Transcriptional control of hydrogen production during mixed carbon fermentation by hydrogenases 4 (hyf) and 3 (hyc) in Escherichia coli

Gene

Volumn 506, Issue 1, 2012, Pages 156-160

  Trchounian, Karen ^a  

^a YEREVAN STATE UNIVERSITY   (Armenia)

Author keywords

E. coli; FhlA gene; H 2 production; Hydrogenases; Mixed carbon fermentation; PH

Indexed keywords

BACTERIAL PROTEIN; CARBON; DICYCLOHEXYLCARBODIIMIDE; GLUCOSE; GLYCEROL; HYDROGEN; HYDROGENASE; HYDROGENASE 1; HYDROGENASE 2; HYDROGENASE 3; HYDROGENASE 4; MUTANT PROTEIN; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL CELL; BACTERIAL GENE; BACTERIAL GROWTH; BACTERIAL MEMBRANE; BACTERIAL METABOLISM; BACTERIAL STRAIN; BACTERIUM MUTANT; CELL ASSAY; CELL GROWTH; ENZYME ACTIVITY; ENZYME INHIBITION; ESCHERICHIA COLI; FERMENTATION; GLUCOSE ASSAY; HYDROGEN PRODUCTION; MEMBRANE STRUCTURE; NONHUMAN; OXIDATION REDUCTION POTENTIAL; PH; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; TRANSCRIPTION REGULATION; WILD TYPE;

CARBON; DICYCLOHEXYLCARBODIIMIDE; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; FERMENTATION; GENES, BACTERIAL; GLUCOSE; GLYCEROL; HYDROGEN; HYDROGENASE; MUTATION; TRANS-ACTIVATORS; TRANSCRIPTION, GENETIC;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 84864507541     PISSN: 03781119     EISSN: 18790038     Source Type: Journal    
DOI: 10.1016/j.gene.2012.06.084     Document Type: Article

References (37)

