-
1
-
-
34247275586
-
A physiological method for the quantitative measurement of microbial biomass in soils
-
Anderson J.P.L., Domsch K.H. A physiological method for the quantitative measurement of microbial biomass in soils. Soil Biol. Biochem. 1978, 10:215-221.
-
(1978)
Soil Biol. Biochem.
, vol.10
, pp. 215-221
-
-
Anderson, J.P.L.1
Domsch, K.H.2
-
2
-
-
0029827845
-
Death of the Escherichia coli K-12 strain W3110 in soil and water
-
Bogosian G., Sammons L.E., Morris P.J.L., O'Neil J.P., Heitkamp M.A., Weber D.B. Death of the Escherichia coli K-12 strain W3110 in soil and water. Appl. Environ. Microbiol. 1996, 62:4114-4120.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 4114-4120
-
-
Bogosian, G.1
Sammons, L.E.2
Morris, P.J.L.3
O'Neil, J.P.4
Heitkamp, M.A.5
Weber, D.B.6
-
3
-
-
77649233414
-
Why the need for qPCR publication guidelines? The case for MIQE
-
Bustin S.A. Why the need for qPCR publication guidelines? The case for MIQE. Methods 2010, 50:217-226.
-
(2010)
Methods
, vol.50
, pp. 217-226
-
-
Bustin, S.A.1
-
5
-
-
34447522216
-
Nitric oxide reductase-targeted real-time PCR quantification of denitrifier populations in soil
-
Dandie C.E., Miller M.N., Burton D.L., Zebarth B.J., Trevors J.Y., Goyer C. Nitric oxide reductase-targeted real-time PCR quantification of denitrifier populations in soil. Appl. Environ. Microbiol. 2007, 73:4250-4258.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 4250-4258
-
-
Dandie, C.E.1
Miller, M.N.2
Burton, D.L.3
Zebarth, B.J.4
Trevors, J.Y.5
Goyer, C.6
-
6
-
-
77049092964
-
Long-term effect of re-vegetation on the microbial community of a severely eroded soil in sub-tropical China
-
Deng H., Zhang B., Yin R., Wang H.-L., Mitchell S.M., Griffiths B.S., Daniell T.J. Long-term effect of re-vegetation on the microbial community of a severely eroded soil in sub-tropical China. Plant Soil 2010, 328:447-458.
-
(2010)
Plant Soil
, vol.328
, pp. 447-458
-
-
Deng, H.1
Zhang, B.2
Yin, R.3
Wang, H.-L.4
Mitchell, S.M.5
Griffiths, B.S.6
Daniell, T.J.7
-
7
-
-
0003656150
-
-
John Wiley & Sons, Inc., New York, U.S.A.
-
Draper N.R., Smith H. Applied Regression Analysis 1998, John Wiley & Sons, Inc., New York, U.S.A. 3rd edition.
-
(1998)
Applied Regression Analysis
-
-
Draper, N.R.1
Smith, H.2
-
8
-
-
0029663947
-
The use of phospholipid analysis to estimate bacterial and fungal biomass in soil
-
Frostegård A., Bååth E. The use of phospholipid analysis to estimate bacterial and fungal biomass in soil. Biol. Fertil. Soils 1996, 22:59-65.
-
(1996)
Biol. Fertil. Soils
, vol.22
, pp. 59-65
-
-
Frostegård, A.1
Bååth, E.2
-
9
-
-
34447642840
-
Microbial and microfaunal community structure in cropping systems with genetically modified plants
-
Griffiths B.S., Caul S., Thompson J., Birch A.N.E., Cortet J., Andersen M.N., Krogh P.H. Microbial and microfaunal community structure in cropping systems with genetically modified plants. Pedobiologia 2007, 51:195-206.
