Transfer of transgenes for resistance to rice tungro disease into high-yielding rice cultivars through gene-based marker-assisted selection

Journal of Agricultural Science

Volumn 150, Issue 5, 2012, Pages 610-618

  Roy, S ^a,c   Banerjee, A ^a,d   Tarafdar, J ^a   Senapati, B K ^a   Dasgupta, I ^b  

^a BIDHAN CHANDRA KRISHI VISWAVIDYALAYA   (India)

^b UNIVERSITY OF DELHI   (India)

^c NATIONAL BUREAU OF PLANT GENETIC RESOURCES   (India)

^d ICAR RESEARCH COMPLEX FOR NEH REGION   (India)

Author keywords

[No Author keywords available]

Indexed keywords

ALTERNATIVE AGRICULTURE; CROP YIELD; CULTIVAR; DISEASE RESISTANCE; GENE EXPRESSION; GENE TRANSFER; GENETIC MARKER; RICE; SELECTIVE BREEDING; SYMPTOM; TRANSGENIC PLANT; VIRAL DISEASE;

SOUTH ASIA; SOUTHEAST ASIA;

PUSA; RICE TUNGRO BACILLIFORM VIRUS; RICE TUNGRO SPHERICAL VIRUS; TUNGROVIRUS;

EID: 84865476009     PISSN: 00218596     EISSN: 14695146     Source Type: Journal    
DOI: 10.1017/S0021859611000827     Document Type: Article

References (36)

