Proteomic profiling of the photo-oxidation of silk fibroin: Implications for historic tin-weighted silk

Photochemistry and Photobiology

Volumn 88, Issue 5, 2012, Pages 1217-1226

  Solazzo, Caroline ^a,b   Dyer, Jolon M ^b,c,d   Deb Choudhury, Santanu ^b   Clerens, Stefan ^b   Wyeth, Paul ^e  

^a UNIVERSITY OF YORK   (United Kingdom)

^b AGRESEARCH LTD   (New Zealand)

^c UNIVERSITY OF CANTERBURY   (New Zealand)

^d RIDDET INSTITUTE   (New Zealand)

^e Cherish Consultancy   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

FIBROIN; TIN; TYROSINE;

AMINO ACID SEQUENCE; ANIMAL; BOMBYX; CHEMISTRY; COLOR; CONFERENCE PAPER; LIQUID CHROMATOGRAPHY; METHODOLOGY; MOLECULAR GENETICS; OXIDATION REDUCTION REACTION; PHOTOLYSIS; PHYSIOLOGY; PROTEOMICS; RADIATION EXPOSURE; TANDEM MASS SPECTROMETRY; TENSILE STRENGTH; TEXTILE; ULTRAVIOLET RADIATION;

AMINO ACID SEQUENCE; ANIMALS; BOMBYX; CHROMATOGRAPHY, LIQUID; COLOR; FIBROINS; MOLECULAR SEQUENCE DATA; OXIDATION-REDUCTION; PHOTOLYSIS; PROTEOMICS; TANDEM MASS SPECTROMETRY; TENSILE STRENGTH; TEXTILES; TIN; TYROSINE; ULTRAVIOLET RAYS;

EID: 84865968838     PISSN: 00318655     EISSN: 17511097     Source Type: Journal    
DOI: 10.1111/j.1751-1097.2012.01167.x     Document Type: Conference Paper

References (47)