-
(2007)
Pedobiologia
, vol.51
, pp. 195-206
-
-
Griffiths, B.S.1
Caul, S.2
Thompson, J.3
Birch, A.N.E.4
Cortet, J.5
Andersen, M.N.6
Krogh, P.H.7
-
10
-
-
0035144174
-
Quantification of ammonia-oxidizing bacteria in arable soil by real-time PCR
-
Hermansson A., Lindgren P.-E. Quantification of ammonia-oxidizing bacteria in arable soil by real-time PCR. Appl. Environ. Microbiol. 2001, 67:972-976.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 972-976
-
-
Hermansson, A.1
Lindgren, P.-E.2
-
11
-
-
25844436935
-
Microbial response to heavy metal-polluted soils: community analysis from phospholipids-linked fatty acids and ester-linked fatty acids extracts
-
Hinojosa M.B., Carreira J.A., Garcia-Ruíz R., Dick R.P. Microbial response to heavy metal-polluted soils: community analysis from phospholipids-linked fatty acids and ester-linked fatty acids extracts. J. Environ. Qual. 2005, 34:1789-1800.
-
(2005)
J. Environ. Qual.
, vol.34
, pp. 1789-1800
-
-
Hinojosa, M.B.1
Carreira, J.A.2
Garcia-Ruíz, R.3
Dick, R.P.4
-
12
-
-
77950595690
-
Culture-independent molecular techniques for soil microbial ecology
-
Hirsch P.R., Mauchline T.H., Clark I.M. Culture-independent molecular techniques for soil microbial ecology. Soil Biol. Biochem. 2011, 42:878-887.
-
(2011)
Soil Biol. Biochem.
, vol.42
, pp. 878-887
-
-
Hirsch, P.R.1
Mauchline, T.H.2
Clark, I.M.3
-
13
-
-
0030782656
-
A simple, efficient method for separation of humic substances and DNA from environmental samples
-
Jackson C.R., Harper J.P., Willoughby D., Rosen E.E., Churchill P.F. A simple, efficient method for separation of humic substances and DNA from environmental samples. Appl. Environ. Microbiol. 1997, 63:4993-4995.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 4993-4995
-
-
Jackson, C.R.1
Harper, J.P.2
Willoughby, D.3
Rosen, E.E.4
Churchill, P.F.5
-
14
-
-
0030438385
-
Estimation of the abundance of an uncultured soil bacterial strain by a competitive quantitative PCR method
-
Lee S.Y., Bollinger J., Bezdicek D., Ogram A. Estimation of the abundance of an uncultured soil bacterial strain by a competitive quantitative PCR method. Appl. Environ. Microbiol. 1996, 62:3787-3793.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 3787-3793
-
-
Lee, S.Y.1
Bollinger, J.2
Bezdicek, D.3
Ogram, A.4
-
15
-
-
79960095376
-
Development of a real-time PCR assay for detection and quantification of Rhizobium leguminosarum bacteria and discrimination between different biovars in zinc-contaminated soil
-
Macdonald C.A., Clark I.M., Hirsch P.R., Zhao F.-J., McGrath S.P. Development of a real-time PCR assay for detection and quantification of Rhizobium leguminosarum bacteria and discrimination between different biovars in zinc-contaminated soil. Appl. Environ. Microbiol. 2011, 77:4626-4633.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 4626-4633
-
-
Macdonald, C.A.1
Clark, I.M.2
Hirsch, P.R.3
Zhao, F.-J.4
McGrath, S.P.5
-
16
-
-
1842509857
-
Convenient determination of DNA extraction efficiency using an external DNA recovery standard and quantitative-competitive PCR
-
Mumy K.L., Findlay R.H. Convenient determination of DNA extraction efficiency using an external DNA recovery standard and quantitative-competitive PCR. J. Microbiol. Methods 2004, 57:259-268.
