메뉴 건너뛰기




Volumn 39, Issue 6, 2012, Pages 581-590

A novel scale-free network construction method and its application in gene expression profiles simulation

Author keywords

Differential equation; Gene expression profiles; Heuristic search algorithm; Reconnection; Scale free network

Indexed keywords


EID: 84865578242     PISSN: 10003282     EISSN: None     Source Type: Journal    
DOI: 10.3724/SP.J.1206.2011.00311     Document Type: Article
Times cited : (3)

References (28)
  • 2
    • 65249156953 scopus 로고    scopus 로고
    • An evolutionary model for the origin of modularity in a complex gene network
    • Gu X. An evolutionary model for the origin of modularity in a complex gene network. J Experimental Zoology Part B-Molecular and Developmental Evolution, 2009, 312B( 2): 75-82
    • (2009) J Experimental Zoology Part B-Molecular and Developmental Evolution , vol.312 B , Issue.2 , pp. 75-82
    • Gu, X.1
  • 4
    • 42249090061 scopus 로고    scopus 로고
    • Weighted scale-free networks with variable power-law exponents
    • Tanaka T, Aoyagi T. Weighted scale-free networks with variable power-law exponents. Physica D-Nonlinear Phenomena, 2008, 237( 7): 898-907
    • (2008) Physica D-Nonlinear Phenomena , vol.237 , Issue.7 , pp. 898-907
    • Tanaka, T.1    Aoyagi, T.2
  • 5
    • 0038483826 scopus 로고    scopus 로고
    • Emergence of scaling in random networks
    • Barabasi A L, Albert R. Emergence of scaling in random networks. Science, 1999, 286( 5439): 509-512
    • (1999) Science , vol.286 , Issue.5439 , pp. 509-512
    • Barabasi, A.L.1    Albert, R.2
  • 6
    • 9744225341 scopus 로고    scopus 로고
    • Bose-Einstein condensation in complex networks
    • DOI 10.1103/PhysRevLett.86.5632
    • Bianconi G, Barabasi A L. Bose-Einstein condensation in complex networks. Physical Review Letters, 2001, 86(24): 5632-5635 (Pubitemid 32548982)
    • (2001) Physical Review Letters , vol.86 , Issue.24 , pp. 5632-5635
    • Bianconi, G.1    Barabasi, A.-L.2
  • 8
    • 84876075930 scopus 로고    scopus 로고
    • Gene regulatory network reconstruction of P38 MAPK pathway using ordinary differential equation with linear regression analysis
    • Zheng M, Liu G X, Wang H, et al. Gene regulatory network reconstruction of P38 MAPK pathway using ordinary differential equation with linear regression analysis. Advances in Computational Intelligence, 2009, 116( 61): 299-308
    • (2009) Advances in Computational Intelligence , vol.116 , Issue.61 , pp. 299-308
    • Zheng, M.1    Liu, G.X.2    Wang, H.3
  • 9
    • 61349180117 scopus 로고    scopus 로고
    • Gene regulatory network inference: Data integration in dynamic models-A review
    • Hecker M, Lambeck S, Toepfer S, et al. Gene regulatory network inference: Data integration in dynamic models-A review. Biosystems, 2009, 96( 1): 86-103
    • (2009) Biosystems , vol.96 , Issue.1 , pp. 86-103
    • Hecker, M.1    Lambeck, S.2    Toepfer, S.3
  • 12
    • 34547747231 scopus 로고    scopus 로고
    • P53 anti-tumor research in bel-7402 by using human-derived vector
    • Zhi-Gang X, Jian L, Biao Y, et al. p53 anti-tumor research in bel-7402 by using human-derived vector. Prog Biochem Biophys, 2007, 34( 5): 465-470
    • (2007) Prog Biochem Biophys , vol.34 , Issue.5 , pp. 465-470
    • Zhi-Gang, X.1    Jian, L.2    Biao, Y.3
  • 13
    • 67349182652 scopus 로고    scopus 로고
    • Time series analysis of categorical data using auto-mutual information
    • Biswas A, Guha A. Time series analysis of categorical data using auto-mutual information. J Statistical Planning and Inference, 2009, 139( 9): 3076-3087
    • (2009) J Statistical Planning and Inference , vol.139 , Issue.9 , pp. 3076-3087
    • Biswas, A.1    Guha, A.2
  • 14
    • 41349122398 scopus 로고    scopus 로고
    • Scale-free network with boolean dynamics as a function of connectivity
    • Silva A C E, da Silva J K L, Mendes J F F. Scale-free network with boolean dynamics as a function of connectivity. Physical Review E, 2004, 70( 6): 066140
    • (2004) Physical Review e , vol.70 , Issue.6 , pp. 066140
    • Silva, A.C.E.1    Da Silva, J.K.L.2    Mendes, J.F.F.3
  • 16
    • 4644313517 scopus 로고    scopus 로고
    • First and second order markov chain models for synthetic generation of wind speed time series
    • DOI 10.1016/j.energy.2004.05.026, PII S0360544204002609