1. Currie, R., (2001) Silk. In Silk, Mohair, Cashmere and other Luxury Fibres (Edited by, R. R. Franck,), pp. 1-67. Woodhead Publishing Limited, Cambride, England.
2. Federico, G., (1996) An econometric model of world silk production, 1870-1914. Explor. Econ. Hist. 33, 250-274. (Pubitemid 126171833)
3. Becker, M. A., Y. Magoshi, T. Sakai, and, N. C. Tuross, (1997) Chemical and physical properties of old silk fabrics. Stud. Conserv. 42, 27-37. (Pubitemid 127515404)
4. Becker, M. A., P. Willman, and, N. C. Tuross, (1995) The U.S. First ladies gowns: a biochemical study of silk preservation. J. Am. Inst. Conserv. 34, 141-152.
5. Pérez-Rigueiro, J., M. Elices, J. Llorca, and, C. Viney, (2002) Effect of degumming on the tensile properties of silkworm (Bombyx mori) silk fiber. J. Appl. Polym. Sci. 84, 1431-1437. (Pubitemid 34268518)
6. Garside, P., S. Lahlil, and, P. Wyeth, (2005) Characterization of historic silk by polarized attenuated total reflectance fourier transform infrared spectroscopy for informed conservation. Appl. Spectrosc. 59, 1242-1247. (Pubitemid 41568273)
7. Garside, P., P. Wyeth, and, X. Zhang, (2010) Understanding the ageing behaviour of nineteenth and twentieth century tin-weighted silks. J. Inst. Conserv. 33, 179-193.
8. Garside, P., P. Wyeth, and, X. Zhang, (2010) The inherent acidic characteristics of silk, part II-weighted silks. E-Pres. Sci. 7, 126-131.
9. Kim, J., and, P. Wyeth, (2009) Towards a routine methodology for assessing the condition of historic silk. E-Pres. Sci. 6, 60-67.
10. Miller, J. E., and, B. M. Reagan, (1989) Degradation in weighted and unweighted historic silks. J. Am. Inst. Conserv. 28, 97-115.
11. Garside, P., and, P. Wyeth, (2007) Crystallinity and degradation of silk: correlations between analytical signatures and physical condition on ageing. Appl. Phys. A 89, 871-876. (Pubitemid 47613066)
12. Wyeth, P., (2005) Signatures of ageing: correlations with behaviour. In Scientific Analysis of Ancient and Historic Textiles: Informing Preservation, Display and Interpretation (Edited by, P. Wyeth, and, R. Janaway,), pp. 137-142. Archetype Publications, London.
13. Zhang, X., I. Vanden Berghe, and, P. Wyeth, (2011) Heat and moisture promoted deterioration of raw silk estimated by amino acid analysis. J. Cult. Herit. 12, 408-411.
14. Dyer, J. M., S. D. Bringans, and, W. G. Bryson, (2006) Characterisation of photo-oxidation products within photoyellowed wool proteins: tryptophan and tyrosin derived chromophores. Photochem. Photobiol. Sci. 5, 698-706.
15. Dyer, J. M., S. D. Bringans, and, W. G. Bryson, (2006) Determination of photo-oxidation products within photoyellowed bleached wool proteins. Photochem. Photobiol. 82, 551-557.
16. Dyer, J. M., J. E. Plowman, G. L. Krsinic, S. Deb-Choudhury, H. Koehn, K. R. Millington, and, S. Clerens, (2010) Proteomic evaluation and location of UVB-induced photo-oxidation in wool. J. Photochem. Photobiol., B 98, 118-127.
17. Dyer, J. M., (2010) Protein photo-oxidative damage-consequences, characterisation and control. In Photobiology: Principles, Applications and Effects (Edited by, L. N. Collignon, and, C. B. Normand,), pp. 91-113. Nova Science Publishers, Inc., Hauppauge, New York.
18. Smith, G. J., (1995) New trends in photobiology (invited review). photodegradation of keratin and other structural proteins. J. Photochem. Photobiol., B 18, 7-198.
