-
1
-
-
75849145292
-
Expansion of the eukaryotic proteome by alternative splicing
-
Nilsen TW, Graveley BR, (2010) Expansion of the eukaryotic proteome by alternative splicing. Nature 463: 457-463.
-
(2010)
Nature
, vol.463
, pp. 457-463
-
-
Nilsen, T.W.1
Graveley, B.R.2
-
2
-
-
0037062982
-
Alternative pre-mRNA splicing and proteome expansion in metazoans
-
Maniatis T, Tasic B, (2002) Alternative pre-mRNA splicing and proteome expansion in metazoans. Nature 418: 236-243.
-
(2002)
Nature
, vol.418
, pp. 236-243
-
-
Maniatis, T.1
Tasic, B.2
-
3
-
-
0042671357
-
Pre-mRNA splicing: awash in a sea of proteins
-
Jurica MS, Moore MJ, (2003) Pre-mRNA splicing: awash in a sea of proteins. Mol Cell 12: 5-14.
-
(2003)
Mol Cell
, vol.12
, pp. 5-14
-
-
Jurica, M.S.1
Moore, M.J.2
-
4
-
-
0030911051
-
Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals
-
Abovich N, Rosbash M, (1997) Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals. Cell 89: 403-412.
-
(1997)
Cell
, vol.89
, pp. 403-412
-
-
Abovich, N.1
Rosbash, M.2
-
5
-
-
0029949698
-
Mammalian splicing factor SF1 is encoded by variant cDNAs and binds to RNA
-
Arning S, Gruter P, Bilbe G, Kramer A, (1996) Mammalian splicing factor SF1 is encoded by variant cDNAs and binds to RNA. RNA 2: 794-810.
-
(1996)
RNA
, vol.2
, pp. 794-810
-
-
Arning, S.1
Gruter, P.2
Bilbe, G.3
Kramer, A.4
-
6
-
-
0022135603
-
Multiple factors including the small nuclear ribonucleoproteins U1 and U2 are necessary for pre-mRNA splicing in vitro
-
Krainer AR, Maniatis T, (1985) Multiple factors including the small nuclear ribonucleoproteins U1 and U2 are necessary for pre-mRNA splicing in vitro. Cell 42: 725-736.
-
(1985)
Cell
, vol.42
, pp. 725-736
-
-
Krainer, A.R.1
Maniatis, T.2
-
7
-
-
0028556367
-
Dynamic RNA-RNA interactions in the spliceosome
-
Madhani HD, Guthrie C, (1994) Dynamic RNA-RNA interactions in the spliceosome. Annu Rev Genet 28: 1-26.
-
(1994)
Annu Rev Genet
, vol.28
, pp. 1-26
-
-
Madhani, H.D.1
Guthrie, C.2
-
8
-
-
0033576625
-
Inhibition of msl-2 splicing by Sex-lethal reveals interaction between U2AF35 and the 3′ splice site AG
-
Merendino L, Guth S, Bilbao D, Martinez C, Valcarcel J, (1999) Inhibition of msl-2 splicing by Sex-lethal reveals interaction between U2AF35 and the 3′ splice site AG. Nature 402: 838-841.
-
(1999)
Nature
, vol.402
, pp. 838-841
-
-
Merendino, L.1
Guth, S.2
Bilbao, D.3
Martinez, C.4
Valcarcel, J.5
-
9
-
-
0033576626
-
Functional recognition of the 3′ splice site AG by the splicing factor U2AF35
-
Wu S, Romfo CM, Nilsen TW, Green MR, (1999) Functional recognition of the 3′ splice site AG by the splicing factor U2AF35. Nature 402: 832-835.
