Differences in salinity tolerance and gene expression between two populations of atlantic cod (gadus morhua) in response to salinity stress

Biochemical Genetics

Volumn 50, Issue 5-6, 2012, Pages 454-466

  Larsen, P F ^a,b   Nielsen, E E ^b   Meier, K ^b   Olsvik, P A ^c   Hansen, M M ^a   Loeschcke, V ^a  

^a AARHUS UNIVERSITY   (Denmark)

^b TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

^c INSTITUTE OF MARINE RESEARCH   (Norway)

Author keywords

Gene expression variation; Population structure; Salinity gradient; Salinity tolerance

Indexed keywords

HEAT SHOCK PROTEIN 70;

ANIMAL TISSUE; ARTICLE; ATLANTIC COD; CONTROLLED STUDY; DNA SEQUENCE; ENVIRONMENTAL FACTOR; GENE; GENE CONTROL; GENE EXPRESSION; GENE IDENTIFICATION; GENETIC VARIABILITY; GENOTYPE ENVIRONMENT INTERACTION; HEAT SHOCK PROTEIN 70 GENE; INTRASPECIFIC VARIATION; MORTALITY; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; POPULATION DIFFERENTIATION; QUANTITATIVE ANALYSIS; SALT STRESS; SALT TOLERANCE; SEQUENCE ANALYSIS; SODIUM POTASSIUM ATPASE ALPHA GENE;

ANIMALS; FISH PROTEINS; GADUS MORHUA; GENE EXPRESSION; GENETIC VARIATION; GILLS; SALINITY; SALT-TOLERANCE; SODIUM-POTASSIUM-EXCHANGING ATPASE;

GADUS CALLARIAS; GADUS MORHUA;

EID: 84865963062     PISSN: 00062928     EISSN: 15734927     Source Type: Journal    
DOI: 10.1007/s10528-011-9490-0     Document Type: Article

References (49)