19. Zhang, P., Y. Aso, K. Yamamoto, Y. Banno, Y. Wang, K. Tsuchida, Y. Kawaguchi, and, H. Fujii, (2006) Proteome analysis of silk gland proteins from the silkworm, Bombyx mori. Proteomics 6, 2586-2599.
20. Jin, H.-J., and, D. L. Kaplan, (2003) Mechanism of silk processing in insects and spiders. Nature 424, 1057-1061. (Pubitemid 37064306)
21. Marsh, R. E., R. B. Corey, and, L. Pauling, (1955) An investigation of the structure of silk fibroin. Biochim. Biophys. Acta 16, 1-34.
22. Yamaguchi, K., Y. Kikuchi, T. Takagi, A. Kikuchi, F. Oyama, K. Shimura, and, S. Mizuno, (1989) Primary structure of the silk fibroin light chain determined by cDNA sequencing and peptide analysis. J. Mol. Biol. 210, 127-139. (Pubitemid 19286592)
23. Mita, K., S. Ichimura, and, T. C. James, (1994) Highly repetitive structure and its organization of the silk fibroin gene. J. Mol. Evol. 38, 583-592. (Pubitemid 24177291)
24. Zhou, C.-Z., F. Confalonieri, N. Medina, Y. Zivanovic, C. Esnault, T. Yang, M. Jacquet, J. Janin, M. Duguet, R. Perasso, and, Z.-G. Li, (2000) Fine organization of Bombyx mori fibroin heavy chain gene. Nucleic Acids Res. 28, 2413-2419. (Pubitemid 30349048)
25. Xia, Q., Z. Zhou, C. Lu, D. Cheng, F. Dai, B. Li, P. Zhao, X. Zha, T. Cheng, C. Chai, G. Pan, J. Xu, C. Liu, Y. Lin, J. Qian, Y. Hou, Z. Wu, G. Li, M. Pan, C. Li, Y. Shen, X. Lan, L. Yuan, T. Li, H. Xu, G. Yang, Y. Wan, Y. Zhu, M. Yu, W. Shen, D. Wu, Z. Xiang, J. Yu, J. Wang, R. Li, J. Shi, H. Li, G. Li, J. Su, X. Wang, G. Li, Z. Zhang, Q. Wu, J. Li, Q. Zhang, N. Wei, J. Xu, H. Sun, L. Dong, D. Liu, S. Zhao, X. Zhao, Q. Meng, F. Lan, X. Huang, Y. Li, L. Fang, C. Li, D. Li, Y. Sun, Z. Zhang, Z. Yang, Y. Huang, Y. Xi, Q. Qi, D. He, H. Huang, X. Zhang, Z. Wang, W. Li, Y. Cao, Y. Yu, H. Yu, J. Li, J. Ye, H. Chen, Y. Zhou, B. Liu, J. Wang, J. Ye, H. Ji, S. Li, P. Ni, J. Zhang, Y. Zhang, H. Zheng, B. Mao, W. Wang, C. Ye, S. Li, J. Wang, G. K.-S. Wong, and, H. Yang, (2004) A draft sequence for the genome of the domesticated silkworm (Bombyx mori). Science 306, 1937-1940. (Pubitemid 39627858)
26. Mita, K., M. Kasahara, S. Sasaki, Y. Nagayasu, T. Yamada, H. Kanamori, N. Namiki, M. Kitagawa, H. Yamashita, Y. Yasukochi, K. Kadono-Okuda, K. Yamamoto, M. Ajimura, G. Ravikumar, M. Shimomura, Y. Nagamura, T. Shin-i, H. Abe, T. Shimada, S. Morishita, and, T. Sasaki, (2004) The genome sequence of silkworm, Bombyx mori. DNA Res. 11, 27-35. (Pubitemid 40036632)
27. Zhou, Z., H. Yang, and, B.-x. Zhong, (2008) From genome to proteome: great progress in the domesticated silkworm (Bombyx mori L.). Acta Biochim. Biophys. Sin. 40, 601-611. (Pubitemid 352009076)
28. Li, X.-h., X.-f. Wu, W.-f. Yue, J.-m. Liu, G.-l. Li, and, Y.-g. Miao, (2006) Proteomic analysis of the silkworm (Bombyx mori L.) hemolymph during developmental stage. J. Proteome Res. 5, 2809-2814.
29. Wu, X.-f., X.-h. Li, W.-f. Yue, B. Roy, G.-l. Li, J.-m. Liu, B.-x. Zhong, Q.-k. Gao, W. C. C. David, and, Y.-g. Miao, (2009) Proteomic identification of the silkworm (Bombyx mori L.) prothoracic glands during the fifth instar stage. Bioscience Rep. 29, 121-129.
30. Jia, S.-h., M.-w. Li, B. Zhou, W.-b. Liu, Y. Zhang, X.-x. Miao, R. Zeng, and, Y.-p. Huang, (2007) Proteomic analysis of silk gland programmed cell death during metamorphosis of the silkworm Bombyx mori. J. Proteome Res. 6, 3003-3010. (Pubitemid 47310185)
