-
1
-
-
42349096534
-
Transposable elements and the evolution of regulatory networks
-
Feschotte C (2008) Transposable elements and the evolution of regulatory networks. Nat Rev Genet 9:397-405.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 397-405
-
-
Feschotte, C.1
-
2
-
-
39049103917
-
Chromatin structure and the regulation of gene expression: The lessons of PEV in Drosophila
-
Girton JR, Johansen KM (2008) Chromatin structure and the regulation of gene expression: The lessons of PEV in Drosophila. Adv Genet 61:1-43.
-
(2008)
Adv Genet
, vol.61
, pp. 1-43
-
-
Girton, J.R.1
Johansen, K.M.2
-
3
-
-
0029066360
-
Position effect variegation in Drosophila is associated with an altered chromatin structure
-
Wallrath LL, Elgin SCR (1995) Position effect variegation in Drosophila is associated with an altered chromatin structure. Genes Dev 9:1263-1277.
-
(1995)
Genes Dev
, vol.9
, pp. 1263-1277
-
-
Wallrath, L.L.1
Elgin, S.C.R.2
-
4
-
-
33750935679
-
Element 1360 and RNAi Components Contribute to HP1-Dependent Silencing of a Pericentric Reporter
-
DOI 10.1016/j.cub.2006.09.035, PII S0960982206022603
-
Haynes KA, Caudy AA, Collins L, Elgin SC (2006) Element 1360 and RNAi components contribute to HP1-dependent silencing of a pericentric reporter. Curr Biol 16:2222-2227. (Pubitemid 44739280)
-
(2006)
Current Biology
, vol.16
, Issue.22
, pp. 2222-2227
-
-
Haynes, K.A.1
Caudy, A.A.2
Collins, L.3
Elgin, S.C.R.4
-
5
-
-
33745410216
-
Site-specific transformation of Drosophila via φC31 integrase-mediated cassette exchange
-
DOI 10.1534/genetics.106.056945
-
Bateman JR, Lee AM, Wu CT (2006) Site-specific transformation of Drosophila via phiC31 integrase-mediated cassette exchange. Genetics 173:769-777. (Pubitemid 43945895)
-
(2006)
Genetics
, vol.173
, Issue.2
, pp. 769-777
-
-
Bateman, J.R.1
Lee, A.M.2
Wu, C.-T.3
-
6
-
-
0026658653
-
Analysis of subtelomeric heterochromatin in the Drosophila minichromosome Dp1187 by single P element insertional mutagenesis
-
Karpen GH, Spradling AC (1992) Analysis of subtelomeric heterochromatin in the Drosophila minichromosome Dp1187 by single P element insertional mutagenesis. Genetics 132:737-753.
-
(1992)
Genetics
, vol.132
, pp. 737-753
-
-
Karpen, G.H.1
Spradling, A.C.2
-
7
-
-
79953060951
-
Comprehensive analysis of the chromatin landscape in Drosophila melanogaster
-
Kharchenko PV, et al. (2011) Comprehensive analysis of the chromatin landscape in Drosophila melanogaster. Nature 471:480-485.
