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Volumn 209, Issue , 2012, Pages 19-45

Five task clusters that enable efficient and effective digitization of biological collections

Author keywords

ADBC; Biodiversity informatics; Biological specimen collections; Curation; Digitization; IDigBio; Imaging; Paleontological specimen collections; Task cluster; Workflow

Indexed keywords


EID: 84864590933     PISSN: 13132989     EISSN: 13132970     Source Type: Journal    
DOI: 10.3897/zookeys.209.3135     Document Type: Article
Times cited : (56)

References (43)
  • 1
    • 84875560924 scopus 로고    scopus 로고
    • Antweb, accessed 7.XI.2011
    • Antweb (2010) Automontage imaging guidelines. http://www.antweb.org/homepage/Ant-Web%20Imaging%20guidelines%20v01.pdf [accessed 7.XI.2011]
    • (2010) Automontage Imaging Guidelines
  • 2
    • 84875569853 scopus 로고    scopus 로고
    • Australian Museum, accessed 17.XI.2011]
    • Australian Museum (2011) A Guide to Handling and Digitizing Archival Material-Registers. http://australianmuseum.net.au/Uploads/Documents/22932/Archive%20Training%20Compressed.pdf [accessed 17.XI.2011]
    • (2011) A Guide to Handling and Digitizing Archival Material-Registers
  • 3
    • 84875561205 scopus 로고    scopus 로고
    • Utility (and shortcomings) of high resolution drawer imaging for remote curation and outreach
    • San Diego, CA December 11, accessed 2.X.2011
    • Bertone MA, Deans AR (2010) Utility (and shortcomings) of high resolution drawer imaging for remote curation and outreach. Presentation to the Entomological Collections Net work - Annual Meeting. San Diego, CA December 11, 2010. http://www.ecnweb.org/dev/files/17_Bertone_2010.pdf [accessed 2.X.2011]
    • (2010) Presentation to The Entomological Collections Net Work - Annual Meeting
    • Bertone, M.A.1    Deans, A.R.2
  • 4
    • 84875572906 scopus 로고    scopus 로고
    • Report on trial of SatScan tray scanner system by SmartDrive Ltd
    • accessed 17.XI.2011
    • Blagoderov V, Kitching I, Simonsen T, Smith VS (2010) Report on trial of SatScan tray scanner system by SmartDrive Ltd. Available from Nature Precedings http://precedings.nature.com/documents/4486/version/1/files/npre20104486-1.pdf [accessed 17.XI.2011]
    • (2010) Available From Nature Precedings
    • Blagoderov, V.1    Kitching, I.2    Simonsen, T.3    Smith, V.S.4
  • 5
    • 84992353816 scopus 로고    scopus 로고
    • Advanced Techniques for Imaging Parasitic Hymenoptera (Insecta)
    • Buffington ML, Burks RA, McNeil L (2005) Advanced Techniques for Imaging Parasitic Hymenoptera (Insecta). American Entomologist 51(1):50-56. http://www.entsoc.org/PDF/Pubs/Periodicals/AE/AE-2005/Spring/Buffington.pdf
    • (2005) American Entomologist , vol.51 , Issue.1 , pp. 50-56
    • Buffington, M.L.1    Burks, R.A.2    McNeil, L.3
  • 6
    • 33745301123 scopus 로고    scopus 로고
    • Global Biodiversity Informatics: Setting the Scene for a "New World" of Ecological Modeling
    • Canhos VP, Souza S, Giovanni R., Canhos DAL (2004) Global Biodiversity Informatics: Setting the Scene for a "New World" of Ecological Modeling. Biodiversity Informatics 1:1-13.
    • (2004) Biodiversity Informatics , vol.1 , pp. 1-13
    • Canhos, V.P.1    Souza, S.2    Giovanni, R.3    Canhos, D.A.L.4
  • 7
    • 33746618519 scopus 로고    scopus 로고
    • Version 1.0. Report for the Global Biodiversity Information Facility, Copenhagen
