-
1
-
-
0033982936
-
KEGG: kyoto encyclopedia of genes and genomes
-
Kanehisa M, Goto S, ((2000)) KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Research 28:: 27--30.
-
(2000)
Nucleic Acids Research
, vol.28
, pp. 27-30
-
-
Kanehisa, M.1
Goto, S.2
-
2
-
-
78549251736
-
Analysing biological pathways in genome-wide association studies
-
Wang K, Li M, Hakonarson H, ((2010)) Analysing biological pathways in genome-wide association studies. Nature Reviews, Genetics 11:: 843--854.
-
(2010)
Nature Reviews, Genetics
, vol.11
, pp. 843-854
-
-
Wang, K.1
Li, M.2
Hakonarson, H.3
-
3
-
-
36249029788
-
Pathway-based approaches for analysis of genomewide association studies
-
Wang K, Li M, Bucan M, ((2007)) Pathway-based approaches for analysis of genomewide association studies. The American Journal of Human Genetics 81:: 1278--1283.
-
(2007)
The American Journal of Human Genetics
, vol.81
, pp. 1278-1283
-
-
Wang, K.1
Li, M.2
Bucan, M.3
-
4
-
-
58149253310
-
On the utility of gene set methods in genomewide association studies of quantitative traits
-
Chasman DI, ((2008)) On the utility of gene set methods in genomewide association studies of quantitative traits. Genetic Epidemiology 32:: 658--668.
-
(2008)
Genetic Epidemiology
, vol.32
, pp. 658-668
-
-
Chasman, D.I.1
-
5
-
-
58349112341
-
Prioritizing risk pathways: a novel association approach to searching for disease pathways fusing SNPs and pathways
-
Chen L, Zhang L, Zhao Y, Xu L, Shang Y, et al. ((2009)) Prioritizing risk pathways: a novel association approach to searching for disease pathways fusing SNPs and pathways. Bioinformatics 25:: 237--242.
-
(2009)
Bioinformatics
, vol.25
, pp. 237-242
-
-
Chen, L.1
Zhang, L.2
Zhao, Y.3
Xu, L.4
Shang, Y.5
-
6
-
-
67651053605
-
Pathway analysis by adaptive combination of P-values
-
Yu K, Li Q, Bergen AW, Pfeiffer RM, Rosenberg PS, et al. ((2009)) Pathway analysis by adaptive combination of P-values. Genetic Epidemiology 33:: 700--709.
-
(2009)
Genetic Epidemiology
, vol.33
, pp. 700-709
-
-
Yu, K.1
Li, Q.2
Bergen, A.W.3
Pfeiffer, R.M.4
Rosenberg, P.S.5
-
7
-
-
67649584052
-
Gene ontology analysis of GWA study data sets provides insights into the biology of bipolar disorder
-
Holmans P, Green EK, Pahwa JS, Ferreira MAR, Purcell SM, et al. ((2009)) Gene ontology analysis of GWA study data sets provides insights into the biology of bipolar disorder. The American Journal of Human Genetics 85:: 13--24.
-
(2009)
The American Journal of Human Genetics
, vol.85
, pp. 13-24
-
-
Holmans, P.1
Green, E.K.2
Pahwa, J.S.3
Ferreira, M.A.R.4
Purcell, S.M.5
-
8
-
-
70349991890
-
The SNP ratio test: pathway analysis of genome-wide association datasets
-
O'Dushlaine C, Kenny E, Heron EA, Segurado R, Gill M, et al. ((2009)) The SNP ratio test: pathway analysis of genome-wide association datasets. Bioinformatics 25:: 2762--2763.
-
(2009)
Bioinformatics
, vol.25
, pp. 2762-2763
-
-
O'Dushlaine, C.1
Kenny, E.2
Heron, E.A.3
Segurado, R.4
Gill, M.5
-
9
-
-
71249124573
-
Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16
-
Tintle N, Borchers B, Brown M, Bekmetjev A, ((2009)) Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16. BMC Proceedings 3:: S96.
-
(2009)
BMC Proceedings
, vol.3
-
-
Tintle, N.1
Borchers, B.2
Brown, M.3
Bekmetjev, A.4
-
10
-
-
77954300600
-
GSA-SNP: a general approach for gene set analysis of polymorphisms
-
Nam D, Kim J, Kim SY, Kim S, ((2010)) GSA-SNP: a general approach for gene set analysis of polymorphisms. Nucleic Acids Research 38:: W749--W754.