-
(2011)
Nature
, vol.471
, pp. 480-485
-
-
Kharchenko, P.V.1
-
8
-
-
30544432864
-
Three distinct chromatin domains in telomere ends of polytene chromosomes in Drosophila melanogaster Tel mutants
-
DOI 10.1242/jcs.02654
-
Andreyeva EN, Belyaeva ES, Semeshin VF, Pokholkova GV, Zhimulev IF (2005) Three distinct chromatin domains in telomere ends of polytene chromosomes in Drosophila melanogaster Tel mutants. J Cell Sci 118:5465-5477. (Pubitemid 43079288)
-
(2005)
Journal of Cell Science
, vol.118
, Issue.23
, pp. 5465-5477
-
-
Andreyeva, E.N.1
Belyaeva, E.S.2
Sameshin, V.F.3
Pokholkova, G.V.4
Zhimulev, I.F.5
-
9
-
-
34250813192
-
The release 5.1 annotation of Drosophila melanogaster heterochromatin
-
DOI 10.1126/science.1139815
-
Smith CD, Shu S, Mungall CJ, Karpen GH (2007) The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Science 316:1586-1591. (Pubitemid 46982025)
-
(2007)
Science
, vol.316
, Issue.5831
, pp. 1586-1591
-
-
Smith, C.D.1
Shu, S.2
Mungall, C.J.3
Karpen, G.H.4
-
10
-
-
4444283219
-
cis-acting determinants of heterochromatin formation on Drosophila melanogaster chromosome four
-
DOI 10.1128/MCB.24.18.8210-8220.2004
-
Sun F-L, et al. (2004) cis-Acting determinants of heterochromatin formation on Drosophila melanogaster chromosome four. Mol Cell Biol 24:8210-8220. (Pubitemid 39167468)
-
(2004)
Molecular and Cellular Biology
, vol.24
, Issue.18
, pp. 8210-8220
-
-
Sun, F.-L.1
Haynes, K.2
Simpson, C.L.3
Lee, S.D.4
Collins, L.5
Wuller, J.6
Eissenberg, J.C.7
Elgin, S.C.R.8
-
11
-
-
78650331647
-
Identification of functional elements and regulatory circuits by Drosophila modENCODE
-
modENCODE Consortium
-
Roy S, et al.; modENCODE Consortium (2010) Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science 330:1787-1797.
-
(2010)
Science
, vol.330
, pp. 1787-1797
-
-
Roy, S.1
-
12
-
-
79551575925
-
Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin
-
Riddle NC, et al. (2011) Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin. Genome Res 21:147-163.
-
(2011)
Genome Res
, vol.21
, pp. 147-163
-
-
Riddle, N.C.1
-
13
-
-
27944500697
-
H3 lysine 9 methylation is maintained on a transcribed inverted repeat by combined action of SUVH6 and SUVH4 methyltransferases
-
DOI 10.1128/MCB.25.23.10507-10515.2005
-
Ebbs ML, Bartee L, Bender J (2005) H3 lysine 9 methylation is maintained on a transcribed inverted repeat by combined action of SUVH6 and SUVH4 methyltransferases. Mol Cell Biol 25:10507-10515. (Pubitemid 41681971)
-
(2005)
Molecular and Cellular Biology
, vol.25
, Issue.23
, pp. 10507-10515
-
-
Ebbs, M.L.1
Bartee, L.2
Bender, J.3
-
14
-
-
33745561418
-
Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis
-
DOI 10.1038/sj.emboj.7601150, PII 7601150
-
Huettel B, et al. (2006) Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis. EMBO J 25:2828-2836. (Pubitemid 43980389)
-
(2006)
EMBO Journal
, vol.25
, Issue.12
, pp. 2828-2836
-
-
Huettel, B.1
Kanno, T.2
Daxinger, L.3
Aufsatz, W.4
Matzke, A.J.M.5
Matzke, M.6
-
15
-
-
0035838369
-
Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline
-
DOI 10.1016/S0960-9822(01)00299-8
-
Aravin AA, et al. (2001) Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D.melanogaster germline. Curr Biol 11:1017-1027. (Pubitemid 32632716)
-
(2001)
Current Biology
, vol.11
, Issue.13
, pp. 1017-1027
-
-
Aravin, A.A.1
Naumova, N.M.2
Tulin, A.V.3
Vagin, V.V.4
Rozovsky, Y.M.5
Gvozdev, V.A.6
-
17
-
-
33947273235
-
Discrete Small RNA-Generating Loci as Master Regulators of Transposon Activity in Drosophila
-
DOI 10.1016/j.cell.2007.01.043, PII S0092867407002577
-
Brennecke J, et al. (2007) Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell 128:1089-1103. (Pubitemid 46427877)
-
(2007)
Cell
, vol.128
, Issue.6
, pp. 1089-1103
-
-
Brennecke, J.1
Aravin, A.A.2
Stark, A.3
Dus, M.4
Kellis, M.5
Sachidanandam, R.6
Hannon, G.J.7
-
18
-
-
84455206395
-
Adaptation to P element transposon invasion in Drosophila melanogaster
-
Khurana JS, et al. (2011) Adaptation to P element transposon invasion in Drosophila melanogaster. Cell 147:1551-1563.