    • Shamshad A, Bawadi M A, Hussin W M A W, et al. First and second order Markov chain models for synthetic generation of wind speed time series. Energy, 2005, 30(5): 693-708 (Pubitemid 39333086)
    • (2005) Energy , vol.30 , Issue.5 , pp. 693-708
    • Shamshad, A.1    Bawadi, M.A.2    Wan, H.W.M.A.3    Majid, T.A.4    Sanusi, S.A.M.5
  • 17
    • 79959836283 scopus 로고    scopus 로고
    • An image segmentation based on a genetic algorithm for determining soil coverage by crop residues
    • Ribeiro A, Ranz J, Burgos-Artizzu X P, et al. An image segmentation based on a genetic algorithm for determining soil coverage by crop residues. Sensors, 2011, 11( 6): 6480-6492
    • (2011) Sensors , vol.11 , Issue.6 , pp. 6480-6492
    • Ribeiro, A.1    Ranz, J.2    Burgos-Artizzu, X.P.3
  • 18
    • 79955662261 scopus 로고    scopus 로고
    • The reconstruction of particle size distributions from dynamic light scattering data using particle swarm optimization techniques with different objective functions
    • Zhu X J, Shen J, Wang Y L, et al. The reconstruction of particle size distributions from dynamic light scattering data using particle swarm optimization techniques with different objective functions. Optics and Laser Technology, 2011, 43( 7): 1128-1137
    • (2011) Optics and Laser Technology , vol.43 , Issue.7 , pp. 1128-1137
    • Zhu, X.J.1    Shen, J.2    Wang, Y.L.3
  • 19
    • 67649933384 scopus 로고    scopus 로고
    • Least-square regularized regression with non-iid sampling
    • Pan Z W, Xiao Q W. Least-square regularized regression with non-iid sampling. J Statistical Planning and Inference, 2009, 139( 10): 3579-3587
    • (2009) J Statistical Planning and Inference , vol.139 , Issue.10 , pp. 3579-3587
    • Pan, Z.W.1    Xiao, Q.W.2
  • 21
    • 79951637617 scopus 로고    scopus 로고
    • Boolean network and dimmelian tie in the co-author model: A study of dynamics and structure of a strategic alliance model
    • Tambayong L. Boolean network and dimmelian tie in the co-author model: A study of dynamics and structure of a strategic alliance model. Advances in Complex Systems, 2011, 14( 1): 1-12
    • (2011) Advances in Complex Systems , vol.14 , Issue.1 , pp. 1-12
    • Tambayong, L.1
  • 22
    • 12344259602 scopus 로고    scopus 로고
    • Advances to bayesian network inference for generating causal networks from observational biological data
    • DOI 10.1093/bioinformatics/bth448
    • Yu J, Smith V A, Wang P P, et al. Advances to Bayesian network inference for generating causal networks from observational biological data. Bioinformatics, 2004, 20(18): 3594-3603 (Pubitemid 40136795)
    • (2004) Bioinformatics , vol.20 , Issue.18 , pp. 3594-3603
    • Yu, J.1    Smith, V.A.2    Wang, P.P.3    Hartemink, A.J.4    Jarvis, E.D.5
  • 23
    • 16844376909 scopus 로고    scopus 로고
    • Reverse engineering of regulatory networks in human B cells
    • Basso K, Margolin A A, Stolovitzky G, et al. Reverse engineering of regulatory networks in human B cells. Nature Genetics, 2005, 37( 4): 382-390
    • (2005) Nature Genetics , vol.37 , Issue.4 , pp. 382-390
    • Basso, K.1    Margolin, A.A.2    Stolovitzky, G.3
  • 24
    • 43749106039 scopus 로고    scopus 로고
    • Regulatory network reconstruction using an integral additive model with flexible kernel functions
    • Novikov E, Barillot E. Regulatory network reconstruction using an integral additive model with flexible kernel functions. Bmc Systems Biology, 2008, 2( 2): 5
    • (2008) Bmc Systems Biology , vol.2 , Issue.2 , pp. 5
    • Novikov, E.1    Barillot, E.2
  • 27
    • 34249068297 scopus 로고    scopus 로고
    • Locating multiple optima using particle swarm optimization
    • DOI 10.1016/j.amc.2006.12.066, PII S0096300306017826
    • Brits R, Engelbrecht A P, van den Bergh F. Locating multiple optima using particle swarm optimization. Applied Mathematics and Computation, 2007, 189(2): 1859-1883 (Pubitemid 46802795)
    • (2007) Applied Mathematics and Computation , vol.189 , Issue.2 , pp. 1859-1883
    • Brits, R.1    Engelbrecht, A.P.2    Van Den, B.F.3
  • 28
    • 77956630900 scopus 로고    scopus 로고
    • Gravitation field algorithm and its application in gene cluster
    • Zheng M, Liu G X, Zhou C G, et al. Gravitation field algorithm and its application in gene cluster. Algorithms for Molecular Biology, 2010, 5: 32
    • (2010) Algorithms for Molecular Biology , vol.5 , pp. 32
    • Zheng, M.1    Liu, G.X.2    Zhou, C.G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.