Bayesian integration of isotope ratio for geographic sourcing of castor beans

Journal of Biomedicine and Biotechnology

Volumn 2012, Issue , 2012, Pages

  Webb Robertson, Bobbie Jo ^a   Kreuzer, Helen ^a   Hart, Garret ^a   Ehleringer, James ^b   West, Jason ^c   Gill, Gary ^a   Duckworth, Douglas ^a  

^a PACIFIC NORTHWEST NATIONAL LABORATORY   (United States)

^b UNIVERSITY OF UTAH   (United States)

^c TEXAS A AND M UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CARBON; HYDROGEN; NITROGEN; OXYGEN; STRONTIUM; ISOTOPE;

ACCURACY; ARTICLE; BAYES THEOREM; GENETIC VARIABILITY; GEOGRAPHIC ORIGIN; HUMAN; PLANT GENETICS; RICINUS COMMUNIS; UNITED STATES; AREA UNDER THE CURVE; BIOLOGICAL MODEL; BRAZIL; CHINA; GEOGRAPHY; INDIA; ISOTOPE LABELING; METABOLISM; METHODOLOGY; RECEIVER OPERATING CHARACTERISTIC; SAMPLE SIZE;

AREA UNDER CURVE; BAYES THEOREM; BRAZIL; CASTOR BEAN; CHINA; GEOGRAPHY; INDIA; ISOTOPE LABELING; ISOTOPES; MODELS, BIOLOGICAL; ROC CURVE; SAMPLE SIZE; STRONTIUM ISOTOPES; UNITED STATES;

EID: 84864938678     PISSN: 11107243     EISSN: 11107251     Source Type: Journal    
DOI: 10.1155/2012/450967     Document Type: Article

References (33)