    • Chapman AD (2005a) Uses of Primary Species-Occurrence Data, Version 1.0. Report for the Global Biodiversity Information Facility, Copenhagen. http://www.gbif.org/orc/?doc_id=1300
    • (2005) Uses of Primary Species-Occurrence Data
    • Chapman, A.D.1
  • 9
    • 33746638518 scopus 로고    scopus 로고
    • Version 1. Copenhagen: Report for the Global Biodiversity Information Facility
    • Chapman A (2005c) Principles of Data Quality. Version 1. Copenhagen: Report for the Global Biodiversity Information Facility. http://www.gbif.org/orc/?doc_id=1229
    • (2005) Principles of Data Quality
    • Chapman, A.1
  • 11
    • 84875567161 scopus 로고    scopus 로고
    • Eds, Copenhagen: Global Biodiversity Information Facility. Available online at, accessed 21.XII.2011
    • Chapman AD, Wieczorek J (Eds) (2006) Biogeomancer Guide to Best Practices For Georeferencing. Copenhagen: Global Biodiversity Information Facility. Available online at http://www.gbif.org/orc/?doc_id=1288 [accessed 21.XII.2011]
    • (2006) Biogeomancer Guide to Best Practices For Georeferencing
    • Chapman, A.D.1    Wieczorek, J.2
  • 13
    • 69949179936 scopus 로고    scopus 로고
    • University of Arizona, accessed 28.X.2011
    • Cromey DW (2010) Digital Imaging: Ethics. University of Arizona. http://swehsc.pharmacy.arizona.edu/exppath/resources/pdf/Digital_Imaging_Ethics.pdf [accessed 28.X.2011]
    • (2010) Digital Imaging: Ethics
    • Cromey, D.W.1
  • 16
    • 78751556891 scopus 로고    scopus 로고
    • Semi-automated worflows for acquiring specimen data from label images in herbarium collections
    • [accessed 20.II
    • Granzow-de la Cerda Ì, Beach JH (2010) Semi-automated worflows for acquiring specimen data from label images in herbarium collections. Taxon 59(6):1830-1842 [accessed 20.II.2012].
    • (2010) Taxon , vol.59 , Issue.6 , pp. 1830-1842
    • Granzow-De la Cerda, I.1    Beach, J.H.2
  • 17
    • 84864589129 scopus 로고    scopus 로고
    • Documentation Standards Review: Procedures for Database Upgrades
    • accessed 22.V (2006)
    • Harpham S (2006) Documentation Standards Review: Procedures for Database Upgrades. Collection Forum 21(1-2):192-202 [accessed 22.V.2012]
    • (2012) Collection Forum , vol.21 , Issue.1-2 , pp. 192-202
    • Harpham, S.1
  • 18
    • 84864632362 scopus 로고    scopus 로고
    • Data concepts and their relevance for data capture in large scale digitisation of biological collections
    • doi: 10.3366/ijhac.2012.0042
    • Haston E, Cubey R, Harris DJ (2012) Data concepts and their relevance for data capture in large scale digitisation of biological collections. International Journal of Humanities and Arts Computing 6(1-2):111-119. doi: 10.3366/ijhac.2012.0042
    • (2012) International Journal of Humanities and Arts Computing , vol.6 , Issue.1-2 , pp. 111-119
    • Haston, E.1    Cubey, R.2    Harris, D.J.3
  • 22
    • 84864628667 scopus 로고
    • Automated Cataloging for Museum Collections: A model for decision and a guide to implementation
    • Lawrence, Kansas
    • Humphrey PS, Clausen AC (1977) Automated Cataloging for Museum Collections: a model for decision and a guide to implementation. Association of Systematics Collections, Lawrence, Kansas, 79 pp.
    • (1977) Association of Systematics Collections , pp. 79
    • Humphrey, P.S.1    Clausen, A.C.2
  • 23
    • 84875560629 scopus 로고    scopus 로고