-
(1999)
Nature
, vol.402
, pp. 832-835
-
-
Wu, S.1
Romfo, C.M.2
Nilsen, T.W.3
Green, M.R.4
-
10
-
-
0026026981
-
Biochemical characterization of U2 snRNP auxiliary factor: an essential pre-mRNA splicing factor with a novel intranuclear distribution
-
Zamore PD, Green MR, (1991) Biochemical characterization of U2 snRNP auxiliary factor: an essential pre-mRNA splicing factor with a novel intranuclear distribution. EMBO J 10: 207-214.
-
(1991)
EMBO J
, vol.10
, pp. 207-214
-
-
Zamore, P.D.1
Green, M.R.2
-
11
-
-
0033576591
-
Both subunits of U2AF recognize the 3′ splice site in Caenorhabditis elegans
-
Zorio DA, Blumenthal T, (1999) Both subunits of U2AF recognize the 3′ splice site in Caenorhabditis elegans. Nature 402: 835-838.
-
(1999)
Nature
, vol.402
, pp. 835-838
-
-
Zorio, D.A.1
Blumenthal, T.2
-
12
-
-
0034069505
-
Mechanisms of fidelity in pre-mRNA splicing
-
Reed R, (2000) Mechanisms of fidelity in pre-mRNA splicing. Curr Opin Cell Biol 12: 340-345.
-
(2000)
Curr Opin Cell Biol
, vol.12
, pp. 340-345
-
-
Reed, R.1
-
14
-
-
34548758543
-
Splicing in disease: disruption of the splicing code and the decoding machinery
-
Wang GS, Cooper TA, (2007) Splicing in disease: disruption of the splicing code and the decoding machinery. Nat Rev Genet 8: 749-761.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 749-761
-
-
Wang, G.S.1
Cooper, T.A.2
-
15
-
-
0034529379
-
Kinetic role for mammalian SF1/BBP in spliceosome assembly and function after polypyrimidine tract recognition by U2AF
-
Guth S, Valcarcel J, (2000) Kinetic role for mammalian SF1/BBP in spliceosome assembly and function after polypyrimidine tract recognition by U2AF. J Biol Chem 275: 38059-38066.
-
(2000)
J Biol Chem
, vol.275
, pp. 38059-38066
-
-
Guth, S.1
Valcarcel, J.2
-
16
-
-
0345593813
-
Transient interaction of BBP/ScSF1 and Mud2 with the splicing machinery affects the kinetics of spliceosome assembly
-
Rutz B, Seraphin B, (1999) Transient interaction of BBP/ScSF1 and Mud2 with the splicing machinery affects the kinetics of spliceosome assembly. RNA 5: 819-831.
-
(1999)
RNA
, vol.5
, pp. 819-831
-
-
Rutz, B.1
Seraphin, B.2
-
17
-
-
14844312915
-
Human splicing factor SF3a, but not SF1, is essential for pre-mRNA splicing in vivo
-
Tanackovic G, Kramer A, (2005) Human splicing factor SF3a, but not SF1, is essential for pre-mRNA splicing in vivo. Mol Biol Cell 16: 1366-1377.
-
(2005)
Mol Biol Cell
, vol.16
, pp. 1366-1377
-
-
Tanackovic, G.1
Kramer, A.2
-
18
-
-
34247255773
-
Transcript specificity in yeast pre-mRNA splicing revealed by mutations in core spliceosomal components
-
doi:10.1371/journal.pbio.0050090
-
Pleiss JA, Whitworth GB, Bergkessel M, Guthrie C, (2007) Transcript specificity in yeast pre-mRNA splicing revealed by mutations in core spliceosomal components. PLoS Biol 5: e90 doi:10.1371/journal.pbio.0050090.
-
(2007)
PLoS Biol
, vol.5
-
-
Pleiss, J.A.1
Whitworth, G.B.2
Bergkessel, M.3
Guthrie, C.4
-
19
-
-
2942648436
-
Genome-wide analysis reveals an unexpected function for the Drosophila splicing factor U2AF50 in the nuclear export of intronless mRNAs
-
Blanchette M, Labourier E, Green RE, Brenner SE, Rio DC, (2004) Genome-wide analysis reveals an unexpected function for the Drosophila splicing factor U2AF50 in the nuclear export of intronless mRNAs. Mol Cell 14: 775-786.
