.E.4
Shadick, N.A.5
-
53
-
-
0003684449
-
-
New York: Springer, 2nd edition
-
Hastie T, Tibshirani R, Friedman J (2009) The Elements of Statistical Learning: Data Mining, Inference, and Prediction. New York: Springer, 2nd edition.
-
(2009)
The Elements of Statistical Learning: Data Mining, Inference, and Prediction
-
-
Hastie, T.1
Tibshirani, R.2
Friedman, J.3
-
54
-
-
0021566877
-
Estimating F-statistics for the analysis of population structure
-
Weir BS, Cockerham CC, (1984) Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
-
(1984)
Evolution
, vol.38
, pp. 1358-1370
-
-
Weir, B.S.1
Cockerham, C.C.2
|