    • Joint Photographic Experts Group, accessed 29.X.2010
    • Joint Photographic Experts Group. http://www.jpeg.org/committee.html [accessed 29.X.2010].
  • 24
    • 84875554817 scopus 로고    scopus 로고
    • JSTOR Plants Handbook
    • JSTOR Plants Handbook http://www.snsb.info/SNSBInfoOpenWiki/attach/Attachments/JSTOR-Plants-Handbook.pdf
  • 25
    • 84875575209 scopus 로고    scopus 로고
    • Canberra, Australia, CSIRO. Available a, accessed 6.III.2012
    • Kalms B (2012) Digitisation: A strategic approach for natural history collections. Canberra, Australia, CSIRO. Available at http://www.ala.org.au/wp-content/uploads/2011/10/Digitisation-guide-120223.pdf [accessed 6.III.2012]
    • (2012) Digitisation: A Strategic Approach For Natural History Collections
    • Kalms, B.1
  • 26
    • 70249142140 scopus 로고    scopus 로고
    • Accelerating taxonomic discovery through automated character extraction
    • accessed 28.XI.2011
    • La Salle J, Wheeler Q, Jackway P, Winterton S, Hobern DL (2009) Accelerating taxonomic discovery through automated character extraction. Zootaxa 2217: 43-55. http://www.mapress.com/zootaxa/2009/f/zt02217p055.pdf [accessed 28.XI.2011]
    • (2009) Zootaxa , vol.2217 , pp. 43-55
    • la Salle, J.1    Wheeler, Q.2    Jackway, P.3    Winterton, S.4    Hobern, D.L.5
  • 27
    • 84875564337 scopus 로고    scopus 로고
    • Lichens, Bryophytes and Climate Change LBCC
    • Lichens, Bryophytes and Climate Change LBCC http://lbcc.limnology.wisc.edu/
  • 29
    • 84875568288 scopus 로고    scopus 로고
    • accessed 18.XI.2011
    • See also http://www.nsf.gov/funding/pgm_summ.jsp?pims_id=503559 [accessed 18.XI.2011]
  • 30
    • 0042162545 scopus 로고    scopus 로고
    • A Data Model for Invertebrate Paleontological Collections Information
    • White RD, Allmon WD (Eds) (2000, National Science Foundation Workshop at the North American Paleonotological Conference, Washington DC, June 7-14, 1996. The Paleonotological Society, New Haven (USA)
    • Morris PJ (2000) A Data Model for Invertebrate Paleontological Collections Information. In: White RD, Allmon WD (Eds) (2000) Guidelines for the Management and Curation of Invertebrate Fossil Collections Including a Data Model and Standards for Computerization. National Science Foundation Workshop at the North American Paleonotological Conference, Washington DC, June 7-14, 1996. The Paleonotological Society, New Haven (USA), 105-108.
    • (2000) Guidelines For the Management and Curation of Invertebrate Fossil Collections Including a Data Model and Standards For Computerization , pp. 105-108
    • Morris, P.J.1
  • 31
    • 34248998070 scopus 로고    scopus 로고
    • Relational Database Design and Implementation for Biodiversity Informatics
    • accessed 5.III.2011
    • Morris PJ (2005) Relational Database Design and Implementation for Biodiversity Informatics. Phyloinformatics 7:1-66. http://systbio.org/files/phyloinformatics/7.pdf [accessed 5.III.2011]
    • (2005) Phyloinformatics , vol.7 , pp. 1-66
    • Morris, P.J.1
  • 33
    • 84864586702 scopus 로고    scopus 로고
    • Tools, Techniques, and Code for Supporting Image Databases of Natural History Collections Materials
    • accessed 22.V 2012
    • Morris PJ, Macklin JA (2006) Tools, Techniques, and Code for Supporting Image Databases of Natural History Collections Materials. Collection Forum 21(1-2): 203-222 [accessed 22.V.2012]