-
(2004)
Mol Cell
, vol.14
, pp. 775-786
-
-
Blanchette, M.1
Labourier, E.2
Green, R.E.3
Brenner, S.E.4
Rio, D.C.5
-
20
-
-
0141885134
-
sup-9, sup-10, and unc-93 may encode components of a two-pore K+ channel that coordinates muscle contraction in Caenorhabditis elegans
-
de la Cruz IP, Levin JZ, Cummins C, Anderson P, Horvitz HR, (2003) sup-9, sup-10, and unc-93 may encode components of a two-pore K+ channel that coordinates muscle contraction in Caenorhabditis elegans. J Neurosci 23: 9133-9145.
-
(2003)
J Neurosci
, vol.23
, pp. 9133-9145
-
-
de la Cruz, I.P.1
Levin, J.Z.2
Cummins, C.3
Anderson, P.4
Horvitz, H.R.5
-
21
-
-
0022721739
-
A visible allele of the muscle gene sup-10 X of C. elegans
-
Greenwald I, Horvitz HR, (1986) A visible allele of the muscle gene sup-10 X of C. elegans. Genetics 113: 63-72.
-
(1986)
Genetics
, vol.113
, pp. 63-72
-
-
Greenwald, I.1
Horvitz, H.R.2
-
22
-
-
0019061841
-
unc-93(e1500): A behavioral mutant of Caenorhabditis elegans that defines a gene with a wild-type null phenotype
-
Greenwald IS, Horvitz HR, (1980) unc-93(e1500): A behavioral mutant of Caenorhabditis elegans that defines a gene with a wild-type null phenotype. Genetics 96: 147-164.
-
(1980)
Genetics
, vol.96
, pp. 147-164
-
-
Greenwald, I.S.1
Horvitz, H.R.2
-
23
-
-
0026532236
-
The Caenorhabditis elegans unc-93 gene encodes a putative transmembrane protein that regulates muscle contraction
-
Levin JZ, Horvitz HR, (1992) The Caenorhabditis elegans unc-93 gene encodes a putative transmembrane protein that regulates muscle contraction. J Cell Biol 117: 143-155.
-
(1992)
J Cell Biol
, vol.117
, pp. 143-155
-
-
Levin, J.Z.1
Horvitz, H.R.2
-
24
-
-
34247484007
-
The interaction between the ER membrane protein UNC93B and TLR3, 7, and 9 is crucial for TLR signaling
-
Brinkmann MM, Spooner E, Hoebe K, Beutler B, Ploegh HL, et al. (2007) The interaction between the ER membrane protein UNC93B and TLR3, 7, and 9 is crucial for TLR signaling. J Cell Biol 177: 265-275.
-
(2007)
J Cell Biol
, vol.177
, pp. 265-275
-
-
Brinkmann, M.M.1
Spooner, E.2
Hoebe, K.3
Beutler, B.4
Ploegh, H.L.5
-
25
-
-
33750016788
-
Herpes simplex virus encephalitis in human UNC-93B deficiency
-
Casrouge A, Zhang SY, Eidenschenk C, Jouanguy E, Puel A, et al. (2006) Herpes simplex virus encephalitis in human UNC-93B deficiency. Science 314: 308-312.
-
(2006)
Science
, vol.314
, pp. 308-312
-
-
Casrouge, A.1
Zhang, S.Y.2
Eidenschenk, C.3
Jouanguy, E.4
Puel, A.5
-
26
-
-
40749098665
-
UNC93B1 delivers nucleotide-sensing toll-like receptors to endolysosomes
-
Kim YM, Brinkmann MM, Paquet ME, Ploegh HL, (2008) UNC93B1 delivers nucleotide-sensing toll-like receptors to endolysosomes. Nature 452: 234-238.