1. ABHARY, M. K., ANFOKA, G. H., NAKHLA, M.K. & MAXWELL, D. P. (2006). Post-transcriptional gene silencing in controlling viruses of the Tomato yellow leaf curl virus complex. Archives of Virology 151, 2349-2363. (Pubitemid 44819333)
2. ARAGAO, F.J.L. & FARIA, J. C. (2009). First transgenic geminivirus-resistant plant in the field. Nature Biotechnology 27, 1086-1088.
3. AZZAM, O. & CHANCELLOR, T. C. B. (2002). The biology, epidemiology and management of rice tungro disease in Asia. Plant Disease 86, 88-100. (Pubitemid 34115404)
4. BAISAKH, N., REHANA, S., RAI, M., OLIVA, N., TAN, J., MACKILL, D. J., KHUSH, G. S., DATTA, K. & DATTA, S.K. (2006). Marker-free transgenic (MFT) near-isogenic introgression lines (NIILs) of 'golden' indica rice (cv. IR64) with accumulation of provitamin A in the endosperm tissue. Plant Biotechnology Journal 4, 467-475. (Pubitemid 43886818)
5. BONFIM, K., FARIA, J. C., NOGUEIRA, E. O., MENDES, É. A. & ARAGÃO, F. J. (2007). RNAi-mediated resistance to Bean golden mosaic virus in genetically engineered common bean (Phaseolus vulgaris). Molecular Plant Microbe Interaction 20, 717-726. (Pubitemid 47011026)
6. BRADFORD, M.M. (1976). A rapid and sensitive method for the quantification microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry 72, 248-254.
7. CHICAS, A. & MACINO, G. (2001). Characteristics of posttranscriptional gene silencing. EMBO Reports 2, 992-996.
8. DAHAL, G., HIBINO, H., CABUNAGAN, R. C., TIONGCO, E. R., FLORES, Z.M. & AGUIERO, V.M. (1990). Changes in cultivar reactions to tungro due to changes in 'virulence' of leafhopper vector. Phytopathology 80, 659-665.
9. DAI, S. & BEACHY, R. N. (2009). Genetic engineering of rice to resist rice tungro disease. In vitro Cellular and Developmental Biology - Plant 45, 517-524.
10. DAI, S., WEI, X., ALFONSO, A. A., PEI, L., DUQUE, U. G., ZHANG, Z., BABB, G.M. & BEACHY, R. N. (2008). Transgenic rice plants that over express transcription factors RF2a and RF2b are tolerant to rice tungro virus replication and disease. Proceedings of the National Academy of Sciences of the USA 105, 21012-21016.
11. DASGUPTA, I., HULL, R., EASTOP, S., POGGI-POLLINI, C., BLAKEBROUGH, M. L., BOULTON, M. I. & DAVIES, J.W. (1991). Rice tungro bacilliform virus DNA independently infects rice after Agrobacterium mediated transfer. Journal of General Virology 72, 1215-1221.
12. DATTA, K., BAISAKH, N., THET, K. M., TU, J. & DATTA, S. K. (2002). Pyramiding transgenes for multiple resistance in rice against bacterial blight, yellow stem borer and sheath blight. Theoretical and Applied Genetics 106, 1-8. (Pubitemid 36599682)
13. DELLAPORTA, S. L., WOOD, J. & HICKS, J. B. (1983). A plant DNA mini-preparation, version II. Plant Molecular Biology Reporter 1, 19-21.
14. GANESAN, U., SURI, S. S., RAJASUBRAMANIAM, S., RAJAM, M.V. & DASGUPTA, I. (2009). Transgenic expression of coat protein gene of Rice tungro bacilliform virus in rice reduces the accumulation of viral DNA in inoculated plants. Virus Genes 39, 113-119.
15. HERR, A. J. (2005). Pathways through the small RNA world of plants. FEBS Letters 579, 5879-5888. (Pubitemid 41484133)
16. HIBINO, H. & CABAUATAN, P.Q. (1987). Infectivity neutralization of rice tungro-associated viruses acquired by vectors leafhoppers. Phytopathology 77, 473-476.
17. HIBINO, H., ROECHAN, M. & SUDARISMAN, S. (1978). Association of two types of virus particles with Penyakit Habang (Tungro Disease) of rice in Indonesia. Phytopathology 68, 1412-1416.
18. HULL, R. (1996). Molecular biology of rice tungro viruses. Annual Review of Phytopathology 34, 275-297. (Pubitemid 26368804)
19. HULL, R., GEERING, A., HARPER, G., LOCKHART, B.E. & SCHOLEZ, J. E. (2005). Family caulimoviridae. In Virus Taxonomy: VIIIth Report of the International Committee on Taxonomy of Virus (Eds C. M. Fauquet, M. A. Mayo, J. Maniloff, U. Desselberger & L. Ball), pp. 385-396. London: Elsevier Academic Press.
20. IRRI (1996). Standard Evaluation System for Rice. Los Banos, The Philippines: IRRI.
21. KHUSH, G. S., ANGELES, E., VIRK, P.S. & BRAR, D. S. (2004). Breeding rice for resistance to tungro virus at IRRI. SABRAO Journal of Breeding and Genetics 36, 101-106. (Pubitemid 40077286)
22. LENNEFORS, B.-L., SAVENKOV, E. I., BENSEFELT, J., WREMERTHWEICH, E., VAN ROGGEN, P., TUVESSON, S., VALKONEN, J.P.T. & GIELEN, J. (2006). dsRNA-mediated resistance to Beet necrotic yellow vein virus infections in sugar beet (Beta vulgaris L. ssp. vulgaris). Molecular Breeding 18, 313-325. (Pubitemid 44657710)
23. MA, J., SONG, Y., WU, B., JIANG, M., LI, K., ZHU, C. & WEN, F. (2011). Production of transgenic rice new germplasm with strong resistance against two isolations of Rice stripe virus by RNA interference. Transgenic Research DOI 10.007/s11248-011-9502-1.
24. MATTHEWS, P., WANG, M. B., WATERHOUSE, P. M., THORNTON, S., FIEG, S. J., GUBLER, F. & JACOBSEN, J. V. (2001). Marker gene elimination from transgenic barley, using cotransformation with adjacent 'twin T-DNAs' on a standard Agrobacterium transformation vector. Molecular Breeding 7, 195-202. (Pubitemid 32675678)
25. MAZO, A., HODGSON, J.W., PETRUK, S., SEDKOV, Y. & BROCK, H.W. (2007). Transcriptional interference: an unexpected layer of complexity in gene regulation. Journal of Cell Science 120, 2755-2761. (Pubitemid 47394250)
26. MEW, T.W., LEUNG, H., SAVARY, S., CRUZ, C.M.V. & LEACH, J. E. (2004). Looking ahead in rice disease research and management. Critical Reviews in Plant Sciences 23, 103-127. (Pubitemid 38504473)
27. MURALIDHARAN, K., KRISHNAVENI, D., RAJARAJESWARI, N.V.L. & PRASAD, A. S. R. (2003). Tungro epidemics and yield losses in paddy fields in India. Current Science 85, 1143-1147. (Pubitemid 39160369)
28. NATH, N., MATHUR, S. & DASGUPTA, I. (2002). Molecular analysis of two complete rice tungro bacilliform virus genomic sequences from India. Archives of Virology 147, 1173-1187. (Pubitemid 34592886)
29. RAMESH, S. V., MISHRA, A.K. & PRAVEEN, S. (2007). Hairpin RNA mediated strategies for silencing of Tomato leaf curl virus AC1 and AC4 genes for effective resistance in plants. Oligonucleotides 17, 251-257. (Pubitemid 47124421)
30. SHAO, Q. M., RUSH, M. C., WU, M. C., GROTH, D. E., KANG, M.S. & LINSCOMBE, S. D. (2009). Transgene transfer to United States commercial rice cultivars via conventional breeding techniques. Journal of Crop Improvement 16, 49-65. (Pubitemid 44200107)
31. SHEN, P., KANIEWSKA, M., SMITH, C. & BEACHY, R. N. (1993). Nucleotide sequence and genomic organization of rice tungro spherical virus. Virology 193, 621-630.
32. SIVAMANI, E., HUET, H., SHEN, P., ONG, C. A., DEKOCHKO, A., FAUQUET, C.M. & BEACHY, R. N. (1999). Rice plants (Oryza sativa L) containing Rice tungro spherical virus (RTSV) coat protein transgenes are resistant to virus infection. Molecular Breeding 5, 177-185. (Pubitemid 29126027)
33. SPSS Inc. (2007). SPSS Base 16. for Windows User's Guide. Chicago, IL: SPSS Inc.
34. TYAGI, H., RAJASUBRAMANIAM, S., RAJAM, M.V. & DASGUPTA, I. (2008). RNA-interference in rice against Rice tungro bacilliform virus results in its decreased accumulation in inoculated rice plants. Transgenic Research 17, 897-904.
35. VERMA, V. & DASGUPTA, I. (2007). Sequence analysis of the complete genomes of two Rice tungro spherical virus isolates from India. Archives of Virology 152, 645-648. (Pubitemid 46363606)
36. WARD, J. H. Jr. (1963). Hierarchical grouping to optimize an objective function. Journal of American Statistical Association 58, 236-244.