The NAC transcription factor gene ANAC072 is differentially expressed in Arabidopsis thaliana in response to microbe-associated molecular pattern (MAMP) molecules

Physiological and Molecular Plant Pathology

Volumn 80, Issue , 2012, Pages 19-27

  Huang, Ju Chi ^a   Piater, Lizelle A ^a   Dubery, Ian A ^a  

^a UNIVERSITY OF JOHANNESBURG   (South Africa)

Author keywords

Arabidopsis; Biotic stress; Flagellin; Innate immunity; Lipopolysaccharides; NAC; Peptidoglycan; Transcription factor

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; BURKHOLDERIA CEPACIA;

EID: 84865334204     PISSN: 08855765     EISSN: 10961178     Source Type: Journal    
DOI: 10.1016/j.pmpp.2012.07.002     Document Type: Article

References (65)

1. Boller T., Felix G. A renaissance of elicitors: perception of microbe-associated molecular patterns and danger signals by pattern-recognition receptors. Annu Rev Plant Biol 2009, 60:379-406.
2. Segonzac C., Zipfel C. Activation of plant pattern-recognition receptors by bacteria. Curr Opin Microbiol 2011, 14:54-61.
3. Jones J.D.G., Dangl J.L. The plant immune system. Nature 2006, 444:323-329.
4. Nürnberger T., Kemmerling B. Receptor protein kinases - pattern recognition receptors in plant immunity. Trends Plant Sci 2006, 11:519-522.
5. Gómez-Gómez L., Felix G., Boller T. A single locus determines sensitivity to bacterial flagellin in Arabidopsis thaliana. Plant J 1999, 18:277-284.
6. Gómez-Gómez L., Boller T. FLS2: an LRR receptor-like kinase involved in the perception of the bacterial elicitor flagellin in Arabidopsis. Mol Cell 2000, 5:1003-1011.
7. Gust A.A., Biswas R., Lenz H.D., Rauhut T., Ranf S., Kemmerling B., et al. Bacteria-derived peptidoglycans constitute pathogen-associated molecular patterns triggering innate immunity in Arabidopsis. J Biol Chem 2007, 282:32338-32348.
8. Gerber I.B., Laukens K., De Vijlder T., Witters E., Dubery I.A. Proteomic profiling of cellular targets of lipopolysaccharide-induced signalling in Nicotiana tabacum BY-2 cells. Biochim Biophys Act - Prot & Proteom 2008, 1784:1750-1762.
9. Riechmann J.L., Heard J., Martin G., Reuber L., Jiang C.-Z., Keddie J., et al. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 2000, 290:2105-2110.
10. Collinge M., Boller T. Differential induction of two potato genes, Stprx2 and StNAC, in response to infection by Phytophthora infestans and to wounding. Plant Mol Biol 2001, 46:521-529.
11. Hegedus D., Yu M., Baldwin D., Gruber M., Sharpe A., Parkin I., et al. Molecular characterization of Brassica napus NAC domain transcriptional activators induced in response to biotic and abiotic stress. Plant Mol Biol 2003, 53:383-397.
12. Seo P.J., Kim M.J., Park J.Y., Kim S.Y., Jeon J., Lee Y.H., Kim J., Park C.M. Cold activation of a plasma membrane tethered NAC transcription factor induces a pathogen resistance response in Arabidopsis. Plant J 2010, 61:661-671.
13. Puranik S., Sahu P.P., Srivastava P.S., Prasad M. NAC proteins: regulation and role in stress tolerance. Trends Plant Sci 2012, 10.1016/j.tplants.2012.02.004.
14. Olsen A.N., Ernst H.A., Leggio L.L., Skriver K. NAC transcription factors: structurally distinct, functionally diverse. Trends Plant Sci 2005, 10:79-87.
15. Jensen M.K., Kjaersgaard T., Nielsen M.M., Galberg P., Petersen K., O'Shea C., et al. The Arabidopsis thaliana NAC transcription factor family: structure-function relationships and determinants of ANAC019 stress signalling. Biochem J 2010, 426:183-196.
16. Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., et al. Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DNA Res 2003, 10:239-247.
17. Aida M., Ishida T., Fukaki H., Fujisawa H., Tasaka M. Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant. Plant Cell 1997, 9:841-857.
18. Tran L.S.P., Nakashima K., Sakuma Y., Simpson S.D., Fujita Y., Maruyama K., et al. Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter. Plant Cell 2004, 16:2481-2498.
19. Suzuki K., Yano A., Nishiuchi T., Nakano T., Kodama H., Yamaguchi K., et al. Comprehensive analysis of early response genes to two different microbial elicitors in tobacco cells. Plant Sci 2007, 173:291-301.
20. Xia N., Zhang G., Sun Y.F., Zhu L., Xu L.S., Chen X.M., et al. TaNAC8, a novel NAC transcription factor gene in wheat, responds to stripe rust pathogen infection and abiotic stresses. Physiol Mol Plant Pathol 2010, 74:394-402.
