메뉴 건너뛰기




Volumn 12, Issue 8, 2012, Pages 1759-1769

Influence of evolutionary events on the Indian subcontinent on the phylogeography of dengue type 3 and 4 viruses

Author keywords

DENV 3; DENV 4; Evolution; India; Phylogeography; Recombination

Indexed keywords

AMINO ACID SUBSTITUTION; ANIMAL TISSUE; ARTICLE; DENGUE VIRUS 3; DENGUE VIRUS 4; EVOLUTION; GENE SEQUENCE; GENETIC VARIABILITY; GENOTYPE; INDIA; LAST COMMON ANCESTOR; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGEOGRAPHY; POPULATION DISPERSION; POPULATION DYNAMICS; PRIORITY JOURNAL; SRI LANKA; VIRUS ENVELOPE;

EID: 84865857144     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2012.07.009     Document Type: Article
Times cited : (30)

References (49)
  • 1
    • 0036787144 scopus 로고    scopus 로고
    • Emergence of dengue virus type 4 genotype IIA in Malaysia
    • AbuBakar S., Wong P.F., Chan Y.F. Emergence of dengue virus type 4 genotype IIA in Malaysia. J. Gen. Virol. 2002, 83(10):2437-2442.
    • (2002) J. Gen. Virol. , vol.83 , Issue.10 , pp. 2437-2442
    • AbuBakar, S.1    Wong, P.F.2    Chan, Y.F.3
  • 4
    • 2342454850 scopus 로고
    • Dengue Types 1 and 4 Viruses in Wild-Caught Mosquitoes in South India
    • Carey D.E., Myers R.M., Reuben R. Dengue Types 1 and 4 Viruses in Wild-Caught Mosquitoes in South India. Science 1964, 143(3602):131-132.
    • (1964) Science , vol.143 , Issue.3602 , pp. 131-132
    • Carey, D.E.1    Myers, R.M.2    Reuben, R.3
  • 6
    • 0030764559 scopus 로고    scopus 로고
    • Dengue virus infectivity depends on envelope protein binding to target cell heparan sulfate
    • Chen Y., Maguire T., Hileman R.E., Fromm J.R., Esko J.D., Linhardt R.J., Marks R.M. Dengue virus infectivity depends on envelope protein binding to target cell heparan sulfate. Nat. Med. 1997, 3(8):866-871.
    • (1997) Nat. Med. , vol.3 , Issue.8 , pp. 866-871
    • Chen, Y.1    Maguire, T.2    Hileman, R.E.3    Fromm, J.R.4    Esko, J.D.5    Linhardt, R.J.6    Marks, R.M.7
  • 7
    • 33750724111 scopus 로고    scopus 로고
    • Cocirculation of dengue serotypes, Delhi, India, 2003
    • Dar L., Gupta E., Narang P., Broor S. Cocirculation of dengue serotypes, Delhi, India, 2003. Emerg. Infect. Dis. 2006, 12(2):352-353.
    • (2006) Emerg. Infect. Dis. , vol.12 , Issue.2 , pp. 352-353
    • Dar, L.1    Gupta, E.2    Narang, P.3    Broor, S.4
  • 8
    • 4344615912 scopus 로고    scopus 로고
    • Emergence and continued circulation of dengue-2 (genotype IV) virus strains in northern India
    • Dash P.K., Parida M.M., Saxena P., Kumar M., Rai A., Pasha S.T., Jana A.M. Emergence and continued circulation of dengue-2 (genotype IV) virus strains in northern India. J. Med. Virol. 2004, 74(2):314-322.
    • (2004) J. Med. Virol. , vol.74 , Issue.2 , pp. 314-322
    • Dash, P.K.1    Parida, M.M.2    Saxena, P.3    Kumar, M.4    Rai, A.5    Pasha, S.T.6    Jana, A.M.7
  • 11
    • 81855176394 scopus 로고    scopus 로고
    • Genotypic and phenotypic characteristics of DENV-3 isolated from patients with different disease severities in Indonesia
    • Dewi, B, E., Tomohiko, T., Shigeru, T., T Mirawati, S., R.P. Larasati c., Andrew, L., C., and Ichiro K., 2009. Genotypic and phenotypic characteristics of DENV-3 isolated from patients with different disease severities in Indonesia. Dengue Bulletin - Vol. 33.
    • (2009) Dengue Bulletin. , vol.33
    • Dewi, B.E.1    Tomohiko, T.2    Shigeru, T.T.3    Mirawati, S.R.P.4    Larasati, C.5    Andrew, L.C.6    Ichiro, K.7