1. Andrews S.C., et al. A 12-cistron Escherichia coli operon (hyf) encoding a putative proton-translocating formate hydrogenlyase system. Microbiology 1997, 143:3633-3647.
2. 2 production by Escherichia coli at alkaline and acidic pH. FEBS Lett. 2002, 516:172-178.
3. Ballantine S.P., Boxer D.H. Isolation and characterisation of a soluble active fragment of hydrogenase isoenzyme 2 from the membranes of anaerobically grown Escherichia coli. Eur. J. Biochem. 1986, 156:277-284.
4. Cintolesi A., Comburg J.M., Rigou V., Zygourakis K., Gonzalez R. Quantitative analysis of the fermentative metabolism of glycerol in Escherichia coli. Biotechnol. Bioeng. 2011, 109:187-198.
5. Dharmadi Y., Murarka A., Gonzalez R. Anaerobic fermentation of glycerol by Escherichia coli: a new platform for metabolic engineering. Biotechnol. Bioeng. 2006, 94:821-829.
6. Eltsova Z.A., Vasilieva L.G., Tsygankov A.A. Hydrogen production by recombinant strains of Rhodobacter sphaeroides using a modified photosynthetic apparatus. Appl. Biochem. Microbiol. 2010, 46:487-491.
7. Francis K., Patel P., Wendt J.C., Shanmugam K.T. Purification and characterization of two forms of hydrogenase 1 from Escheriochia coli. J. Bacteriol. 1990, 172:5750-5757.
8. Gabrielyan L., Trchounian A. Concentration dependent glycine effect on the photosynthetic growth and bio-hydrogen production by Rhodobacter sphaeroides from mineral springs. Biomass Bioenergy 2012, 36:333-338.
9. Hakobyan L., Gabrielyan L., Trchounian A. Yeast extract as an effective nitrogen source stimulating cell growth and enhancing hydrogen photoproduction by Rhodobacter sphaeroides strains from mineral springs. Int. J. Hydrogen Energy 2012, 37:6519-6526.
10. Hallenbeck P.C. Fermentative hydrogen production: principles, progress, and prognosis. Int. J. Hydrogen Energy 2009, 34:7379-7389.
11. Hu H., Wood T.K. An evolved Escherichia coli strain for producing hydrogen and ethanol from glycerol. Biochem. Biophys. Res. Commun. 2010, 391:1033-1038.
12. Khanna S., Goya l.A., Moholkar V.S. Microbial conversion of glycerol: present status and future prospects. Crit. Rev. Biotechnol. 2011, (Epub Sep 27). 10.3109/07388551.2011.604839.
13. King P.W., Przybyla A.E. Response of hya expression to external pH in Escherichia coli. J. Bacteriol. 1999, 181:5250-5256.
14. Korsa I., Bock A. Characterization of fhlA mutations resulting in ligand-independent transcriptional activation and ATP hydrolysis. J. Bacteriol. 1997, 179:41-45.
15. Lukey M.J., et al. How Escherichia coli is equipped to oxidize hydrogen under different redox conditions. J. Biol. Chem. 2010, 285:3928-3938.
16. Maeda T., Sanchez-Torres V., Wood T.K. Escherichia coli hydrogenase 3 is a reversible enzyme possessing hydrogen uptake and synthesis activities. Appl. Microbiol. Biotechnol. 2007, 76:1036-1042.
17. Menon N.K., et al. Cloning, sequencing, and mutational analysis of the hyb operon encoding Escherichia coli hydrogenase 2. J. Bacteriol. 1994, 176:4416-4423.
18. Menon N.K., Robbins J., Wendt J.C., Shanmugam K.T., Przybyla A.E. Mutational analysis and characterization of the Escherichia coli hya operon, which encodes [NiFe] hydrogenase 1. J. Bacteriol. 1991, 173:4851-4861.
19. Mnatsakanyan N., Bagramyan K., Trchounian A. Hydrogenase 3 but not hydrogenase 4 is major in hydrogen gas production by Escherichia coli formate hydrogenlyase ar acidic pH and in the presence of external formate. Cell Biochem. Biophys. 2004, 41:357-366.
20. Noguchi K., Riggins D.P., Eldahan K.C., Kitko R.D., Slonczewski J.L. Hydrogenase-3 contributes to anaerobic acid resistance of Escherichia coli. PLoS One 2010, 5:e10132.
21. Piskarev I.M., Ushkanov V.A., Aristova N.A., Likhachev P.P., Myslivets T.S. Establishment of the redox potential of water saturated with hydrogen. Biophysics 2010, 55:13-17.
22. Poladyan A., Trchounian A. Production of molecular hydrogen by mixed-acid fermentation in bacteria and its energetics. Ultrastructure, Bioelectrochemsitry, Bioenergetics and Biophysics 2009, 197-231. Research Signpost, Kerala (India). A. Trchounian (Ed.).
23. Redwood M.D., Mikheenko I.P., Sargent F., Macaskie L.E. Dissecting the roles of Escherichia coli hydrogenases in biohydrogen production. FEMS Microbiol. Lett. 2008, 278:48-55.
24. Richard D.J., Sawers G., Sargent F., McWalter L., Boxer D.H. Transcriptional regulation in response to oxygen and nitrate of the operons encoding the [NiFe] hydrogenases 1 and 2 of Escherichia coli. Microbiology 1999, 145:2903-2912.
25. Sauter M., Bohm R., Bock A. Mutational analysis of the operon (hyc) determining hydrogenase 3 formation in Escherichia coli. Mol. Microbiol. 1992, 6:1523-1532.
26. Schlensog V., Lutz S., Bock A. Purification and DNA-binding properties of FHLA, the transcriptional activator of the formate hydrogenlyase system from Escherichia coli. J. Biol. Chem. 1994, 269:19590-19596.
27. Self W.T., Hasona A., Shanmugam K.T. Expression and regulation of silent operon, hyf, coding for hydrogenase 4 isoenzyme in Escherichia coli. J. Bacteriol. 2004, 186:580-587.
28. Self W.T., Shanmugam K.T. Isolation and characterization of mutated FhlA proteins which activate transcription of the hyc operon (formate hydrogenlyase) of Escherichia coli in the absence of molybdate. FEMS Microbiol. Lett. 2000, 184:47-52.
29. 54-dependent transcriptional activators FhlA and HyfR. J. Bacteriol. 2002, 184:6642-6653.
30. 1-ATP synthase and its association with solute secondary transporters and/or enzymes of anaerobic oxidation-reduction under fermentation. Biochem. Biophys. Res. Commun. 2004, 315:1051-1057.
31. Trchounian K., Pinske C., Sawers G., Trchounian A. Characterization of Escherichia coli [NiFe]-hydrogenase distribution during fermentative growth at different pHs. Cell Biochem. Biophys. 2012, 62:433-440.
32. 1-ATP synthase for the activities of the hydrogen-oxidizing hydrogenases 1 and 2 during glucose and glycerol fermentation at high and low pH in Escherichia coli. J. Bioenerg. Biomembr. 2011, 43:645-650.
33. Trchounian K., Poladyan A., Trchounian A. Relation of potassium uptake to proton transport and activity of hydrogenases in Escherichia coli, grown at a low pH. Biochemistry (Moscow): A. Membr. Cell Biol. 2009, 3:144-150.
34. 1-ATPase. Crit. Rev. Biochem. Mol. Biol. 2012, 47:236-249.
35. 2 production under glycerol fermentation at a low pH. Int. J. Hydrogen Energy 2011, 36:4323-4331.
36. 2 production by Escherichia coli under glycerol fermentation at neutral and slightly alkaline pH. Int. J. Hydrogen Energy 2009, 34:8839-8845.
37. 2 in Salmonella enterica serovar typhimurium. Appl. Environ. Microbiol. 2009, 75:1456-1459.