-
(2011)
Cell
, vol.147
, pp. 1551-1563
-
-
Khurana, J.S.1
-
19
-
-
57149104113
-
An epigenetic role for maternally inherited piRNAs in transposon silencing
-
DOI 10.1126/science.1165171
-
Brennecke J, et al. (2008) An epigenetic role for maternally inherited piRNAs in transposon silencing. Science 322:1387-1392. (Pubitemid 352775252)
-
(2008)
Science
, vol.322
, Issue.5906
, pp. 1387-1392
-
-
Brennecke, J.1
Malone, C.D.2
Aravin, A.A.3
Sachidanandam, R.4
Stark, A.5
Hannon, G.J.6
-
20
-
-
65549118489
-
Collapse of germline piRNAs in the absence of Argonaute3 reveals somatic piRNAs in flies
-
Li C, et al. (2009) Collapse of germline piRNAs in the absence of Argonaute3 reveals somatic piRNAs in flies. Cell 137:509-521.
-
(2009)
Cell
, vol.137
, pp. 509-521
-
-
Li, C.1
-
21
-
-
79955068697
-
The HP1a disordered C terminus and chromo shadow domain cooperate to select target peptide partners
-
Mendez DL, et al. (2011) The HP1a disordered C terminus and chromo shadow domain cooperate to select target peptide partners. ChemBioChem 12:1084-1096.
-
(2011)
ChemBioChem
, vol.12
, pp. 1084-1096
-
-
Mendez, D.L.1
-
22
-
-
84862907807
-
Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line
-
Wang SH, Elgin SC (2011) Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line. Proc Natl Acad Sci USA 108:21164-21169.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 21164-21169
-
-
Wang, S.H.1
Elgin, S.C.2
-
23
-
-
81755163590
-
Separation of stem cell maintenance and transposon silencing functions of Piwi protein
-
Klenov MS, et al. (2011) Separation of stem cell maintenance and transposon silencing functions of Piwi protein. Proc Natl Acad Sci USA 108:18760-18765.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 18760-18765
-
-
Klenov, M.S.1
-
24
-
-
0041941514
-
The small RNA profile during Drosophila melanogaster development
-
DOI 10.1016/S1534-5807(03)00228-4, PII S1534580703002284
-
Aravin AA, et al. (2003) The small RNA profile during Drosophila melanogaster development. Dev Cell 5:337-350. (Pubitemid 37006476)
-
(2003)
Developmental Cell
, vol.5
, Issue.2
, pp. 337-350
-
-
Aravin, A.A.1
Lagos-Quintana, M.2
Yalcin, A.3
Zavolan, M.4
Marks, D.5
Snyder, B.6
Gaasterland, T.7
Meyer, J.8
Tuschl, T.9
-
25
-
-
34147162969
-
Heterochromatin Formation in Drosophila Is Initiated through Active Removal of H3K4 Methylation by the LSD1 Homolog SU(VAR)3-3
-
DOI 10.1016/j.molcel.2007.02.025, PII S1097276507001426
-
Rudolph T, et al. (2007) Heterochromatin formation in Drosophila is initiated through active removal of H3K4 methylation by the LSD1 homolog SU(VAR)3-3. Mol Cell 26:103-115. (Pubitemid 46566423)
-
(2007)
Molecular Cell
, vol.26
, Issue.1
, pp. 103-115
-
-
Rudolph, T.1
Yonezawa, M.2
Lein, S.3
Heidrich, K.4
Kubicek, S.5
Schafer, C.6
Phalke, S.7
Walther, M.8
Schmidt, A.9
Jenuwein, T.10
Reuter, G.11
-
26
-
-
69249225196
-
The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters
-
Klattenhoff C, et al. (2009) The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters. Cell 138:1137-1149.