  • 13
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond A.J., Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 2007, 7:214.
    • (2007) BMC Evol. Biol. , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 15
    • 33751194450 scopus 로고    scopus 로고
    • The changing epidemiology of dengue in Delhi India
    • Gupta E., Dar L., Kapoor G., Broor S. The changing epidemiology of dengue in Delhi India. J. Virol. 2006, 5(3):92.
    • (2006) J. Virol. , vol.5 , Issue.3 , pp. 92
    • Gupta, E.1    Dar, L.2    Kapoor, G.3    Broor, S.4
  • 16
    • 78149255559 scopus 로고    scopus 로고
    • Emergence of the asian 1 genotype of dengue virus serotype 2 in Viet Nam: in vivo fitness advantage and lineage replacement in South-East Asia
    • Hang T.V., Holmes E.C., Veasna D., Quy N.T., Tinh H.T. Emergence of the asian 1 genotype of dengue virus serotype 2 in Viet Nam: in vivo fitness advantage and lineage replacement in South-East Asia. PLoS Negl. Trop. Dis. 2010, 4(7):e757.
    • (2010) PLoS Negl. Trop. Dis. , vol.4 , Issue.7
    • Hang, T.V.1    Holmes, E.C.2    Veasna, D.3    Quy, N.T.4    Tinh, H.T.5
  • 17
    • 33749042583 scopus 로고    scopus 로고
    • Flavivirus membrane fusion
    • Heinz F.X., Stiasny K. Flavivirus membrane fusion. J. Gen. Virol. 2006, 87:2755-2766.
    • (2006) J. Gen. Virol. , vol.87 , pp. 2755-2766
    • Heinz, F.X.1    Stiasny, K.2
  • 18
    • 84868204253 scopus 로고
    • Experimental inoculation of dengue virus into mice
    • Kimura R., Hotta S. Experimental inoculation of dengue virus into mice. Nippon Igaku. 1943, 3344:1378-1379.
    • (1943) Nippon Igaku. , vol.3344 , pp. 1378-1379
    • Kimura, R.1    Hotta, S.2
  • 19
    • 17744395033 scopus 로고    scopus 로고
    • Datamonkey: rapid detection of selective pressure on individual sites of codon alignments
    • Kosakovsky-Pond S.L., Frost S.D.W. Datamonkey: rapid detection of selective pressure on individual sites of codon alignments. Bioinformatics 2005, 21:2531-2533.
    • (2005) Bioinformatics , vol.21 , pp. 2531-2533
    • Kosakovsky-Pond, S.L.1    Frost, S.D.W.2
  • 22
    • 0030886723 scopus 로고    scopus 로고
    • Molecular evolution and phylogeny of dengue-4 viruses
    • Lanciotti R.S., Gubler D.J., Trent D.W. Molecular evolution and phylogeny of dengue-4 viruses. J. Gen. Virol. 1997, 78(9):2279-2284.
    • (1997) J. Gen. Virol. , vol.78 , Issue.9 , pp. 2279-2284
    • Lanciotti, R.S.1    Gubler, D.J.2    Trent, D.W.3
  • 23
    • 70349675664 scopus 로고    scopus 로고
    • Bayesian phylogeography finds its roots
    • Sep; e1000520. Epub 2009 Sep 25.
    • Lemey, P., Rambaut, A, Drummond, A., J., Suchard, M., A., 2009. Bayesian phylogeography finds its roots. PLoS Comput Biol. Sep; 5(9):e1000520. Epub 2009 Sep 25.
    • (2009) PLoS Comput Biol. , vol.5 , Issue.9
    • Lemey, P.1    Rambaut, A.2    Drummond, A.J.3    Suchard, M.A.4
  • 24
    • 0032889281 scopus 로고    scopus 로고
    • Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination
    • Lole K.S., Bollinger R.C., Paranjape R.S., Gadkari D., Kulkarni S.S., Novak N.G., Ingersoll R., Sheppard H.W., Ray S.C. Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J. Virol. 1999, 73:152-160.
    • (1999) J. Virol. , vol.73 , pp. 152-160
    • Lole, K.S.1    Bollinger, R.C.2    Paranjape, R.S.3    Gadkari, D.4    Kulkarni, S.S.5    Novak, N.G.6    Ingersoll, R.7    Sheppard, H.W.8    Ray, S.C.9