-
(2004)
J. Microbiol. Methods
, vol.57
, pp. 259-268
-
-
Mumy, K.L.1
Findlay, R.H.2
-
17
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16SrRNA
-
Muyzer G., Waal E.C.D., Uitterlinden A.G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16SrRNA. Appl. Environ. Microbiol. 1993, 59:695-700.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
Waal, E.C.D.2
Uitterlinden, A.G.3
-
18
-
-
2342655672
-
Application of real-time PCR to study effects of ammonium on population size of ammonia-oxidizing bacteria in soil
-
Okano Y., Hristova K.R., Leutenegger C.M., Jackson L.E., Denison R.F., Gebreyesus B., Lebauer D., Scow K.M. Application of real-time PCR to study effects of ammonium on population size of ammonia-oxidizing bacteria in soil. Appl. Environ. Microbiol. 2004, 70:1008-1016.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 1008-1016
-
-
Okano, Y.1
Hristova, K.R.2
Leutenegger, C.M.3
Jackson, L.E.4
Denison, R.F.5
Gebreyesus, B.6
Lebauer, D.7
Scow, K.M.8
-
19
-
-
29644443436
-
Real-time polymerase chain reaction: applications to studies on soil-borne pathogens
-
Okubara P.A., Schroeder K.L., Paulitz T.C. Real-time polymerase chain reaction: applications to studies on soil-borne pathogens. Can. J. Plant. Pathol. 2005, 27:300-313.
-
(2005)
Can. J. Plant. Pathol.
, vol.27
, pp. 300-313
-
-
Okubara, P.A.1
Schroeder, K.L.2
Paulitz, T.C.3
-
20
-
-
17244381207
-
Normalization of soil DNA extraction for accurate quantification of target genes by real-time PCR and DGGE
-
Park J.W., Crowley D.E. Normalization of soil DNA extraction for accurate quantification of target genes by real-time PCR and DGGE. Biotechniques 2005, 38:579-585.
-
(2005)
Biotechniques
, vol.38
, pp. 579-585
-
-
Park, J.W.1
Crowley, D.E.2
-
21
-
-
0036581160
-
Relative expression software tool (REST) for group-wise comparison and statistical analysis of native expression results in real-time PCR
-
Pfaffl M.W., Horgan G.W., Dempfle L. Relative expression software tool (REST) for group-wise comparison and statistical analysis of native expression results in real-time PCR. Nucleic Acids Res. 2002, 30:e36.
-
(2002)
Nucleic Acids Res.
, vol.30
-
-
Pfaffl, M.W.1
Horgan, G.W.2
Dempfle, L.3
-
22
-
-
0037208462
-
Competitive touchdown PCR for estimation of Escherichia coli DNA recovery in soil DNA extraction
-
Rose P., Harkin J.M., Hickey W.J. Competitive touchdown PCR for estimation of Escherichia coli DNA recovery in soil DNA extraction. J. Microbiol. Methods 2003, 52:29-38.
-
(2003)
J. Microbiol. Methods
, vol.52
, pp. 29-38
-
-
Rose, P.1
Harkin, J.M.2
Hickey, W.J.3
-
23
-
-
0034281455
-
Comparison of fatty acid methyl ester (FAME) methods for characterizing microbial communities
-
Schutter M.E., Dick R.P. Comparison of fatty acid methyl ester (FAME) methods for characterizing microbial communities. Soil Sci. Soc. Am. J. 2000, 64:1659-1668.
-
(2000)
Soil Sci. Soc. Am. J.
, vol.64
, pp. 1659-1668
-
-
Schutter, M.E.1
Dick, R.P.2
-
24
-
-
33847334185
-
Quantification of functional genes from procaryotes in soil by PCR
-
Sharma S., Radl V., Hai B., Kloos K., Fuka M.M., Engel M. Quantification of functional genes from procaryotes in soil by PCR. J. Microbiol. Methods 2007, 68:445-452.
-
(2007)
J. Microbiol. Methods
, vol.68
, pp. 445-452
-
-
Sharma, S.1
Radl, V.2
Hai, B.3
Kloos, K.4
Fuka, M.M.5
Engel, M.6
-
25
-
-
0036242945
-
Enumeration of 16S rDNA of Desulfotomaculum lineage 1 in rice field soil by real-time PCR with SybrGreen detection
-
Stubner S. Enumeration of 16S rDNA of Desulfotomaculum lineage 1 in rice field soil by real-time PCR with SybrGreen detection. J. Microbiol. Methods 2002, 50:155-164.