-
(2009)
Cell
, vol.138
, pp. 1137-1149
-
-
Klattenhoff, C.1
-
27
-
-
33947303168
-
Transposable elements and the epigenetic regulation of the genome
-
DOI 10.1038/nrg2072, PII NRG2072
-
Slotkin RK, Martienssen RA (2007) Transposable elements and the epigenetic regulation of the genome. Nat Rev Genet 8:272-285. (Pubitemid 46439291)
-
(2007)
Nature Reviews Genetics
, vol.8
, Issue.4
, pp. 272-285
-
-
Slotkin, R.K.1
Martienssen, R.2
-
28
-
-
79953043801
-
The developmental transcriptome of Drosophila melanogaster
-
Graveley BR, et al. (2011) The developmental transcriptome of Drosophila melanogaster. Nature 471:473-479.
-
(2011)
Nature
, vol.471
, pp. 473-479
-
-
Graveley, B.R.1
-
29
-
-
80052287311
-
MiMIC: A highly versatile transposon insertion resource for engineering Drosophila melanogaster genes
-
Venken KJ, et al. (2011) MiMIC: A highly versatile transposon insertion resource for engineering Drosophila melanogaster genes. Nat Methods 8:737-743.
-
(2011)
Nat Methods
, vol.8
, pp. 737-743
-
-
Venken, K.J.1
-
30
-
-
0034596989
-
Transcriptional silencing and promoter methylation triggered by double-stranded RNA
-
Mette MF, Aufsatz W, van der Winden J, Matzke MA, Matzke AJ (2000) Transcriptional silencing and promoter methylation triggered by double-stranded RNA. EMBO J 19:5194-5201.
-
(2000)
EMBO J
, vol.19
, pp. 5194-5201
-
-
Mette, M.F.1
Aufsatz, W.2
Van Der Winden, J.3
Matzke, M.A.4
Matzke, A.J.5
-
31
-
-
10644221797
-
RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing
-
DOI 10.1038/ng1452
-
Noma K, et al. (2004) RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing. Nat Genet 36:1174-1180. (Pubitemid 41288966)
-
(2004)
Nature Genetics
, vol.36
, Issue.11
, pp. 1174-1180
-
-
Noma, K.-I.1
Sugiyama, T.2
Cam, H.3
Verdel, A.4
Zofall, M.5
Jia, S.6
Moazed, D.7
Grewal, S.I.S.8
-
32
-
-
41449089409
-
RNA interference guides histone modification during the S phase of chromosomal replication
-
Kloc A, Zaratiegui M, Nora E, Martienssen RA (2008) RNA interference guides histone modification during the S phase of chromosomal replication. Curr Biol 18:490-495.
-
(2008)
Curr Biol
, vol.18
, pp. 490-495
-
-
Kloc, A.1
Zaratiegui, M.2
Nora, E.3
Martienssen, R.A.4
-
33
-
-
38949208022
-
Cell cycle control of centromeric repeat transcription and heterochromatin assembly
-
DOI 10.1038/nature06561, PII NATURE06561
-
Chen ES, et al. (2008) Cell cycle control of centromeric repeat transcription and heterochromatin assembly. Nature 451:734-737. (Pubitemid 351220568)
-
(2008)
Nature
, vol.451
, Issue.7179
, pp. 734-737
-
-
Chen, E.S.1
Zhang, K.2
Nicolas, E.3
Cam, H.P.4
Zofall, M.5
Grewal, S.I.S.6
-
34
-
-
44349125862
-
DNA sequence and the organization of chromosomal domains
-
DOI 10.1016/j.gde.2008.01.001, PII S0959437X08000051
-
Straub T, Becker PB (2008) DNA sequence and the organization of chromosomal domains. Curr Opin Genet Dev 18:175-180. (Pubitemid 351749818)
-
(2008)
Current Opinion in Genetics and Development
, vol.18
, Issue.2
, pp. 175-180
-
-
Straub, T.1
Becker, P.B.2
-
35
-
-
77950387204
-
HP1 recruitment in the absence of argonaute proteins in Drosophila
-
Moshkovich N, Lei EP (2010) HP1 recruitment in the absence of argonaute proteins in Drosophila. PLoS Genet 6:e1000880.