  • 25
    • 34447637159 scopus 로고    scopus 로고
    • Computational analysis and identification of amino acid sites in dengue E proteins relevant to development of diagnostics and vaccines
    • Mazumder R., Hu Z.Z., Vinayaka C.R., Sagripanti J.L., Frost S.D., Kosakovsky-Pond S.L., Wu.C.H. Computational analysis and identification of amino acid sites in dengue E proteins relevant to development of diagnostics and vaccines. Virus Genes 2007, 35(2):175-186.
    • (2007) Virus Genes , vol.35 , Issue.2 , pp. 175-186
    • Mazumder, R.1    Hu, Z.Z.2    Vinayaka, C.R.3    Sagripanti, J.L.4    Frost, S.D.5    Kosakovsky-Pond, S.L.6    Wu, C.H.7
  • 26
    • 65549101065 scopus 로고    scopus 로고
    • Introduction of dengue virus 4 (DENV-4) genotype I into brazil from asia?
    • Melo F.L., Camila M.R., Paolo M., Zanotto A. Introduction of dengue virus 4 (DENV-4) genotype I into brazil from asia?. PLoS Negl. Trop. Dis. 2009, 3(4):e390.
    • (2009) PLoS Negl. Trop. Dis. , vol.3 , Issue.4
    • Melo, F.L.1    Camila, M.R.2    Paolo, M.3    Zanotto, A.4
  • 29
    • 0014742281 scopus 로고
    • Dengue outbreak in Vellore, Sourthern India, in 1968, with isolation of four dengue types from man and mosquitoes
    • Meyers R.M., Varkey M.J., Reuben R., Jesudas E.S. Dengue outbreak in Vellore, Sourthern India, in 1968, with isolation of four dengue types from man and mosquitoes. Indian J. Med. Res. 1970, 58:168-173.
    • (1970) Indian J. Med. Res. , vol.58 , pp. 168-173
    • Meyers, R.M.1    Varkey, M.J.2    Reuben, R.3    Jesudas, E.S.4
  • 30
    • 84868204250 scopus 로고    scopus 로고
    • Pan American Health Organization, Regional Program on Dengue through the PAHO/WHO Representation in Paraguay (PAHO-Paraguay). Ministry of Public Health and SocialWelfare (Ministerio de Salud Publica y Bienestar Social/ MSPBS) of Paraguay in EID Updates, Region of the Americas, Dengue Outbreak Continues to Subside in Paraguay. Emerging and Reemerging Infectious Diseases 4
    • Pan American Health Organization, Regional Program on Dengue through the PAHO/WHO Representation in Paraguay (PAHO-Paraguay). Ministry of Public Health and SocialWelfare (Ministerio de Salud Publica y Bienestar Social/ MSPBS) of Paraguay in EID Updates, Region of the Americas, 2007. Dengue Outbreak Continues to Subside in Paraguay. Emerging and Reemerging Infectious Diseases 4.
    • (2007)
  • 35
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: testing the model of DNA substitution
    • Posada D., Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics 1998, 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 38
    • 74049115561 scopus 로고    scopus 로고
    • Dengue virus virulence and transmission determinants
    • Review
    • Rico-Hesse R. Dengue virus virulence and transmission determinants. Curr. Top. Microbiol. Immunol. 2010, 338:45-55. Review.
    • (2010) Curr. Top. Microbiol. Immunol. , vol.338 , pp. 45-55
    • Rico-Hesse, R.1
  • 39
    • 76949113583 scopus 로고
    • Research on Dengue during World War II
    • Sabin A.B. Research on Dengue during World War II. Am. J. Trop. Med. Hyg. 1952, 1:30-50.
    • (1952) Am. J. Trop. Med. Hyg. , vol.1 , pp. 30-50
    • Sabin, A.B.1
  • 40
    • 0028793170 scopus 로고
    • Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning
    • Salminen M.O., Carr J.K., Burke D.S., McCutchan F.E. Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning. AIDS Res. Hum. Retroviruses 1995, 11:1423-1425.