-
(2008)
Nature
, vol.452
, pp. 234-238
-
-
Kim, Y.M.1
Brinkmann, M.M.2
Paquet, M.E.3
Ploegh, H.L.4
-
27
-
-
36849020513
-
Assessing the function of human UNC-93B in Toll-like receptor signaling and major histocompatibility complex II response
-
Koehn J, Huesken D, Jaritz M, Rot A, Zurini M, et al. (2007) Assessing the function of human UNC-93B in Toll-like receptor signaling and major histocompatibility complex II response. Hum Immunol 68: 871-878.
-
(2007)
Hum Immunol
, vol.68
, pp. 871-878
-
-
Koehn, J.1
Huesken, D.2
Jaritz, M.3
Rot, A.4
Zurini, M.5
-
28
-
-
31344466165
-
The Unc93b1 mutation 3d disrupts exogenous antigen presentation and signaling via Toll-like receptors 3, 7 and 9
-
Tabeta K, Hoebe K, Janssen EM, Du X, Georgel P, et al. (2006) The Unc93b1 mutation 3d disrupts exogenous antigen presentation and signaling via Toll-like receptors 3, 7 and 9. Nat Immunol 7: 156-164.
-
(2006)
Nat Immunol
, vol.7
, pp. 156-164
-
-
Tabeta, K.1
Hoebe, K.2
Janssen, E.M.3
Du, X.4
Georgel, P.5
-
29
-
-
73649087945
-
Mutations in the Caenorhabditis elegans U2AF large subunit UAF-1 alter the choice of a 3′ splice site in vivo
-
doi:10.1371/journal.pgen.1000708
-
Ma L, Horvitz HR, (2009) Mutations in the Caenorhabditis elegans U2AF large subunit UAF-1 alter the choice of a 3′ splice site in vivo. PLoS Genet 5: e1000708 doi:10.1371/journal.pgen.1000708.
-
(2009)
PLoS Genet
, vol.5
-
-
Ma, L.1
Horvitz, H.R.2
-
30
-
-
81755161587
-
In vivo effects on intron retention and exon skipping by the U2AF large subunit and SF1/BBP in the nematode Caenorhabditis elegans
-
Ma L, Tan Z, Teng Y, Hoersch S, Horvitz HR, (2011) In vivo effects on intron retention and exon skipping by the U2AF large subunit and SF1/BBP in the nematode Caenorhabditis elegans. RNA 17: 2201-2211.
-
(2011)
RNA
, vol.17
, pp. 2201-2211
-
-
Ma, L.1
Tan, Z.2
Teng, Y.3
Hoersch, S.4
Horvitz, H.R.5
-
31
-
-
0027216508
-
Three new classes of mutations in the Caenorhabditis elegans muscle gene sup-9
-
Levin JZ, Horvitz HR, (1993) Three new classes of mutations in the Caenorhabditis elegans muscle gene sup-9. Genetics 135: 53-70.
-
(1993)
Genetics
, vol.135
, pp. 53-70
-
-
Levin, J.Z.1
Horvitz, H.R.2
-
32
-
-
0026667717
-
Characterization of an associated microfibril protein through recombinant DNA techniques
-
Horrigan SK, Rich CB, Streeten BW, Li ZY, Foster JA, (1992) Characterization of an associated microfibril protein through recombinant DNA techniques. J Biol Chem 267: 10087-10095.
-
(1992)
J Biol Chem
, vol.267
, pp. 10087-10095
-
-
Horrigan, S.K.1
Rich, C.B.2
Streeten, B.W.3
Li, Z.Y.4
Foster, J.A.5
-
33
-
-
57649156012
-
Drosophila MFAP1 is required for pre-mRNA processing and G2/M progression
-
Andersen DS, Tapon N, (2008) Drosophila MFAP1 is required for pre-mRNA processing and G2/M progression. J Biol Chem 283: 31256-31267.