1. Babu MM, Aravind L (2006) Adaptive evolution by optimizing expression levels in different environments. Trends Microbiol 14:11-14
2. Basu N, Nakano T, Grau EG, Iwama GK (2001) The effects of cortisol on heat shock protein 70 levels in two fish species. Gen Comp Endocrinol 124:97-105
3. Cossins AR, Crawford DL (2005) Opinion: Fish as models for environmental genomics. Nature Rev Genet 6:324-333
4. Deane EE, Woo NYS (2004) Differential gene expression associated with euryhalinity in sea bream (Sparus sarba). Am J Physiol Regul Integr Comp Physiol 287:R1054-R1063
5. Deane EE, Kelly SP, Luk JCY, Woo NYS (2002) Chronic salinity adaptation modulates hepatic heat shock protein and insulin-like growth factor I expression in black sea bream. Mar Biotechnol 4: 193-205
6. DeLong EF, Karl DM (2005) Genomic perspectives in microbial oceanography. Nature 437:336-342
7. Doebeli M, Dieckmann U (2003) Speciation along environmental gradients. Nature 421:259-264
8. Evans DH, Piermarini PM, Choe KP (2005) The multifunctional fish gill: Dominant site of gas exchange, osmoregulation, acid-base regulation, and excretion of nitrogenous waste. Physiol Rev 85:97-177
9. Fangue NA, Hofmeister M, Schulte PM (2006) Intraspecific variation in thermal tolerance and heat shock protein gene expression in common killifish, Fundulus heteroclitus. J Exp Biol 209:2859-2872
10. Garcia de Leaniz C, Fleming IA, Einum S, Verspoor E, Jordan WC, Consuegra S, Aubin-Horth N, Lajus D, Letcher BH, Youngson AF, Webb JH, Vøllestad LA, Villanueva B, Ferguson A, Quinn TP (2007) A critical review of adaptive genetic variation in Atlantic salmon: Implications for conservation. Biol Rev 82:173-211
11. Gilad Y, Oshlack A, Rifkin SA (2006) Natural selection on gene expression. Trends Genet 22:456-461
12. Goetz FW, MacKenzie S (2008) Functional genomics with microarrays in fish biology and fisheries. Fish Fish 9:378-395
13. Hammer O, Harper DAT, Ryan PD (2001) PAST: Paleontological statistics software package for education and data analysis. Palaeontologia Electronica 4:1-4
14. Johannesson K, Andre C (2006) Life on the margin: Genetic isolation and diversity loss in a peripheral marine ecosystem, the Baltic Sea. Mol Ecol 15:2013-2029
15. Larsen PF, Nielsen EE, Williams TD, Hemmer-Hansen J, Chipman JK, Kruhøffer M, Grønkjaer P, George SG, Dyrskjøt L, Loeschcke V (2007) Adaptive differences in gene expression in European flounder (Platichthys flesus). Mol Ecol 16:4674-4683
16. Larsen PF, Nielsen EE, Koed A, Thomsen DS, Olsvik PA, Loeschcke V (2008a) Interpopulation differences in expression of candidate genes for salinity tolerance in winter migrating anadromous brown trout (Salmo trutta L.). BMC Genetics 9:12
17. Larsen PF, Nielsen EE, Williams TD, Loeschcke V (2008b) Intraspecific variation in expression of candidate genes for osmoregulation, heme biosynthesis and stress resistance suggests local adaptation in European flounder (Platichthys flesus). Heredity 101:247-259
18. Larsen PF, Schulte PM, Nielsen EE (2011) Gene expression analysis for identification of selection and local adaptation in fishes. J Fish Biol 78:1-22
19. Lee CE, Petersen CH (2002) Genotype-by-environment interaction for salinity tolerance in the freshwater-invading copepod Eurytemora affinis. Physiol Biochem Zool 75:335-344
20. Lejeusne C, Perez T, Sarrazin V, Chevaldonne P (2006) Baseline expression of heat-shock proteins (HSPs) of a ''thermotolerant'' Mediterranean marine species largely influenced by natural temperature fluctuations. Can J Fish Aquat Sci 63:2028-2037
21. Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(T)(-Delta Delta C) method. Methods 25:402-408
22. Marcil J, Swain DP, Hutchings JA (2006) Countergradient variation in body shape between two populations of Atlantic cod (Gadus morhua). Proc Royal Soc B Biol Sci 273:217-223
23. McCormick SD (2001) Endocrine control of osmoregulation in teleost fish. Am Zoologist 41:781-794
24. McKay JK, Bishop JG, Lin JZ, Richards JH, Sala A, Mitchell-Olds T (2001) Local adaptation across a climatic gradient despite small effective population size in the rare sapphire rockcress. Proc Royal Soc B Biol Sci 268:1715-1721
