Pattern recognition of cancer cells using aptamer-conjugated magnetic nanoparticles

ACS Nano

Volumn 6, Issue 5, 2012, Pages 3974-3981

  Bamrungsap, Suwussa ^a   Chen, Tao ^a   Shukoor, Mohammed Ibrahim ^a   Chen, Zhuo ^a   Sefah, Kwame ^a   Chen, Yan ^a,b   Tan, Weihong ^a,b  

^a UNIVERSITY OF FLORIDA   (United States)

^b HUNAN UNIVERSITY   (China)

Author keywords

Aptamer; Cancer cell recognition; Complex media; Magnetic nanoparticle; Spin spin relaxation time

Indexed keywords

APTAMERS; CANCER CELLS; COMPLEX MEDIA; MAGNETIC NANOPARTICLES; SPIN-SPIN RELAXATION TIME;

NANOPARTICLES; PATTERN RECOGNITION;

CELLS;

APTAMER; NANOPARTICLE;

ARTICLE; HUMAN; MAGNETISM; NEOPLASM; PATHOLOGY; TUMOR CELL LINE;

APTAMERS, NUCLEOTIDE; CELL LINE, TUMOR; HUMANS; MAGNETICS; NANOPARTICLES; NEOPLASMS;

EID: 84864664747     PISSN: 19360851     EISSN: 1936086X     Source Type: Journal    
DOI: 10.1021/nn3002328     Document Type: Article

References (35)