31. Chen, W.-Q., H. Priewalder, J. P. P. John, and, G. Lubec, (2010) Silk cocoon of Bombyx mori: proteins and posttranslational modifications - heavy phosphorylation and evidence for lysine-mediated cross links. Proteomics 10, 369-379.
32. Zhang, P., K. Yamamoto, Y. Aso, Y. Banno, D. Sakano, Y. Wang, and, H. Fujii, (2005) Proteomic studies of isoforms of the P25 component of Bombyx mori fibroin. Biosci. Biotechnol. Biochem. 69, 2086-2093. (Pubitemid 41711830)
33. 2H NMR. Biochemistry 41, 4415-4424. (Pubitemid 34259886)
34. Ha, S.-W., H. S. Gracz, A. E. Tonelli, and, S. M. Hudson, (2005) Structural study of irregular amino acid sequences in the heavy chain of Bombyx mori silk fibroin. Biomacromolecules 6, 2563-2569. (Pubitemid 41388267)
35. Mondal, M., K. Trivedy, and, S. Nirmal Kumar, (2007) The silk proteins, sericin and fibroin in silkworm, Bombyx mori Linn.,-a review. Caspian J. Env. Sci. 5, 63-76.
36. Tanaka, K., N. Kajiyama, K. Ishikura, S. Waga, A. Kikuchi, K. Ohtomo, T. Takagi, and, S. Mizuno, (1999) Determination of the site of disulfide linkage between heavy and light chains of silk fibroin produced by Bombyx mori. Biochim. Biophys. Acta 1432, 92-103. (Pubitemid 29299235)
37. Inoue, S., K. Tanaka, F. Arisaka, S. Kimura, K. Ohtomo, and, S. Mizuno, (2000) Silk fibroin of Bombyx mori is secreted, assembling a high molecular mass elementary unit consisting of H-chain, L-chain, and P25, with a 6:6:1 molar ratio. J. Biol. Chem. 275, 40517-40528. (Pubitemid 32064689)
38. Sashina, E. S., A. M. Bochek, N. P. Novoselov, and, D. A. Kirichenko, (2006) Structure and solubility of natural silk fibroin. Russ. J. Appl. Chem. 79, 869-876.
39. Ajisawa, A., (1998) Dissolution of silk fibroin with calcium chloride/ethanol aqueous solution. J. Seric. Sci. Jpn 67, 91-94. (Pubitemid 28426553)
40. Li, M., M. Ogiso, and, N. Minoura, (2003) Enzymatic degradation behaviour of porous silk fibroin sheets. Biomaterials 24, 357-365. (Pubitemid 35292580)
41. Miyaguchi, Y., and, J. Hu, (2005) Physicochemical properties of silk fibroin after solubilization using calcium chloride with or without ethanol. Food Sci. Technol. Res. 11, 37-42. (Pubitemid 43062062)
42. Yamada, H., H. Nakao, Y. Takasu, and, K. Tsubouchi, (2001) Preparation of undegraded native molecular fibroin solution from silkworm cocoons. Mat. Sci. Eng. C 14, 41-46. (Pubitemid 32835994)
43. Dyer, J. M., C. D. Cornellison, S. D. Bringans, G. Maurdev, and, K. R. Millington, (2008) The photoyellowing of stilbene-derived fluorescent whitening agents-mass spectrometric characterization of yellow photoproducts. Photochem. Photobiol. 84, 145-153. (Pubitemid 350265086)
44. Grosvenor, A. J., J. D. Morton, and, J. M. Dyer, (2010) Profiling of residue-level photo-oxidative damage in peptides. Amino Acids 39, 285-296.
45. Arai, T., G. Freddi, R. Innocenti, and, M. Tsukada, (2004) Biodegradation of Bombyx mori silk fibroin fibers and films. J. Appl. Polym. Sci. 91, 2383-2390. (Pubitemid 38136702)
46. Dyer, J. M., S. Clerens, C. D. Cornellison, C. J. Murphy, G. Maurdev, and, K. R. Millington, (2009) Photoproducts formed in the photoyellowing of collagen in the presence of a fluorescent whitening agent. Photochem. Photobiol. 85, 1314-1321.
47. Atwood, C. S., G. Perry, H. Zeng, Y. Kato, W. D. Jones, K.-Q. Ling, X. Huang, R. D. Moir, D. Wang, L. M. Sayre, M. A. Smith, S. G. Chen, and, A. I. Bush, (2004) Copper mediates dityrosine cross-linking of Alzheimer's amyloid-β. Biochemistry 43, 560-568. (Pubitemid 38082580)