-
(2010)
PLoS Genet
, vol.6
-
-
Moshkovich, N.1
Lei, E.P.2
-
36
-
-
36048937264
-
An epigenetic activation role of Piwi and a Piwi-associated piRNA in Drosophila melanogaster
-
DOI 10.1038/nature06263, PII NATURE06263
-
Yin H, Lin H (2007) An epigenetic activation role of Piwi and a Piwi-associated piRNA in Drosophila melanogaster. Nature 450:304-308. (Pubitemid 350100538)
-
(2007)
Nature
, vol.450
, Issue.7167
, pp. 304-308
-
-
Yin, H.1
Lin, H.2
-
37
-
-
34548784928
-
Repeat-associated siRNAs cause chromatin silencing of retrotransposons in the Drosophila melanogaster germline
-
DOI 10.1093/nar/gkm576
-
Klenov MS, et al. (2007) Repeat-associated siRNAs cause chromatin silencing of retrotransposons in the Drosophila melanogaster germline. Nucleic Acids Res 35:5430-5438. (Pubitemid 47423917)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.16
, pp. 5430-5438
-
-
Klenov, M.S.1
Lavrov, S.A.2
Stolyarenko, A.D.3
Ryazansky, S.S.4
Aravin, A.A.5
Tuschl, T.6
Gvozdev, V.A.7
-
38
-
-
52949113419
-
RNAi, heterochromatin and the cell cycle
-
Kloc A, Martienssen RA (2008) RNAi, heterochromatin and the cell cycle. Trends Genet 24:511-517.
-
(2008)
Trends Genet
, vol.24
, pp. 511-517
-
-
Kloc, A.1
Martienssen, R.A.2
-
39
-
-
38549152196
-
Host genome surveillance for retrotransposons by transposon-derived proteins
-
DOI 10.1038/nature06499, PII NATURE06499
-
Cam HP, Noma K, Ebina H, Levin HL, Grewal SI (2008) Host genome surveillance for retrotransposons by transposon-derived proteins. Nature 451:431-436. (Pubitemid 351158888)
-
(2008)
Nature
, vol.451
, Issue.7177
, pp. 431-436
-
-
Cam, H.P.1
Noma, K.-I.2
Ebina, H.3
Levin, H.L.4
Grewal, S.I.S.5
-
40
-
-
0034284435
-
The BED finger, a novel DNA-binding domain in chromatin-boundaryelement- Binding proteins and transposases
-
Aravind L (2000) The BED finger, a novel DNA-binding domain in chromatin-boundaryelement- binding proteins and transposases. Trends Biochem Sci 25:421-423.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 421-423
-
-
Aravind, L.1
-
41
-
-
67349144654
-
Identification of expressed transposable element insertions in the sequenced genome of Drosophila melanogaster
-
Deloger M, et al. (2009) Identification of expressed transposable element insertions in the sequenced genome of Drosophila melanogaster. Gene 439:55-62.
-
(2009)
Gene
, vol.439
, pp. 55-62
-
-
Deloger, M.1
-
42
-
-
0028691986
-
Raising large quantities of Drosophila for biochemical experiments
-
Shaffer CD, Wuller JM, Elgin SC (1994) Raising large quantities of Drosophila for biochemical experiments. Methods Cell Biol 44:99-108.
-
(1994)
Methods Cell Biol
, vol.44
, pp. 99-108
-
-
Shaffer, C.D.1
Wuller, J.M.2
Elgin, S.C.3
-
43
-
-
78650985680
-
An assessment of histone-modification antibody quality
-
Egelhofer TA, et al. (2011) An assessment of histone-modification antibody quality. Nat Struct Mol Biol 18:91-93.
-
(2011)
Nat Struct Mol Biol
, vol.18
, pp. 91-93
-
-
Egelhofer, T.A.1
|