-
(2008)
J Biol Chem
, vol.283
, pp. 31256-31267
-
-
Andersen, D.S.1
Tapon, N.2
-
34
-
-
0042208446
-
Genetic interactions with CLF1 identify additional pre-mRNA splicing factors and a link between activators of yeast vesicular transport and splicing
-
Vincent K, Wang Q, Jay S, Hobbs K, Rymond BC, (2003) Genetic interactions with CLF1 identify additional pre-mRNA splicing factors and a link between activators of yeast vesicular transport and splicing. Genetics 164: 895-907.
-
(2003)
Genetics
, vol.164
, pp. 895-907
-
-
Vincent, K.1
Wang, Q.2
Jay, S.3
Hobbs, K.4
Rymond, B.C.5
-
35
-
-
0026663165
-
PRP38 encodes a yeast protein required for pre-mRNA splicing and maintenance of stable U6 small nuclear RNA levels
-
Blanton S, Srinivasan A, Rymond BC, (1992) PRP38 encodes a yeast protein required for pre-mRNA splicing and maintenance of stable U6 small nuclear RNA levels. Mol Cell Biol 12: 3939-3947.
-
(1992)
Mol Cell Biol
, vol.12
, pp. 3939-3947
-
-
Blanton, S.1
Srinivasan, A.2
Rymond, B.C.3
-
36
-
-
0037073946
-
Small nuclear ribonucleoprotein remodeling during catalytic activation of the spliceosome
-
Makarov EM, Makarova OV, Urlaub H, Gentzel M, Will CL, et al. (2002) Small nuclear ribonucleoprotein remodeling during catalytic activation of the spliceosome. Science 298: 2205-2208.
-
(2002)
Science
, vol.298
, pp. 2205-2208
-
-
Makarov, E.M.1
Makarova, O.V.2
Urlaub, H.3
Gentzel, M.4
Will, C.L.5
-
37
-
-
0036674269
-
Large-scale proteomic analysis of the human spliceosome
-
Rappsilber J, Ryder U, Lamond AI, Mann M, (2002) Large-scale proteomic analysis of the human spliceosome. Genome Res 12: 1231-1245.
-
(2002)
Genome Res
, vol.12
, pp. 1231-1245
-
-
Rappsilber, J.1
Ryder, U.2
Lamond, A.I.3
Mann, M.4
-
38
-
-
0037068447
-
Comprehensive proteomic analysis of the human spliceosome
-
Zhou Z, Licklider LJ, Gygi SP, Reed R, (2002) Comprehensive proteomic analysis of the human spliceosome. Nature 419: 182-185.
-
(2002)
Nature
, vol.419
, pp. 182-185
-
-
Zhou, Z.1
Licklider, L.J.2
Gygi, S.P.3
Reed, R.4
-
39
-
-
0016063911
-
The genetics of Caenorhabditis elegans
-
Brenner S, (1974) The genetics of Caenorhabditis elegans. Genetics 77: 71-94.
-
(1974)
Genetics
, vol.77
, pp. 71-94
-
-
Brenner, S.1
-
40
-
-
0034978075
-
Rapid gene mapping in Caenorhabditis elegans using a high density polymorphism map
-
Wicks SR, Yeh RT, Gish WR, Waterston RH, Plasterk RH, (2001) Rapid gene mapping in Caenorhabditis elegans using a high density polymorphism map. Nat Genet 28: 160-164.
-
(2001)
Nat Genet
, vol.28
, pp. 160-164
-
-
Wicks, S.R.1
Yeh, R.T.2
Gish, W.R.3
Waterston, R.H.4
Plasterk, R.H.5
-
41
-
-
0027154645
-
Two types of sites required for meiotic chromosome pairing in Caenorhabditis elegans
-
McKim KS, Peters K, Rose AM, (1993) Two types of sites required for meiotic chromosome pairing in Caenorhabditis elegans. Genetics 134: 749-768.