21. Wang Xe, Basnayake B.M.V.S., Zhang H., Li G., Li W., Virk N., et al. The Arabidopsis ATAF1, a NAC transcription factor, is a negative regulator of defense responses against necrotrophic fungal and bacterial pathogens. Mol Plant-Microbe Inter 2009, 22:1227-1238.
22. Al-Daoud F., Cameron R.K. ANAC055 and ANAC092 contribute non-redundantly in an EIN2-dependent manner to age-related resistance in Arabidopsis. Physiol Mol Plant Pathol 2011, 76:212-222.
23. Saga H., Ogawa T., Kai K., Suzuki H., Ogata Y., Sakurai N., et al. Identification and characterization of ANAC042, a transcription factor family gene involved in the regulation of camalexin biosynthesis in Arabidopsis. Mol Plant-Microbe Inter 2012, 25:648-696.
24. Sanabria N.M., Dubery I.A. Differential display profiling of the Nicotiana response to LPS reveals elements of plant basal resistance. Biochem Biophys Res Commun 2006, 344:1001-1007.
25. Madala N.E., Leone M.R., Molinaro A., Dubery I.A. Deciphering the structural and biological properties of the lipid A moiety of lipopolysaccharides from Burkholderia cepacia strain ASP B 2D, in Arabidopsis thaliana. Glycobiology 2011, 21:184-194.
26. Zhang B., Ramonell K., Somerville S., Stacey G. Characterization of early, chitin-induced gene expression in Arabidopsis. Mol Plant-Microbe Inter 2002, 15:963-970.
27. Gerber I.B., Zeidler D., Durner J., Dubery I.A. Early perception responses of Nicotiana tabacum cells in response to lipopolysaccharides from Burkholderia cepacia. Planta 2004, 218:647-657.
28. Chomczynski P. A reagent for the single-step simultaneous isolation of RNA, DNA and proteins from cell and tissue samples. Biotechniques 1993, 15:532-537.
29. Sambrook J., Russell D. Molecular cloning: a laboratory manual 2001, Cold Spring Harbor Laboratory Press, New York. 3rd ed.
30. Coventry H.S., Dubery I.A. Lipopolysaccharides from Burkholderia cepacia contribute to an enhanced defensive capacity and the induction of pathogenesis-related proteins in Nicotiana tabacum. Physiol Mol Plant Pathol 2001, 58:149-158.
31. Zeidler D., Zahringer U., Gerber I., Dubery I., Hartung T., Bors W., et al. Innate immunity in Arabidopsis thaliana: lipopolysaccharides activate nitric oxide synthase (NOS) and induce defense genes. Proc Natl Acad Sci USA 2004, 101:15811-15816.
32. Chang W.C., Lee T.Y., Huang H.D., Huang H.Y., Pan R.L. PlantPAN: plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups. BMC Genomics 2008, 9:561.
33. Zimmermann P., Hirsch-Hoffmann M., Hennig L., Gruissem W. GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. Plant Physiol 2004, 136:2621-2632.
34. Kim H.S., Park B.O., Yoo J.H., Jung M.S., Lee S.M., Han H.J., et al. Identification of a calmodulin-binding NAC protein as a transcriptional repressor in Arabidopsis. J Biol Chem 2007, 282:36292-36302.
35. Desaki Y., Miya A., Venkatesh B., Tsuyumu S., Yamane H., Kaku H., et al. Bacterial lipopolysaccharides induce defense responses associated with programmed cell death in rice cells. Plant Cell Physiol 2006, 47:1530-1540.
36. Sun H., Huang X., Xu X., Lan H., Huang J., Zhang H.-S. ENAC1, a NAC transcription factor, is an early and transient response regulator induced by abiotic stress in rice (Oryza sativa L.). Mol Biotechnol 2012, 10.1007/s12033-011-9477-4.
37. Gerber I.B., Dubery I.A. Protein phosphorylation in Nicotiana tabacum cells in response to perception of lipopolysaccharides from Burkholderia cepacia. Phytochemistry 2004, 65:2957-2966.
38. Newman M.A., Dow J.M., Molinaro A., Parrilli M. Invited review: priming, induction and modulation of plant defence responses by bacterial lipopolysaccharides. J Endotox Res 2007, 13:69-84.
39. Nürnberger T., Brunner F. Innate immunity in plants and animals: emerging parallels between the recognition of general elicitors and pathogen-associated molecular patterns. Curr Opin Plant Biol 2002, 5:318-324.
40. Erbs G., Newman M.A. The role of lipopolysaccharides in induction of plant defence responses. Mol Plant Pathol 2003, 4:421-425.
41. Nürnberger T., Brunner F., Kemmerling B., Piater L.A. Innate immunity in plants and animals: striking similarities and obvious differences. Immunol Rev 2004, 198:249-266.
42. Rushton P.J., Bokowiec M.T., Han S., Zhang H., Brannock J.F., Chen X., et al. Tobacco transcription factors: novel insights into transcriptional regulation in the Solanaceae. Plant Physiol 2008, 147:280-295.