    • (2006) Collection Forum , vol.21 , Issue.1-2 , pp. 203-222
    • Morris, P.J.1    Macklin, J.A.2
  • 34
    • 84875563318 scopus 로고    scopus 로고
    • Digitizing the Yale Collections-it takes a Village
    • San Diego, CA December 11, accessed 2.X.2011
    • Munstermann L, Gall L (2010) Digitizing the Yale Collections-it takes a Village. Presentation to the Entomological Collections Network--Annual Meeting. San Diego, CA December 11, 2010. http://www.ecnweb.org/dev/files/gall-ecn-posted.pdf [accessed 2.X.2011]
    • (2010) Presentation to The Entomological Collections Network--Annual Meeting
    • Munstermann, L.1    Gall, L.2
  • 35
    • 84875561748 scopus 로고    scopus 로고
    • National Science Foundation, Program Solicitation, NSF 11-567, [accessed 1.X.2011]
    • National Science Foundation (2011) Advancing Digitization of Biological Collections (ADBC), Program Solicitation, NSF 11-567, p.4. http://www.nsf.gov/pubs/2011/nsf11567/nsf11567.pdf [accessed 1.X.2011]
    • (2011) Advancing Digitization of Biological Collections (ADBC , pp. 4
  • 36
    • 84864613343 scopus 로고
    • Curation of inverterbrate fossil collections at the Milwaukee Public Museum
    • Sumpter PM (1991) Curation of inverterbrate fossil collections at the Milwaukee Public Museum. Collection Forum 7(1):1-9.
    • (1991) Collection Forum , vol.7 , Issue.1 , pp. 1-9
    • Sumpter, P.M.1
  • 37
    • 84875572298 scopus 로고    scopus 로고
    • Tagged Image File Format TIFF, accessed 29.X.2010
    • Tagged Image File Format TIFF. http://partners.adobe.com/public/developer/tiff/index.html [accessed 29.X.2010]
  • 38
    • 84875574207 scopus 로고    scopus 로고
    • Australian Museum, accessed 17.XI.2011
    • Tann J, Flemons P (2008) Data capture of specimen labels using volunteers. Australian Museum. http://australianmuseum.net.au/Uploads/Documents/23183/Data%20Capture%20of%20specimen%20labels%20using%20volunteers%20-%20Tann%20and%20Flemons%202008.pdf [accessed 17.XI.2011]
    • (2008) Data Capture of Specimen Labels Using Volunteers
    • Tann, J.1    Flemons, P.2
  • 40
    • 84875563297 scopus 로고    scopus 로고
    • Tri-Trophic Thematic Collection Network TTD
    • Tri-Trophic Thematic Collection Network TTD. http://sites.google.com/site/ttdtcn/
  • 41
    • 84875557016 scopus 로고    scopus 로고
    • Virtual Biodiversity Research and Access Network for Taxonomy ViBRANT
    • Virtual Biodiversity Research and Access Network for Taxonomy ViBRANT. http://vbrant.eu/
  • 42
    • 3042650863 scopus 로고    scopus 로고
    • The point-radius method for georeferencing locality descriptions and calculating associated uncertainty
    • doi: 10.1080/13658810412331280211
    • Wieczorek J, Guo Q, Hijmans R (2004) The point-radius method for georeferencing locality descriptions and calculating associated uncertainty. International Journal of Geographical Information Science 18(8): 745-767. http://herpnet.org/herpnet/documents/wieczorek.pdf, doi: 10.1080/13658810412331280211
    • (2004) International Journal of Geographical Information Science , vol.18 , Issue.8 , pp. 745-767
    • Wieczorek, J.1    Guo, Q.2    Hijmans, R.3
  • 43
    • 84875564276 scopus 로고    scopus 로고
    • ZXing (Zebra Crossing, accessed 25.I.2012
    • ZXing (Zebra Crossing) http://code.google.com/p/zxing/ [accessed 25.I.2012]


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.