-
(1993)
Genetics
, vol.134
, pp. 749-768
-
-
McKim, K.S.1
Peters, K.2
Rose, A.M.3
-
42
-
-
38449096299
-
Genetic balancers
-
doi/10.1895/wormbook.1891.1897.1891,
-
Edgley ML, Baillie DL, Riddle DL, Rose AM, (2006) Genetic balancers. WormBook doi/10.1895/wormbook.1891.1897.1891,http://www.wormbook.org.
-
(2006)
WormBook
-
-
Edgley, M.L.1
Baillie, D.L.2
Riddle, D.L.3
Rose, A.M.4
-
43
-
-
0025940629
-
The two-hybrid system: a method to identify and clone genes for proteins that interact with a protein of interest
-
Chien CT, Bartel PL, Sternglanz R, Fields S, (1991) The two-hybrid system: a method to identify and clone genes for proteins that interact with a protein of interest. Proc Natl Acad Sci U S A 88: 9578-9582.
-
(1991)
Proc Natl Acad Sci U S A
, vol.88
, pp. 9578-9582
-
-
Chien, C.T.1
Bartel, P.L.2
Sternglanz, R.3
Fields, S.4
-
44
-
-
0024406857
-
A novel genetic system to detect protein-protein interactions
-
Fields S, Song O, (1989) A novel genetic system to detect protein-protein interactions. Nature 340: 245-246.
-
(1989)
Nature
, vol.340
, pp. 245-246
-
-
Fields, S.1
Song, O.2
-
45
-
-
0002004247
-
Preparation of yeast DNA
-
Hoffman CS, (2011) Preparation of yeast DNA. Curr Protoc Mol Biol 13: 11.
-
(2011)
Curr Protoc Mol Biol
, vol.13
, pp. 11
-
-
Hoffman, C.S.1
-
46
-
-
0035941485
-
Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans
-
Timmons L, Court DL, Fire A, (2001) Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans. Gene 263: 103-112.
-
(2001)
Gene
, vol.263
, pp. 103-112
-
-
Timmons, L.1
Court, D.L.2
Fire, A.3
-
47
-
-
0037448540
-
Systematic functional analysis of the Caenorhabditis elegans genome using RNAi
-
Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, et al. (2003) Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 421: 231-237.
-
(2003)
Nature
, vol.421
, pp. 231-237
-
-
Kamath, R.S.1
Fraser, A.G.2
Dong, Y.3
Poulin, G.4
Durbin, R.5
-
48
-
-
7444270371
-
Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library
-
Rual JF, Ceron J, Koreth J, Hao T, Nicot AS, et al. (2004) Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library. Genome Res 14: 2162-2168.
-
(2004)
Genome Res
, vol.14
, pp. 2162-2168
-
-
Rual, J.F.1
Ceron, J.2
Koreth, J.3
Hao, T.4
Nicot, A.S.5
-
49
-
-
0033714116
-
C. elegans locomotory rate is modulated by the environment through a dopaminergic pathway and by experience through a serotonergic pathway
-
Sawin ER, Ranganathan R, Horvitz HR, (2000) C. elegans locomotory rate is modulated by the environment through a dopaminergic pathway and by experience through a serotonergic pathway. Neuron 26: 619-631.
-
(2000)
Neuron
, vol.26
, pp. 619-631
-
-
Sawin, E.R.1
Ranganathan, R.2
Horvitz, H.R.3
-
50
-
-
0025942107
-
Efficient gene transfer in C.elegans: extrachromosomal maintenance and integration of transforming sequences
-
Mello CC, Kramer JM, Stinchcomb D, Ambros V, (1991) Efficient gene transfer in C.elegans: extrachromosomal maintenance and integration of transforming sequences. EMBO J 10: 3959-3970.
-
(1991)
EMBO J
, vol.10
, pp. 3959-3970
-
-
Mello, C.C.1
Kramer, J.M.2
Stinchcomb, D.3
Ambros, V.4
|