-
(2002)
J. Microbiol. Methods
, vol.50
, pp. 155-164
-
-
Stubner, S.1
-
26
-
-
0036270789
-
Microbial diversity and function in soil: from genes to ecosystems
-
Torsvik V., Øvreås L. Microbial diversity and function in soil: from genes to ecosystems. Curr. Opin. Microbiol. 2002, 5:240-245.
-
(2002)
Curr. Opin. Microbiol.
, vol.5
, pp. 240-245
-
-
Torsvik, V.1
Øvreås, L.2
-
27
-
-
0025893814
-
Rapid method for direct extraction of mRNA from seeded soils
-
Tsai Y.L., Park M.J., Olson B.H. Rapid method for direct extraction of mRNA from seeded soils. Appl. Environ. Microbiol. 1991, 57:765-768.
-
(1991)
Appl. Environ. Microbiol.
, vol.57
, pp. 765-768
-
-
Tsai, Y.L.1
Park, M.J.2
Olson, B.H.3
-
28
-
-
0028933653
-
A modified medium for efficient electrotransformation of E. coli
-
Tung W.L., Chow K.C. A modified medium for efficient electrotransformation of E. coli. Trends Genet. 1995, 11:128-129.
-
(1995)
Trends Genet.
, vol.11
, pp. 128-129
-
-
Tung, W.L.1
Chow, K.C.2
-
29
-
-
0024507215
-
Construction of mutant and chimeric genes using the polymerase chain reaction
-
Vallette F., Mege E., Reis A., Adesnik M. Construction of mutant and chimeric genes using the polymerase chain reaction. Nucleic Acids Res. 1989, 17:723-733.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 723-733
-
-
Vallette, F.1
Mege, E.2
Reis, A.3
Adesnik, M.4
-
30
-
-
0036199576
-
Simultaneous extraction from bacterioplankton of total RNA and DNA suitable for quantitative structure and function analyses
-
Weinbauer M.G., Fritz I., Wenderoth D.F., Höfle M.G. Simultaneous extraction from bacterioplankton of total RNA and DNA suitable for quantitative structure and function analyses. Appl. Environ. Microbiol. 2002, 68:1082-1087.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 1082-1087
-
-
Weinbauer, M.G.1
Fritz, I.2
Wenderoth, D.F.3
Höfle, M.G.4
-
31
-
-
0032946688
-
Fatty acid patterns of phospholipids and lipopolysaccharides in the characterisation of microbial communities in soil: a review
-
Zelles L. Fatty acid patterns of phospholipids and lipopolysaccharides in the characterisation of microbial communities in soil: a review. Biol. Fertil. Soils 1999, 29:111-129.
-
(1999)
Biol. Fertil. Soils
, vol.29
, pp. 111-129
-
-
Zelles, L.1
-
32
-
-
1542777838
-
Ethanol precipitation of DNA
-
Bethesda Research Laboratories/Life Technologies, Inc., Maryland, U.S.A.
-
Zeugin J.A., Hartley J.L. Ethanol precipitation of DNA. Focus 1985, 7 (4). Bethesda Research Laboratories/Life Technologies, Inc., Maryland, U.S.A.
-
(1985)
Focus
-
-
Zeugin, J.A.1
Hartley, J.L.2
-
34
-
-
0030609708
-
Compositional and functional shifts in microbial communities due to soil warming
-
Zogg G.P., Zak D.R., Ringelberg D.B., MacDonald N.W., Pregitzer K.S., White D.C. Compositional and functional shifts in microbial communities due to soil warming. Soil Sci. Soc. Am. J. 1997, 61:475-481.
-
(1997)
Soil Sci. Soc. Am. J.
, vol.61
, pp. 475-481
-
-
Zogg, G.P.1
Zak, D.R.2
Ringelberg, D.B.3
MacDonald, N.W.4
Pregitzer, K.S.5
White, D.C.6
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