-
(2010)
Nucleic Acids Research
, vol.38
-
-
Nam, D.1
Kim, J.2
Kim, S.Y.3
Kim, S.4
-
11
-
-
77958614226
-
Self-contained gene-set analysis of expression data: An evaluation of existing and novel methods
-
Fridley BL, Jenkins GD, Biernacka JM, ((2010)) Self-contained gene-set analysis of expression data: An evaluation of existing and novel methods. PLoS One 5:: e12693.
-
(2010)
PLoS One
, vol.5
-
-
Fridley, B.L.1
Jenkins, G.D.2
Biernacka, J.M.3
-
12
-
-
34249663294
-
Analyzing gene expression data in terms of gene sets: methodological issues
-
Goeman JJ, Buhlmann P, ((2007)) Analyzing gene expression data in terms of gene sets: methodological issues. Bioinformatics 23:: 980--987.
-
(2007)
Bioinformatics
, vol.23
, pp. 980-987
-
-
Goeman, J.J.1
Buhlmann, P.2
-
13
-
-
0344826563
-
Rank truncated product of P-values, with application to genomewide association scans
-
Dudbridge F, Koeleman BP, ((2003)) Rank truncated product of P-values, with application to genomewide association scans. Genetic Epidemiology 25:: 360--366.
-
(2003)
Genetic Epidemiology
, vol.25
, pp. 360-366
-
-
Dudbridge, F.1
Koeleman, B.P.2
-
14
-
-
33645556520
-
A tail strength measure for assessing the overall univariate significance in a dataset
-
Taylor J, Tibshirani R, ((2006)) A tail strength measure for assessing the overall univariate significance in a dataset. Biostatistics 7:: 167--181.
-
(2006)
Biostatistics
, vol.7
, pp. 167-181
-
-
Taylor, J.1
Tibshirani, R.2
-
15
-
-
0345832338
-
A global test for groups of genes: testing association with a clinical outcome
-
Goeman JJ, van de Geer SA, de Kort F, van Houwelingen HC, ((2004)) A global test for groups of genes: testing association with a clinical outcome. Bioinformatics 20:: 93--99.
-
(2004)
Bioinformatics
, vol.20
, pp. 93-99
-
-
Goeman, J.J.1
van de Geer, S.A.2
de Kort, F.3
van Houwelingen, H.C.4
-
16
-
-
66249135302
-
A critical evaluation of genomic control methods for genetic association studies
-
Dadd T, Weale ME, Lewis CM, ((2009)) A critical evaluation of genomic control methods for genetic association studies. Genetic Epidemiology 33:: 290--298.
-
(2009)
Genetic Epidemiology
, vol.33
, pp. 290-298
-
-
Dadd, T.1
Weale, M.E.2
Lewis, C.M.3
-
17
-
-
33646694298
-
Confounding from cryptic relatedness in case-control association studies
-
Voight BF, Pritchard JK, ((2005)) Confounding from cryptic relatedness in case-control association studies. PLoS Genetics 1:: e32.
-
(2005)
PLoS Genetics
, vol.1
-
-
Voight, B.F.1
Pritchard, J.K.2
-
18
-
-
0032795012
-
EPIC-Norfolk: study design and characteristics of the cohort. European Prospective Investigation of Cancer
-
Day N, Oakes S, Luben R, Khaw K, Bingham S, et al. ((1999)) EPIC-Norfolk: study design and characteristics of the cohort. European Prospective Investigation of Cancer. British Journal of Cancer 80:: 95--103.
-
(1999)
British Journal of Cancer
, vol.80
, pp. 95-103
-
-
Day, N.1
Oakes, S.2
Luben, R.3
Khaw, K.4
Bingham, S.5
-
19
-
-
34447648369
-
Mapping the platelet profile for functional genomic studies and demonstration of the effect size of the GP6 locus
-
Jones CI, Garner SF, AngenentW, Bernard A, Berzuini C, et al. ((2007)) Mapping the platelet profile for functional genomic studies and demonstration of the effect size of the GP6 locus. Journal of Thrombosis and Haemostatisis 5:: 1756--1765.
-
(2007)
Journal of Thrombosis and Haemostatisis
, vol.5
, pp. 1756-1765
-
-
Jones, C.I.1
Garner, S.F.2
Angenent, W.3
Bernard, A.4
Berzuini, C.5
-
20
-
-
67849089161
-
A functional genomics approach reveals novel quantitative trait loci associated with platelet signaling pathways
-
Jones CI, Bray S, Garner SF, Stephens J, de Bono B, et al. ((2009)) A functional genomics approach reveals novel quantitative trait loci associated with platelet signaling pathways. Blood 114:: 1405--1416.
