Ultrastructural and molecular characterization of cyanobacterial symbionts in Dictyocoryne profunda (polycystine radiolaria)

Symbiosis

Volumn 57, Issue 1, 2012, Pages 51-55

  Yuasa, Tomoko ^a   Horiguchi, Takeo ^b   Mayama, Shigeki ^a   Matsuoka, Atsushi ^c   Takahashi, Osamu ^a  

^a TOKYO GAKUGEI UNIVERSITY   (Japan)

^b HOKKAIDO UNIVERSITY   (Japan)

^c NIIGATA UNIVERSITY   (Japan)

Author keywords

Cyanobacteria; Dictyocoryne profunda; Radiolaria; Symbiont; Synechococcus.

Indexed keywords

BACTERIUM; CYANOBACTERIUM; CYTOPLASM; MOLECULAR ANALYSIS; PHYLOGENETICS; RADIOLARIA; SYMBIONT; TAXONOMY; ULTRASTRUCTURE;

EAST CHINA SEA; PACIFIC OCEAN;

BACTERIA (MICROORGANISMS); CYANOBACTERIA; DICTYOCORYNE PROFUNDA; SYNECHOCOCCUS;

EID: 84865501676     PISSN: 03345114     EISSN: 18787665     Source Type: Journal    
DOI: 10.1007/s13199-012-0174-2     Document Type: Article

References (22)

1. Anderson OR (1983) Radiolaria. Springer-Verlag, New York
2. OR Anderson A Matsuoka 1992 Endocytoplasmic microalgae and bacteroids within the central capsule of the radiolarian Dictyocoryne truncatum Symbiosis 12 237 247
3. K Brandt 1881 Ueber das Zusammenleben von Thieren und Algen Verh Physiol Ges Berlin 1881 1882 22 26
4. Carpenter EJ, Foster RA (2002) Marine cyanobacterial symbioses. In: Rai AN, Bergman B, Rasmussen U (eds) Cyanobacteria in symbiosis. Kluwer Academic Pub, Netherlands, pp 11-17
5. Casey RE (1971) Distribution of polycystine Radiolaria in the oceans in relation to physical and chemical conditions. In: Funnell BM, Riedel WR (eds) The Micropalaeontology of oceans. Cambridge University Press, Cambridge, pp 151-159
6. DH Choi JH Noh 2009 Phylogenetic diversity of Synechococcus strains isolated from the East China Sea and the East Sea FEMS Microbiol Ecol 69 439 448 19624741 10.1111/j.1574-6941.2009.00729.x 1:CAS:528:DC%2BD1MXhtVKmsbzK
7. U Edwards T Rogall H Blöcker M Emde EC Böttger 1989 Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA Nucleic Acids Res 17 7843 7853 2798131 10.1093/nar/17.19.7843 1:CAS:528:DyaK3cXjtFKksg%3D%3D
8. J Felsenstein 1981 Evolutionary trees from DNA sequences: a maximum likelihood approach J Mol Evol 17 368 376 7288891 10.1007/BF01734359 1:CAS:528:DyaL3MXls1Cisr8%3D
9. J Felsenstein 1985 Confidence limits on phylogenies: an approach using the bootstrap Evolution 39 783 791 10.2307/2408678
10. MJ Ferris B Palenik 1998 Niche adaptation in ocean cyanobacteria Nature 396 226 228 10.1038/24297 1:CAS:528:DyaK1cXns12msLg%3D
11. RA Foster JL Collier EJ Carpenter 2006 Reverse transcription PCR amplification of cyanobacterial symbiont 16S rRNA sequences from single non-photosynthetic eukaryotic marine planktonic host cells J Phycol 42 243 250 10.1111/j.1529-8817.2006.00185.x 1:CAS:528:DC%2BD28Xis1Sgsro%3D
12. RA Foster EJ Carpenter B Bergman 2006 Unicellular cyanobionts in open ocean dinoflagellates, radiolarians, and tintinnids: ultrastructural characterization and immuno-localization of phycoerythrin and nitrogenase J Phycol 42 453 463 10.1111/j.1529-8817.2006.00206.x 1:CAS:528: DC%2BD28Xkslant7c%3D
13. NJ Fuller D Marie F Partensky D Vaulot AF Post DJ Scanlan 2003 Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea Appl Environ Microbiol 69 2430 2443 12732508 10.1128/AEM.69.5.2430-2443. 2003 1:CAS:528:DC%2BD3sXjslOmu7c%3D
14. RJ Gast DA Caron 1996 Molecular phylogeny of symbiotic dinoflagellates from planktonic foraminifera and radiolaria Mol Biol Evol 13 1192 1197 8896371 10.1093/oxfordjournals.molbev.a025684 1:CAS:528:DyaK28Xms1Siurc%3D
15. D Posada KA Crandall 1998 Modeltest: testing the model of DNA substitution Bioinformatics 14 817 818 9918953 10.1093/bioinformatics/14.9.817 1:CAS:528:DyaK1MXktlCltw%3D%3D
16. Rambaut A (1996) Se-Al. Sequence Alignment Editor, version1.0a1. Distributed by the author, Department of Zoology, University of Oxford
17. ES Reynolds 1963 The use of lead citrate at high pH as an electron-opaque stain in electron microscopy J Cell Biol 17 208 212 13986422 10.1083/jcb.17.1.208 1:CAS:528:DyaF3sXktVClu70%3D
18. G Rocap DL Distel JB Waterbury SW Chisholm 2002 Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences Appl Environ Microbiol 68 1180 1191 11872466 10.1128/AEM.68.3.1180-1191.2002 1:CAS:528:DC%2BD38XitFSjsr4%3D
19. N Saitou M Nei 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol 4 406 425 3447015 1:STN:280:DyaL1c7ovFSjsA%3D%3D
20. Swofford DL (2002) Phylogenetic Analysis Using Parsimony (PAUP*), ver 4.0b10. Sinauer Associates, Sunderland
21. V Tai B Palenik 2009 Temporal variation of Synechococcus clades at a costal Pacific Ocean monitoring site ISME J 3 903 915 19360028 10.1038/ismej.2009.35 1:CAS:528:DC%2BD1MXovFOgu78%3D
22. JD Thompson DG Higgins TJ Gibson 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673 4680 7984417 10.1093/nar/22.22.4673 1:CAS:528: DyaK2MXitlSgu74%3D