1. Weiss E. A., Castor. Oilseed Crops 1983 London, UK Longman
2. Bradberry S. M., Dickers K. J., Rice P., Griffiths G. D., Vale J. A., Ricin poisoning Toxicological Reviews 2003 22 1 65 70 (Pubitemid 37270713)
3. Challoner K. R., McCarron M. M., Castor bean intoxication Annals of Emergency Medicine 1990 19 10 1177 1183 (Pubitemid 20365211)
4. Bale J. M., Ricin Found in London: An al-Qa'ida Connection? 2002 Monterey, Calif, USA James Martin Center for Nonproliferation Studies
5. Colburn H. A., Wunschel D. S., Kreuzer H. W., Moran J. J., Antolick K. C., Melville A. M., Analysis of carbohydrate and fatty acid marker abundance in ricin toxin preparations for forensic information Analytical Chemistry 2010 82 14 6040 6047
6. Kreuzer H. W., Wahl J. H., Metoyer C. N., Colburn H. A., Wahl K. L., Detection of acetone processing of castor bean mash for forensic investigation of ricin preparation methods Journal of Forensic Sciences 2010 55 4 908 914
7. Cerling T. E., Wittemyer G., Rasmussen H. B., Vollrath F., Cerling C. E., Robinson T. J., Douglas-Hamilton I., Stable isotopes in elephant hair document migration patterns and diet changes Proceedings of the National Academy of Sciences of the United States of America 2006 103 2 371 373 (Pubitemid 43122407)
8. Ehleringer J. R., Casale J. F., Lott M. J., Ford V. L., Tracing the geographical origin of cocaine: Cocaine carries a chemical fingerprint from the region where the coca was grown Nature 2000 408 6810 311 312
9. Ehleringer J. R., Cooper D. A., Lott M. J., Cook C. S., Geo-location of heroin and cocaine by stable isotope ratios Forensic Science International 1999 106 1 27 35 (Pubitemid 30009386)
10. Swoboda S., Brunner M., Boulyga S. F., Galler P., Horacek M., Prohaska T., Identification of Marchfeld asparagus using Sr isotope ratio measurements by MC-ICP-MS Analytical and Bioanalytical Chemistry 2008 390 2 487 494
11. West J. B., Ehleringer J. R., Cerling T. E., Geography and vintage predicted by a novel GIS model of wine 18 O Journal of Agricultural and Food Chemistry 2007 55 17 7075 7083 (Pubitemid 47338949)
12. West J. B., Kreuzer H. W., Ehleringer J. R., West J. B., Approaches to plant hydrogen and oxygen isoscapes generation Isoscapes: Understanding Movement, Pattern, and Process on Earth through Isotope Mapping 2010 Monterey, Calif, USA Springer 161 178
13. Beard B. L., Johnson C. M., Strontium isotope composition of skeletal material can determine the birth place and geographic mobility of humans and animals Journal of Forensic Sciences 2000 45 5 1049 1061
14. Kreuzer H. W., West J. B., Ehleringer J. R., Forensic applications of light-element stable isotope ratios of Ricinus communis seeds and ricin preparations. Journal of Forensic Sciences. In press
15. Ehleringer J. R., Stable isotope ratio analyses of castor bean: a ricin signature program Federal Bureau of Investigation 2006
16. Coplen T. B., New guidelines for reporting stable hydrogen, carbon and oxygen isotope-ratio data Geochimica et Cosmochimica Acta 1996 60 17 3359 3360
17. Bernardo J. M., Smith A. F. M., Bayesian Theory 2000 New York John Wiley Sons
18. Webb-Robertson B. J., McCue L. A., Beagley N., McDermott J. E., Wunschel D. S., Varnum S. M., Hu J. Z., Isern N. G., Buchko G. W., Mcateer K., Pounds J. G., Skerrett S. J., Liggitt D., Frevert C. W., A Bayesian integration model of high-throughput proteomics and metabolomics data for improved early detection of microbial infections Pacific Symposium on Biocomputing 2009 451 463
19. Jarque C. M., Bera A. K., A test for normality of observations and regression residuals International Statistical Review 1987 55 2 163 172
20. Beebe K. R., Pell R. J., Seasholtz M. B., Chemometrics: A Practical Guide 1998 Hoboken, NJ, USA John Wiley Sons
21. McCullagh P., Nelder J. A., Generalized Linear Models 1990 New York, NY, USA Chapman Hall
22. Jiang W., Simon R., A comparison of bootstrap methods and an adjusted bootstrap approach for estimating the prediction error in microarray classification Statistics in Medicine 2007 26 29 5320 5334 (Pubitemid 350285115)
23. Farquhar G. D., Ehleringer J. R., Hubick K. T., Carbon isotope discrimination and photosynthesis Annual Review of Plant Physiology and Molecular Biology 1989 40 503 537
24. Farquhar G. D., Richards R. A., Isotopic composition of plant carbon correlates with water-use efficiency of wheat genotypes Australian Journal of Plant Physiology 1984 11 6 539 552 (Pubitemid 16276820)
25. Farquhar G. D., O'Leary M. H., Berry J. A., On the relationship between carbon isotope discrimination and the intercellular carbon dioxide concentration in leaves Australian Journal of Plant Physiology 1982 9 2 121 137 (Pubitemid 13280643)
26. Sternberg L., DeNiro M., Savidge R., Oxygen isotope exchange between metabolites and water during biochemical reactions leading to cellulose synthesis Plant Physiology 1986 82 423 427
27. Gray J., Thompson P., Climatic information from 18 O/ 16 O ratios of cellulose in tree rings Nature 1976 262 5568 481 482
28. Epstein S., Thompson P., Yapp C. J., Oxygen and hydrogen isotopic ratios in plant cellulose Science 1977 198 4323 1209 1215 (Pubitemid 8308539)
29. Nadelhoffer L. H. Pardo and K. J., West J. B., Using nitrogen isotope ratios to assess terrestrial ecosystems at regional and global scales Isoscapes: Understanding Movement, Pattern, and Process on Earth through Isotope Mapping 2010 Dordrecht, The Netherlands Springer 221 250
30. Ott R. L., Longnecker M., An Introduction to Statistical Methods and Data Analysis 2010 6th Belmont Brooks/Cole
31. Beagley N., Stratton K. G., Webb-Robertson B. J., VIBE 2.0: visual integration for bayesian evaluation Bioinformatics (Oxford, England) 2010 26 2 280 282
32. Craig H., Isotopic variations in meteoric waters Science 1961 133 3465 1702 1703
33. Kendall C., Coplen T. B., Distribution of oxygen-18 and deuteriun in river waters across the United States Hydrological Processes 2001 15 7 1363 1393 (Pubitemid 32555062)