43. Hu R., Qi G., Kong Y., Kong D., Gao Q., Zhou G. Comprehensive analysis of NAC domain transcription factor gene family in Populus trichocarpa. BMC Plant Biol 2010, 10:145.
44. Fujita M., Fujita Y., Maruyama K., Seki M., Hiratsu K., Ohme-Takagi M., et al. A dehydration-induced NAC protein, RD26, is involved in a novel ABA-dependent stress-signaling pathway. Plant J 2004, 39:863-876.
45. Jin H., Cominelli E., Bailey P., Parr A., Mehrtens F., Jones J., et al. Transcriptional repression by AtMYB4 controls production of UV-protecting sunscreens in Arabidopsis. EMBO J 2000, 19:6150-6161.
46. Xia N., Zhang G., Liu X.Y., Deng L., Cai G.L., Zhang Y., et al. Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses. Mol Biol Rep 2010, 37:3703-3712.
47. Delessert C., Kazan K., Wilson I.W., Straeten D.V.D., Manners J., Dennis E.S., et al. The transcription factor ATAF2 represses the expression of pathogenesis-related genes in Arabidopsis. Plant J 2005, 43:745-757.
48. Jensen M., Rung J., Gregersen P., Gjetting T., Fuglsang A., Hansen M., et al. The HvNAC6 transcription factor: a positive regulator of penetration resistance in barley and Arabidopsis. Plant Mol Biol 2007, 65:137-150.
49. Bu Q., Jiang H., Li C.-B., Zhai Q., Zhang J., Wu X., et al. Role of the Arabidopsis thaliana NAC transcription factors ANAC019 and ANAC055 in regulating jasmonic acid-signaled defense responses. Cell Res 2008, 18:756-767.
50. Miao Y., Laun T., Zimmermann P., Zentgraf U. Targets of the WRKY53 transcription factor and its role during leaf senescence in Arabidopsis. Plant Mol Biol 2004, 55:853-867.
51. Yun K.-Y., Park M., Mohanty B., Herath V., Xu F., Mauleon R., et al. Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress. BMC Plant Biol 2010, 10:16.
52. Livaja M., Zeidler D., von Rad U., Durner J. Transcriptional responses of Arabidopsis thaliana to the bacteria-derived PAMPs harpin and lipopolysaccharide. Immunobiology 2008, 213:161-171.
53. Wu Y., Deng Z., Lai J., Zhang Y., Yang C., Yin B., et al. Dual function of Arabidopsis ATAF1 in abiotic and biotic stress responses. Cell Res 2009, 19:1279-1290.
54. Koornneef A., Pieterse C.M.J. Cross talk in defense signaling. Plant Physiol 2008, 146:839-844.
55. Bari R., Jones J. Role of plant hormones in plant defence responses. Plant Mol Biol 2009, 69:473-488.
56. de Torres-Zabala M., Truman W., Bennett M.H., Lafforgue G., Mansfield J.W., Rodriguez Egea P., et al. Pseudomonas syringae pv. tomato hijacks the Arabidopsis abscisic acid signalling pathway to cause disease. EMBO J 2007, 26:1434-1443.
57. Mauch-Mani B., Flors V. The ATAF1 transcription factor: at the convergence point of ABA-dependent plant defense against biotic and abiotic stresses. Cell Res 2009, 19:1322-1323.
58. Jensen M.K., Hagedorn P.H., De Torres-Zabala M., Grant M.R., Rung J.H., Collinge D.B., et al. Transcriptional regulation by an NAC (NAM-ATAF1,2-CUC2) transcription factor attenuates ABA signalling for efficient basal defence towards Blumeria graminis f. sp. hordei in Arabidopsis. Plant J 2008, 56:867-880.
59. Peng H., Cheng H.-Y., Chen C., Yu X.-W., Yang J.-N., Gao W.-R., et al. A NAC transcription factor gene of Chickpea (Cicer arietinum), CarNAC3, is involved in drought stress response and various developmental processes. J Plant Physiol 2009, 166:1934-1945.
60. Hao Y.-J., Wei W., Song Q.-X., Chen H.-W., Zhang Y.-Q., Wang F., et al. Soybean NAC transcription factors promote abiotic stress tolerance and lateral root formation in transgenic plants. Plant J 2011, 68:302-313.
61. Suzuki N., Koussevitzky S., Mittler R.O.N., Miller G.A.D. ROS and redox signalling in the response of plants to abiotic stress. Plant Cell Environ 2011, 35:259-270.
62. Taj G., Sharma S., Gaur V.S., Kumar A. Prediction of downstream interaction of transcription factors with MAPK3 in Arabidopsis thaliana using protein sequence information. Int J Bioinformat Res 2011, 3:167-177.
63. Piater L.A., Nürnberger T., Dubery I.A. Identification of a lipopolysaccharide responsive erk-like MAP kinase in tobacco leaf tissue. Mol Plant Pathol 2004, 5:331-341.
64. Zhang J., Zhou J.-M. Plant immunity triggered by microbial molecular signatures. Mol Plant 2010, 3:783-793.
65. Boutrot F., Segonzac C., Chang K.N., Qiao H., Ecker J.R., Zipfel C., et al. Direct transcriptional control of the Arabidopsis immune receptor FLS2 by the ethylene-dependent transcription factors EIN3 and EIL1. Proc Natl Acad Sci USA 2010, 107:14502-14507.