    • (1995) AIDS Res. Hum. Retroviruses , vol.11 , pp. 1423-1425
    • Salminen, M.O.1    Carr, J.K.2    Burke, D.S.3    McCutchan, F.E.4
  • 41
    • 79959291040 scopus 로고    scopus 로고
    • Comparative complete genome analysis of dengue virus type 3 circulating in India between 2003 and 2008
    • Sharma S., Dash P.K., Agarwal S., Shukla J., Parida M.M., Rao P.V. Comparative complete genome analysis of dengue virus type 3 circulating in India between 2003 and 2008. J. Gen. Virol. 2011, 92(7):1595-1600.
    • (2011) J. Gen. Virol. , vol.92 , Issue.7 , pp. 1595-1600
    • Sharma, S.1    Dash, P.K.2    Agarwal, S.3    Shukla, J.4    Parida, M.M.5    Rao, P.V.6
  • 42
    • 0034983646 scopus 로고    scopus 로고
    • Bayesian selection of continuoustime Markov chain evolutionary models
    • Suchard M.A., Weiss R.E., Sinsheimer J.S. Bayesian selection of continuoustime Markov chain evolutionary models. Mol. Biol. Evol. 2001, 18:1001-1013.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 1001-1013
    • Suchard, M.A.1    Weiss, R.E.2    Sinsheimer, J.S.3
  • 43
    • 84963178774 scopus 로고
    • Further analysis of the data by Akaike's information criterion and the finite corrections
    • Sugiura N. Further analysis of the data by Akaike's information criterion and the finite corrections. Comm. Statist. 1978, 7:13-26.
    • (1978) Comm. Statist. , vol.7 , pp. 13-26
    • Sugiura, N.1
  • 44
    • 0037229543 scopus 로고    scopus 로고
    • Inferring the rate and time scale of dengue virus evolution
    • Twiddy S.S., Holmes E.C., Rambaut A. Inferring the rate and time scale of dengue virus evolution. Mol. Biol. Evol. 2003, 20:122-129.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 122-129
    • Twiddy, S.S.1    Holmes, E.C.2    Rambaut, A.3
  • 45
    • 79956331654 scopus 로고    scopus 로고
    • Evolutionary history of Dengue virus type 4: insights into genotype phylodynamics
    • Villabona-Arenas C.J., Zanotto P.M. Evolutionary history of Dengue virus type 4: insights into genotype phylodynamics. Infect. Genet. Evol. 2011, 11(5):878-885.
    • (2011) Infect. Genet. Evol. , vol.11 , Issue.5 , pp. 878-885
    • Villabona-Arenas, C.J.1    Zanotto, P.M.2
  • 46
    • 0032853634 scopus 로고    scopus 로고
    • Evolutionary aspects of recombination in RNA viruses
    • Worobey M., Holmes E.C. Evolutionary aspects of recombination in RNA viruses. J. Gen. Virol. 1999, 80:2535-2543.
    • (1999) J. Gen. Virol. , vol.80 , pp. 2535-2543
    • Worobey, M.1    Holmes, E.C.2
  • 47
    • 0033594983 scopus 로고    scopus 로고
    • Widespread intra-serotype recombination in natural populations of dengue virus
    • Worobey M., Rambaut A., Holmes E.C. Widespread intra-serotype recombination in natural populations of dengue virus. Proc. Nat. Acad. Sci. USA 1999, 96:7352-7357.
    • (1999) Proc. Nat. Acad. Sci. USA , vol.96 , pp. 7352-7357
    • Worobey, M.1    Rambaut, A.2    Holmes, E.C.3
  • 48
    • 42149088420 scopus 로고    scopus 로고
    • Phylogeny of dengue viruses circulating in Jeddah, Saudi Arabia: 1994 to 2006
    • Zaki A., Perera D., Jahan S.S., Cardosa M.J. Phylogeny of dengue viruses circulating in Jeddah, Saudi Arabia: 1994 to 2006. Trop. Med. Int. Health 2008, 13:584-592.
    • (2008) Trop. Med. Int. Health , vol.13 , pp. 584-592
    • Zaki, A.1    Perera, D.2    Jahan, S.S.3    Cardosa, M.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.