1. Brody, E. N.; Gold, L. Aptamers as Therapeutic and Diagnostic Agents. Rev. Mol. Biotechnol. 2000, 74, 5-13.
2. Ellington, A. D.; Szostak, J. W. In Vitro Selection of RNA Molecules that Bind Specific Ligands. Nature 1990, 346, 818-822.
3. Tuerk, C.; Gold, L. Systematic Evolution of Ligands by Exponential Enrichment: RNA Ligands to Bacteriophage T4 DNA Polymerase. Science 1990, 249, 505-510.
4. Osborne, S. E.; Matsumura, I.; Ellington, A. D. Aptamers as Therapeutic and Diagnostic Reagents: Problems and Prospects. Curr. Opin. Chem. Biol. 1997, 1, 5-9.
5. Yang, C. J.; Jockusch, S.; Vicens, M.; Turro, N. J.; Tan, W. Light-Switching Excimer Probes for Rapid Protein Monitoring in Complex Biological Fluids. Proc. Natl. Acad. Sci. U. S. A. 2005, 102, 17278-17283.
6. Nutiu, R.; Li, Y. In Vitro Selection of Structure-Switching Signaling Aptamers. Angew. Chem., Int. Ed. 2005, 44, 1061-1065.
7. Herr, J. K.; Smith, J. E.; Medley, C. D.; Shangguan, D.; Tan, W. Aptamer-Conjugated Nanoparticles for Selective Collection and Detection of Cancer Cells. Anal. Chem. 2006, 78, 2918-2924.
8. Smith, J. E.; Medley, C. D.; Tang, Z.; Shangguan, D.; Lofton, C.; Tan, W. Aptamer-Conjugated Nanoparticles for the Collection and Detection of Multiple Cancer Cells. Anal. Chem. 2007, 79, 3075-3082.
9. Koh, I.; Josephson, L. Magnetic Nanoparticle Sensors. Sensors 2009, 9, 8130-8145.
10. Gossuin, Y.; Gillis, P.; Hocq, A.; Vuong, Q. L.; Roch, A. Magnetic Resonance Relaxation Properties of Superparamagnetic Particles. Wiley Interdisciplinary Reviews: Nanomed. Nanobiotechnol. 2009, 1, 299-310.
11. Haun, J. B.; Yoon, T.-J.; Lee, H.; Weissleder, R. Magnetic Nanoparticle Biosensors. Wiley Interdiscip. Rev.: Nanomed. Nanobiotechnol. 2010, 2, 291-304.
12. Weissleder, R.; Moore, A.; Mahmood, U.; Bhorade, R.; Benveniste, H.; Chiocca, E. A.; Basilion, J. P. In Vivo Magnetic Resonance Imaging of Transgene Expression. Nat. Med. 2000, 6, 351-354.
13. Zhao, M.; Beauregard, D. A.; Loizou, L.; Davletov, B.; Brindle, K. M. Non-Invasive Detection of Apoptosis using Magnetic Resonance Imaging and a Targeted Contrast Agent. Nat. Med. 2001, 7, 1241-1244.
14. Liu, W.; Dahnke, H.; Jordan, E. K.; Schaeffter, T.; Frank, J. A. In Vivo MRI using Positive-Contrast Techniques in Detection of Cells Labeled with Superparamagnetic Iron Oxide Nanoparticles. NMR Biomed. 2008, 21, 242-250.
15. Perez, J. M.; Josephson, L.; O'Loughlin, T.; Hogemann, D.; Weissleder, R. Magnetic Relaxation Switches Capable of Sensing Molecular Interactions. Nat. Biotechnol. 2002, 20, 816-820.
16. Yigit, M. V.; Mazumdar, D.; Lu, Y. MRI Detection of Thrombin with Aptamer Functionalized Superparamagnetic Iron Oxide Nanoparticles. Bioconjugate Chem. 2008, 19, 412-417.
17. Kaittanis, C.; Naser, S. A.; Perez, J. M. One-Step, Nanoparticle-Mediated Bacterial Detection with Magnetic Relaxation. Nano Lett. 2006, 7, 380-383.
18. Perez, J. M.; Simeone, F. J.; Saeki, Y.; Josephson, L.; Weissleder, R. Viral-Induced Self-Assembly of Magnetic Nanoparticles Allows the Detection of Viral Particles in Biological Media. J. Am. Chem. Soc. 2003, 125, 10192-10193.
19. Kaittanis, C.; Santra, S.; Perez, J. M. Role of Nanoparticle Valency in the Nondestructive Magnetic-Relaxation-Mediated Detection and Magnetic Isolation of Cells in Complex Media. J. Am. Chem. Soc. 2009, 131, 12780-12791.
20. Fang, X.; Tan, W. Aptamers Generated from Cell-SELEX for Molecular Medicine: A Chemical Biology Approach. Acc. Chem. Res. 2009, 43, 48-57.
21. Chen, Y.; Munteanu, A. C.; Huang, Y.-F.; Phillips, J.; Zhu, Z.; Mavros, M.; Tan, W. Mapping Receptor Density on Live Cells by Using Fluorescence Correlation Spectroscopy. Chem.; Eur. J. 2009, 15, 5327-5336.
22. Koh, I.; Hong, R.; Weissleder, R.; Josephson, L. Nanoparticle-Target Interactions Parallel Antibody-Protein Interactions. Anal. Chem. 2009, 81, 3618-3622.
23. Shangguan, D.; Li, Y.; Tang, Z.; Cao, Z. C.; Chen, H. W.; Mallikaratchy, P.; Sefah, K.; Yang, C. J.; Tan, W. Aptamers Evolved from Live Cells as Effective Molecular Probes for Cancer Study. Proc. Natl. Acad. Sci. U. S. A. 2006, 103, 11838-11843.
24. Shangguan, D.; Cao, Z.; Meng, L.; Mallikaratchy, P.; Sefah, K.; Wang, H.; Li, Y.; Tan, W. Cell-Specific Aptamer Probes for Membrane Protein Elucidation in Cancer Cells. J. Proteome Res. 2008, 7, 2133-2139.
25. Tang, Z.; Shangguan, D.; Wang, K.; Shi, H.; Sefah, K.; Mallikratchy, P.; Chen, H. W.; Li, Y.; Tan, W. Selection of Aptamers for Molecular Recognition and Characterization of Cancer Cells. Anal. Chem. 2007, 79, 4900-4907.
26. Mallikaratchy, P.; Tang, Z.; Kwame, S.; Meng, L.; Shangguan, D.; Tan, W. Aptamer Directly Evolved from Live Cells Recognizes Membrane Bound Immunoglobin Heavy Mu Chain in Burkitt's Lymphoma Cells. Mol. Cell. Proteomics 2007, 6, 2230-2238.
27. Deng, T.; Li, J.; Zhang, L.-L.; Jiang, J.-H.; Chen, J.-N.; Shen, G.-L.; Yu, R.-Q. A Sensitive Fluorescence Anisotropy Method for the Direct Detection of Cancer Cells in Whole Blood Based on Aptamer-Conjugated Near-Infrared Fluorescent Nanoparticles. Biosens. Bioelectron. 2011, 25, 1587-1591.
28. Medley, C. D.; Smith, J. E.; Tang, Z.; Wu, Y.; Bamrungsap, S.; Tan, W. Gold Nanoparticle-Based Colorimetric Assay for the Direct Detection of Cancerous Cells. Anal. Chem. 2008, 80, 1067-1072.
29. Lee, H.; Sun, E.; Ham, D.; Weissleder, R. Chip-NMR Biosensor for Detection and Molecular Analysis of Cells. Nat. Med. 2008, 14, 869-874.
30. Chen, Y.; O'Donoghue, M. B.; Huang, Y.-F.; Kang, H.; Phillips, J. A.; Chen, X.; Estevez, M. C.; Yang, C. J.; Tan, W. A Surface Energy Transfer Nanoruler for Measuring Binding Site Distances on Live Cell Surfaces. J. Am. Chem. Soc. 2010, 132, 16559-16570.
31. Sefah, K.; Tang, Z. W.; Shangguan, D. H.; Chen, H.; Lopez-Colon, D.; Li, Y.; Parekh, P.; Martin, J.; Meng, L.; Phillips, J. A.; Kim, Y. M.; Tan, W. H. Molecular Recognition of Acute Myeloid Leukemia using Aptamers. Leukemia 2009, 23, 235-244.
32. Sefah, K.; Meng, L.; Lopez-Colon, D.; Jimenez, E.; Liu, C.; Tan, W. DNA Aptamers as Molecular Probes for Colorectal Cancer Study. PLoS One 5, e14269.
33. Shangguan, D.; Meng, L.; Cao, Z. C.; Xiao, Z.; Fang, X.; Li, Y.; Cardona, D.; Witek, R. P.; Liu, C.; Tan, W. Identification of Liver Cancer-Specific Aptamers Using Whole Live Cells. Anal. Chem. 2008, 80, 721-728.
34. Lee, H.; Yoon, T.; Figueiredo, J.; Swirski, F. K.; Weissleder, R. Rapid Detection and Profiling of Cancer Cell in Fine-Needle Aspirates. Proc. Natl. Acad. Sci. U. S. A. 2009, 106, 12459-12464.
35. El-Boubbou, K.; Zhu, D. C.; Vasileiou, C.; Borhan, B.; Prosperi, D.; Li, W.; Huang, X. Magnetic Glyco-Nanoparticles: A Tool To Detect, Differentiate, and Unlock the Glyco-Codes of Cancer via Magnetic Resonance Imaging. J. Am. Chem. Soc. 2010, 132, 4990-4999.