25. Nielsen EE, Hansen MM, Bach L (2001a) Looking for a needle in a haystack: Discovery of indigenous salmon in heavily stocked populations. Conserv Genet 2:219-232
26. Nielsen EE, Hansen MM, Schmidt C, Meldrup D, Gronkjaer P (2001b) Fisheries: Population of origin of Atlantic cod. Nature 413:272-272
27. Nielsen EE, Hansen MM, Ruzzante DE, Meldrup D, Gronkjaer P (2003) Evidence of a hybrid-zone in Atlantic cod (Gadus morhua) in the Baltic and the Danish Belt Sea revealed by individual admixture analysis. Mol Ecol 12:1497-1508
28. Nielsen EE, Gronkjaer P, Meldrup D, Paulsen H (2005) Retention of juveniles within a hybrid zone between North Sea and Baltic Sea Atlantic cod (Gadus morhua). Can J Fish Aquat Sci 62: 2219-2225
29. Nissling A, Westin L (1997) Salinity requirements for successful spawning of Baltic and Belt Sea cod and the potential for cod stock interactions in the Baltic Sea. Marine Ecol Progress Series 152:261-271
30. Oleksiak MF, Churchill GA, Crawford DL (2002) Variation in gene expression within and among natural populations. Nat Genet 32:261-266
31. Ottera H, Agnalt AL, Jorstad KE (2006) Differences in spawning time of captive Atlantic cod from four regions of Norway, kept under identical conditions. Ices J Marine Sci 63:216-223
32. Poulsen NA, Nielsen EE, Schierup MH, Loeschcke V, Gronkjaer P (2006) Long-term stability and effective population size in North Sea and Baltic Sea cod (Gadus morhua). Mol Ecol 15:321-331
33. Rozen SS, Skaletsky HJ (2000) Primer3 on the WWW for general users and for biologist programmers. 365-386
34. Sangiao-Alvarellos S, Laiz-Carrion R, Guzman JM, Martin del Rio MP, Miguez JM, Mancera JM, Soengas JL (2003) Acclimation of S-aurata to various salinities alters energy metabolism of osmoregulatory and nonosmoregulatory organs. Am J Physiol Regul Integr Comp Physiol 285: R897-R907
35. Sangiao-Alvarellos S, Arjona FJ, Martin del Rio MP, Miguez JM, Mancera JM, Soengas JL (2005) Time course of osmoregulatory and metabolic changes during osmotic acclimation in Sparus auratus. J Exp Biol 208:4291-4304
36. Schulte PM (2001) Environmental adaptations as windows on molecular evolution. Comp Biochem Physiol B Biochem Mol Biol 128:597-611
37. Schulte PM (2007) Responses to environmental stressors in an estuarine fish: Interacting stressors and the impacts of local adaptation. J Thermal Biol 32:152-161
38. Scott GR, Schulte PM (2005) Intraspecific variation in gene expression after seawater transfer in gills of the euryhaline killifish Fundulus heteroclitus. Comp Biochem Physiol A Mol Integr Physiol 141:176-182
39. Scott GR, Rogers JT, Richards JG, Wood CA, Schulte PM (2004) Intraspecific divergence of ionoregulatory physiology in the euryhaline teleost Fundulus heteroclitus: Possible mechanisms of freshwater adaptation. J Exp Biol 207:3399-3410
40. Sick K (1965) Haemoglobin polymorphism of cod in the Baltic and Danish Belt Sea. Hereditas-Genetiskt Arkiv 54:19
41. Smith TR, Tremblay GC, Bradley TM (1999) Hsp70 and a 54 kDa protein (Osp54) are induced in salmon (Salmo salar) in response to hyperosmotic stress. J Exp Zool 284:286-298
42. Stahlberg A, Hakansson J, Xian XJ, Semb H, Kubista M (2004) Properties of the reverse transcription reaction in mRNA quantification. Clinical Chem 50:509-515
43. Svedang H, Svenson A (2006) Cod Gadus morhua L. populations as behavioural units: Inference from time series on juvenile abundance in the eastern Skagerrak. J Fish Biol 69:151-164
44. Vasemägi A, Primmer CR (2005) Challenges for identifying functionally important genetic variation: The promise of combining complementary research strategies. Mol Ecol 14:3623-3642
45. Waples RS (1998) Separating the wheat from the chaff: Patterns of genetic differentiation in high gene flow species. J Heredity 89:438-450
46. West-Eberhard MJ (2005) Developmental plasticity and the origin of species differences. Proc Natl Acad Sci USA 102:6543-6549
47. Whitehead A (2009) Comparative mitochondrial genomics within and among species of killifish. BMC Evol Biol 9
48. Whitehead A (2010) The evolutionary radiation of diverse osmotolerant physiologies in killifish (Fundulus sp.). Evolution 64:2070-2085
49. Whitehead A, Crawford DL (2006) Neutral and adaptive variation in gene expression. Proc Natl Acad Sci USA 103:5425-5430