-
(2009)
Blood
, vol.114
, pp. 1405-1416
-
-
Jones, C.I.1
Bray, S.2
Garner, S.F.3
Stephens, J.4
de Bono, B.5
-
21
-
-
51749119425
-
Analysis of multiple SNPs in a candidate gene or region
-
Chapman J, Whittaker JC, ((2008)) Analysis of multiple SNPs in a candidate gene or region. Genetic Epidemiology 32:: 560--566.
-
(2008)
Genetic Epidemiology
, vol.32
, pp. 560-566
-
-
Chapman, J.1
Whittaker, J.C.2
-
22
-
-
70149101114
-
Using genome-wide pathway analysis to unravel the etiology of complex diseases
-
Elbers CC, van Eijk KR, Franke L, Mulder F, van der Schouw YT, et al. ((2009)) Using genome-wide pathway analysis to unravel the etiology of complex diseases. Genetic Epidemiology 33:: 419--431.
-
(2009)
Genetic Epidemiology
, vol.33
, pp. 419-431
-
-
Elbers, C.C.1
van Eijk, K.R.2
Franke, L.3
Mulder, F.4
van der Schouw, Y.T.5
-
23
-
-
0041530047
-
Resampling-based multiple testing for microarray data analysis
-
Ge Y, Dudoit S, Speed TP, ((2003)) Resampling-based multiple testing for microarray data analysis. Test 12:: 1--44.
-
(2003)
Test
, vol.12
, pp. 1-44
-
-
Ge, Y.1
Dudoit, S.2
Speed, T.P.3
-
24
-
-
58149177166
-
Reactome knowledgebase of human biological pathways and processes
-
Matthews L, Gopinath G, Gillespie M, Caudy M, Croft D, et al. ((2009)) Reactome knowledgebase of human biological pathways and processes. Nucleic Acids Research 37:: D619--D622.
-
(2009)
Nucleic Acids Research
, vol.37
-
-
Matthews, L.1
Gopinath, G.2
Gillespie, M.3
Caudy, M.4
Croft, D.5
-
25
-
-
78651275182
-
Reactome: a database of reactions, pathways and biological processes
-
Croft D, O'Kelly G, Wu G, Haw R, Gillespie M, et al. ((2011)) Reactome: a database of reactions, pathways and biological processes. Nucleic Acids Research 39:: D691--D697.
-
(2011)
Nucleic Acids Research
, vol.39
-
-
Croft, D.1
O'Kelly, G.2
Wu, G.3
Haw, R.4
Gillespie, M.5
-
26
-
-
78649912197
-
Biological pathway-based genome-wide association analysis indentified the vasoactive intestinal peptide (VIP) patwhay important for obesity
-
Liu YJ, Guo YF, Zhang LS, Pei YF, Yu N, et al. ((2010)) Biological pathway-based genome-wide association analysis indentified the vasoactive intestinal peptide (VIP) patwhay important for obesity. Obesity 18:: 2339--2346.
-
(2010)
Obesity
, vol.18
, pp. 2339-2346
-
-
Liu, Y.J.1
Guo, Y.F.2
Zhang, L.S.3
Pei, Y.F.4
Yu, N.5
-
27
-
-
69949121284
-
Asymptotic tests of association with multiple SNPs in linkage disequilibrium
-
PanW
-
PanW ((2009)) Asymptotic tests of association with multiple SNPs in linkage disequilibrium. Genetic Epidemiology 33:: 497--507.
-
(2009)
Genetic Epidemiology
, vol.33
, pp. 497-507
-
-
-
28
-
-
33847451999
-
Testing the equality of two independent binomial proportions
-
Little RJA, ((1989)) Testing the equality of two independent binomial proportions. The American Statistician 43:: 283--288.
-
(1989)
The American Statistician
, vol.43
, pp. 283-288
-
-
Little, R.J.A.1
-
29
-
-
78651024973
-
The combination of probabilities arising from data in discrete distributions
-
Lancaster HO, ((1949)) The combination of probabilities arising from data in discrete distributions. Biometrica 36:: 370--382.
-
(1949)
Biometrica
, vol.36
, pp. 370-382
-
-
Lancaster, H.O.1
|